RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SMAP1Q8IYB5 467 aaPredicted RBP18.51■□□□□ 0.55
SNX17-204ENST00000453453 ZBED3Q96IU2 234 aaPredicted RBP18.51■□□□□ 0.55
SNX17-204ENST00000453453 TMEM87BQ96K49 555 aa18.51■□□□□ 0.55
SNX17-204ENST00000453453 MKNK2Q9HBH9 465 aa18.51■□□□□ 0.55
SNX17-204ENST00000453453 COL2A1P02458 1487 aaPredicted RBP18.51■□□□□ 0.55
SNX17-204ENST00000453453 CLRN2A0PK11 232 aa18.5■□□□□ 0.55
SNX17-204ENST00000453453 RANBP6O60518 1105 aaKnown RBP18.5■□□□□ 0.55
SNX17-204ENST00000453453 LMOD1P29536 600 aaPredicted RBP18.5■□□□□ 0.55
SNX17-204ENST00000453453 TCP10Q12799 353 aa18.5■□□□□ 0.55
SNX17-204ENST00000453453 DPY19L2Q6NUT2 758 aa18.5■□□□□ 0.55
SNX17-204ENST00000453453 ZSCAN29Q8IWY8 852 aaPredicted RBP18.5■□□□□ 0.55
SNX17-204ENST00000453453 MTA3Q9BTC8 594 aa18.5■□□□□ 0.55
SNX17-204ENST00000453453 VEZTQ9HBM0 779 aa18.5■□□□□ 0.55
SNX17-204ENST00000453453 GPRC5DQ9NZD1 345 aa18.5■□□□□ 0.55
SNX17-204ENST00000453453 FAM198AQ9UFP1 575 aa18.5■□□□□ 0.55
SNX17-204ENST00000453453 TAOK2Q9UL54 1235 aa18.5■□□□□ 0.55
SNX17-204ENST00000453453 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNX17-204ENST00000453453 ERICH2A1L162 156 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 WNT10BO00744 389 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 LETM1O95202 739 aaPredicted RBP18.49■□□□□ 0.55
SNX17-204ENST00000453453 TNNI2P48788 182 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 PLCD1P51178 756 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 PKP1Q13835 747 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 KIF4BQ2VIQ3 1234 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 RBM26Q5T8P6 1007 aaKnown RBP18.49■□□□□ 0.55
SNX17-204ENST00000453453 C16orf86Q6ZW13 317 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 CHST3Q7LGC8 479 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 TMEM87AQ8NBN3 555 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 TMX3Q96JJ7 454 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 TRIM34Q9BYJ4 488 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 LRRC2Q9BYS8 371 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 INCENPQ9NQS7 918 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 SH2B1Q9NRF2 756 aaPredicted RBP18.49■□□□□ 0.55
SNX17-204ENST00000453453 SHTN1A0MZ66 631 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 PRDM1O75626 825 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 ANTXR2P58335 489 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 TNFAIP1Q13829 316 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 COL9A3Q14050 684 aaPredicted RBP18.49■□□□□ 0.55
SNX17-204ENST00000453453 TOB2Q14106 344 aaPredicted RBP18.49■□□□□ 0.55
SNX17-204ENST00000453453 CYB5R4Q7L1T6 521 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 IQCA1Q86XH1 822 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 FBXL16Q8N461 479 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 BRF1Q92994 677 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 ZSWIM5Q9P217 1185 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 SWAP70Q9UH65 585 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 TACC3Q9Y6A5 838 aa18.49■□□□□ 0.55
SNX17-204ENST00000453453 SYCE3A1L190 88 aa18.48■□□□□ 0.55
SNX17-204ENST00000453453 TCP10L2B9ZVM9 353 aa18.48■□□□□ 0.55
SNX17-204ENST00000453453 HMGN5P82970 282 aaKnown RBP18.48■□□□□ 0.55
SNX17-204ENST00000453453 NBPF9Q3BBW0 867 aa18.48■□□□□ 0.55
SNX17-204ENST00000453453 TBC1D10BQ4KMP7 808 aaPredicted RBP18.48■□□□□ 0.55
SNX17-204ENST00000453453 ZNF444Q8N0Y2 327 aaPredicted RBP18.48■□□□□ 0.55
SNX17-204ENST00000453453 CRACR2BQ8N4Y2 399 aaPredicted RBP18.48■□□□□ 0.55
SNX17-204ENST00000453453 DYNLL2Q96FJ2 89 aa18.48■□□□□ 0.55
SNX17-204ENST00000453453 EHD4Q9H223 541 aa18.48■□□□□ 0.55
SNX17-204ENST00000453453 RBM27Q9P2N5 1060 aaKnown RBP18.48■□□□□ 0.55
SNX17-204ENST00000453453 SERPINB13Q9UIV8 391 aa18.48■□□□□ 0.55
SNX17-204ENST00000453453 ATRNL1Q5VV63 1379 aa18.47■□□□□ 0.55
SNX17-204ENST00000453453 SMIM22K7EJ46 135 aa18.47■□□□□ 0.55
SNX17-204ENST00000453453 IFIT3O14879 490 aaKnown RBP18.47■□□□□ 0.55
SNX17-204ENST00000453453 DDNO94850 711 aaPredicted RBP18.47■□□□□ 0.55
SNX17-204ENST00000453453 CDK8P49336 464 aa18.47■□□□□ 0.55
SNX17-204ENST00000453453 EVX2Q03828 476 aa18.47■□□□□ 0.55
SNX17-204ENST00000453453 TMEM67Q5HYA8 995 aa18.47■□□□□ 0.55
SNX17-204ENST00000453453 SAMD7Q7Z3H4 446 aa18.47■□□□□ 0.55
SNX17-204ENST00000453453 FAM83AQ86UY5 434 aa18.47■□□□□ 0.55
SNX17-204ENST00000453453 FAM151AQ8WW52 585 aa18.47■□□□□ 0.55
SNX17-204ENST00000453453 AGXT2Q9BYV1 514 aa18.47■□□□□ 0.55
SNX17-204ENST00000453453 PI4KBQ9UBF8 816 aa18.47■□□□□ 0.55
SNX17-204ENST00000453453 ANGEL1Q9UNK9 670 aaKnown RBP18.47■□□□□ 0.55
SNX17-204ENST00000453453 TSPY2A6NKD2 308 aa18.46■□□□□ 0.55
SNX17-204ENST00000453453 CCDC178Q5BJE1 867 aa18.46■□□□□ 0.55
SNX17-204ENST00000453453 SH2B2O14492 632 aaPredicted RBP18.45■□□□□ 0.54
SNX17-204ENST00000453453 NFXL1Q6ZNB6 911 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 ZFPM1Q8IX07 1006 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 TMTC2Q8N394 836 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 MYRIPQ8NFW9 859 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 CHMP4CQ96CF2 233 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 LARP6Q9BRS8 491 aaKnown RBP18.45■□□□□ 0.54
SNX17-204ENST00000453453 TPCN1Q9ULQ1 816 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 NAP1L2Q9ULW6 460 aaPredicted RBP18.45■□□□□ 0.54
SNX17-204ENST00000453453 WDR33Q9C0J8 1336 aaKnown RBP18.45■□□□□ 0.54
SNX17-204ENST00000453453 TSPY3P0CV98 308 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 TSPY8P0CW00 308 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 GTF2F1P35269 517 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNX17-204ENST00000453453 APOBRQ0VD83 1088 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 WTAPQ15007 396 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 FOXP4Q8IVH2 680 aaPredicted RBP18.45■□□□□ 0.54
SNX17-204ENST00000453453 ZSCAN10Q96SZ4 725 aaPredicted RBP18.45■□□□□ 0.54
SNX17-204ENST00000453453 SIPA1L1O43166 1804 aa18.45■□□□□ 0.54
SNX17-204ENST00000453453 DDTLA6NHG4 134 aaPredicted RBP18.44■□□□□ 0.54
SNX17-204ENST00000453453 CCDC69A6NI79 296 aa18.44■□□□□ 0.54
SNX17-204ENST00000453453 LIFRP42702 1097 aa18.44■□□□□ 0.54
SNX17-204ENST00000453453 TFAP4Q01664 338 aa18.44■□□□□ 0.54
SNX17-204ENST00000453453 GABPAQ06546 454 aa18.44■□□□□ 0.54
SNX17-204ENST00000453453 FAM47AQ5JRC9 791 aa18.44■□□□□ 0.54
SNX17-204ENST00000453453 APOBEC3FQ8IUX4 373 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 251.3 ms