RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 MKNK2Q9HBH9 465 aa14.11□□□□□ -0.15
LINC00339-205ENST00000452322 GINM1Q9NU53 330 aa14.11□□□□□ -0.15
LINC00339-205ENST00000452322 SNCAIPQ9Y6H5 919 aa14.11□□□□□ -0.15
LINC00339-205ENST00000452322 ATAD5Q96QE3 1844 aa14.11□□□□□ -0.15
LINC00339-205ENST00000452322 ORC4O43929 436 aa14.1□□□□□ -0.15
LINC00339-205ENST00000452322 ASNSP08243 561 aa14.1□□□□□ -0.15
LINC00339-205ENST00000452322 HSPA6P17066 643 aa14.1□□□□□ -0.15
LINC00339-205ENST00000452322 RASA1P20936 1047 aa14.1□□□□□ -0.15
LINC00339-205ENST00000452322 NT5C2P49902 561 aa14.1□□□□□ -0.15
LINC00339-205ENST00000452322 RNF20Q5VTR2 975 aa14.1□□□□□ -0.15
LINC00339-205ENST00000452322 MFSD6Q6ZSS7 791 aa14.1□□□□□ -0.15
LINC00339-205ENST00000452322 RASSF10A6NK89 507 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 SLC27A2O14975 620 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 PRDM1O75626 825 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 GDF11O95390 407 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 ABCB5Q2M3G0 1257 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 CREB3L3Q68CJ9 461 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 RGMBQ6NW40 437 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 ZNF444Q8N0Y2 327 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-205ENST00000452322 CLMNQ96JQ2 1002 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 CABP5Q9NP86 173 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 PICK1Q9NRD5 415 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 ZBTB21Q9ULJ3 1066 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 TACC3Q9Y6A5 838 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 SPDYE5A6NIY4 337 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 AKR1B1P15121 316 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 HSPA4P34932 840 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 TMEM179Q6ZVK1 233 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 SLC10A4Q96EP9 437 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 USP26Q9BXU7 913 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 CNNM2Q9H8M5 875 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 ELP3Q9H9T3 547 aa14.09□□□□□ -0.15
LINC00339-205ENST00000452322 PLIN4Q96Q06 1357 aa14.08□□□□□ -0.15
LINC00339-205ENST00000452322 GREB1LQ9C091 1923 aaPredicted RBP14.08□□□□□ -0.16
LINC00339-205ENST00000452322 NEDD4P46934 1319 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 MPHOSPH10O00566 681 aaKnown RBP14.08□□□□□ -0.16
LINC00339-205ENST00000452322 GH2P01242 217 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 PTPRAP18433 802 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 MCCP23508 829 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 ZNF157P51786 506 aaPredicted RBP14.08□□□□□ -0.16
LINC00339-205ENST00000452322 JAG1P78504 1218 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 PPATQ06203 517 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 DEFB115Q30KQ5 88 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 ERO1BQ86YB8 467 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 KCNB2Q92953 911 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 TBC1D2Q9BYX2 928 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 KRT23Q9C075 422 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 INCENPQ9NQS7 918 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 TOMM22Q9NS69 142 aa14.08□□□□□ -0.16
LINC00339-205ENST00000452322 TSPY2A6NKD2 308 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 USP17L5A8MUK1 530 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 E7EWF7 191 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 RANBP6O60518 1105 aaKnown RBP14.07□□□□□ -0.16
LINC00339-205ENST00000452322 SEC24BO95487 1268 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 TSPY3P0CV98 308 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 TSPY8P0CW00 308 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 ZKSCAN1P17029 563 aaPredicted RBP14.07□□□□□ -0.16
LINC00339-205ENST00000452322 GUCY1A2P33402 732 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 TRDNQ13061 729 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 SHROOM1Q2M3G4 852 aaPredicted RBP14.07□□□□□ -0.16
LINC00339-205ENST00000452322 TSGA10IPQ3SY00 556 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 RRP12Q5JTH9 1297 aaKnown RBP14.07□□□□□ -0.16
LINC00339-205ENST00000452322 RASAL3Q86YV0 1011 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 NEDD1Q8NHV4 660 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 ESR2Q92731 530 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 CCDC102AQ96A19 550 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 OPTNQ96CV9 577 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 TAF6LQ9Y6J9 622 aa14.07□□□□□ -0.16
LINC00339-205ENST00000452322 PHIPQ8WWQ0 1821 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 SLC10A3P09131 477 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 ZBTB48P10074 688 aaPredicted RBP14.06□□□□□ -0.16
LINC00339-205ENST00000452322 HTRA3P83110 453 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 TFAP4Q01664 338 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 PPIL2Q13356 520 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 SEPT2Q15019 361 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 RAB3GAP1Q15042 981 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 FAM47AQ5JRC9 791 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 STOX1Q6ZVD7 989 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 NCOA7Q8NI08 942 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 WNK4Q96J92 1243 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.06□□□□□ -0.16
LINC00339-205ENST00000452322 AS3MTQ9HBK9 375 aa14.06□□□□□ -0.16
LINC00339-205ENST00000452322 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.06□□□□□ -0.16
LINC00339-205ENST00000452322 IGKV6D-41A0A0C4DH26 115 aa14.05□□□□□ -0.16
LINC00339-205ENST00000452322 FAM155AB1AL88 458 aaPredicted RBP14.05□□□□□ -0.16
LINC00339-205ENST00000452322 B4E1Z4 1266 aa14.05□□□□□ -0.16
LINC00339-205ENST00000452322 ECE1P42892 770 aa14.05□□□□□ -0.16
LINC00339-205ENST00000452322 KRT32Q14532 448 aa14.05□□□□□ -0.16
LINC00339-205ENST00000452322 SPRYD7Q5W111 196 aa14.05□□□□□ -0.16
LINC00339-205ENST00000452322 PAXIP1Q6ZW49 1069 aaPredicted RBP14.05□□□□□ -0.16
LINC00339-205ENST00000452322 RALYLQ86SE5 291 aaKnown RBP14.05□□□□□ -0.16
LINC00339-205ENST00000452322 RASEFQ8IZ41 740 aa14.05□□□□□ -0.16
LINC00339-205ENST00000452322 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
LINC00339-205ENST00000452322 WDR18Q9BV38 432 aa14.05□□□□□ -0.16
LINC00339-205ENST00000452322 KANSL2Q9H9L4 492 aa14.05□□□□□ -0.16
LINC00339-205ENST00000452322 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.05□□□□□ -0.16
LINC00339-205ENST00000452322 ZHX2Q9Y6X8 837 aa14.05□□□□□ -0.16
LINC00339-205ENST00000452322 IRF6O14896 467 aa14.04□□□□□ -0.16
LINC00339-205ENST00000452322 KDM4AO75164 1064 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms