RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 AS3MTQ9HBK9 375 aa15.14■□□□□ 0.01
CPSF4-208ENST00000452047 GINM1Q9NU53 330 aa15.14■□□□□ 0.01
CPSF4-208ENST00000452047 ZBTB21Q9ULJ3 1066 aa15.14■□□□□ 0.01
CPSF4-208ENST00000452047 ZNF532Q9HCE3 1301 aa15.14■□□□□ 0.01
CPSF4-208ENST00000452047 MAGEB6P1A0A0J9YX57 407 aa15.13■□□□□ 0.01
CPSF4-208ENST00000452047 FMNL1O95466 1100 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-208ENST00000452047 FCGRTP55899 365 aa15.13■□□□□ 0.01
CPSF4-208ENST00000452047 BACE1P56817 501 aa15.13■□□□□ 0.01
CPSF4-208ENST00000452047 MTMR2Q13614 643 aa15.13■□□□□ 0.01
CPSF4-208ENST00000452047 HAUS7Q99871 368 aa15.13■□□□□ 0.01
CPSF4-208ENST00000452047 BOLA2Q9H3K6 86 aa15.13■□□□□ 0.01
CPSF4-208ENST00000452047 PAG1Q9NWQ8 432 aa15.13■□□□□ 0.01
CPSF4-208ENST00000452047 SERPINB13Q9UIV8 391 aa15.13■□□□□ 0.01
CPSF4-208ENST00000452047 PNMA3Q9UL41 463 aa15.13■□□□□ 0.01
CPSF4-208ENST00000452047 MYPNQ86TC9 1320 aa15.13■□□□□ 0.01
CPSF4-208ENST00000452047 DOCK3Q8IZD9 2030 aa15.12■□□□□ 0.01
CPSF4-208ENST00000452047 SMARCA5O60264 1052 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-208ENST00000452047 HOXD10P28358 340 aa15.12■□□□□ 0.01
CPSF4-208ENST00000452047 PLCD1P51178 756 aa15.12■□□□□ 0.01
CPSF4-208ENST00000452047 PRKCZQ05513 592 aa15.12■□□□□ 0.01
CPSF4-208ENST00000452047 FAM110CQ1W6H9 321 aa15.12■□□□□ 0.01
CPSF4-208ENST00000452047 ANKRD13CQ8N6S4 541 aa15.12■□□□□ 0.01
CPSF4-208ENST00000452047 ASCC2Q9H1I8 757 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-208ENST00000452047 BAZ2AQ9UIF9 1905 aaKnown RBP15.11■□□□□ 0.01
CPSF4-208ENST00000452047 EN2P19622 333 aaPredicted RBP15.11■□□□□ 0.01
CPSF4-208ENST00000452047 ADD2P35612 726 aa15.11■□□□□ 0.01
CPSF4-208ENST00000452047 PABPC4Q13310 644 aaKnown RBP eCLIP15.11■□□□□ 0.01
CPSF4-208ENST00000452047 SLFNL1Q499Z3 407 aa15.11■□□□□ 0.01
CPSF4-208ENST00000452047 TTC6Q86TZ1 520 aa15.11■□□□□ 0.01
CPSF4-208ENST00000452047 LCORLQ8N3X6 602 aa15.11■□□□□ 0.01
CPSF4-208ENST00000452047 CRNKL1Q9BZJ0 848 aaKnown RBP15.11■□□□□ 0.01
CPSF4-208ENST00000452047 DCTPP1Q9H773 170 aa15.11■□□□□ 0.01
CPSF4-208ENST00000452047 GABRQQ9UN88 632 aa15.11■□□□□ 0.01
CPSF4-208ENST00000452047 MYH8P13535 1937 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 C19orf81C9J6K1 198 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 USP17L10C9JJH3 530 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 GH2P01242 217 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 GRK4P32298 578 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 SHMT1P34896 483 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 GCLCP48506 637 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-208ENST00000452047 EVX2Q03828 476 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 GABPAQ06546 454 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 RAET1EQ8TD07 263 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 SDR42E1Q8WUS8 393 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 TMEM106CQ9BVX2 250 aa15.1■□□□□ 0.01
CPSF4-208ENST00000452047 DCP1AQ9NPI6 582 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-208ENST00000452047 PLXNB2O15031 1838 aa15.09■□□□□ 0.01
CPSF4-208ENST00000452047 MYCP01106 439 aaPredicted RBP15.09■□□□□ 0.01
CPSF4-208ENST00000452047 CHGBP05060 677 aa15.09■□□□□ 0.01
CPSF4-208ENST00000452047 HOXA7P31268 230 aaPredicted RBP15.09■□□□□ 0.01
CPSF4-208ENST00000452047 RRP1P56182 461 aaKnown RBP15.09■□□□□ 0.01
CPSF4-208ENST00000452047 TMOD4Q9NZQ9 345 aa15.09■□□□□ 0.01
CPSF4-208ENST00000452047 PCDHB15Q9Y5E8 787 aa15.09■□□□□ 0.01
CPSF4-208ENST00000452047 TNPO2O14787 897 aaKnown RBP15.08■□□□□ 0
CPSF4-208ENST00000452047 MBD4O95243 580 aa15.08■□□□□ 0
CPSF4-208ENST00000452047 POLR3DP05423 398 aaPredicted RBP15.08■□□□□ 0
CPSF4-208ENST00000452047 FLT3LGP49771 235 aa15.08■□□□□ 0
CPSF4-208ENST00000452047 MTFR1Q15390 333 aa15.08■□□□□ 0
CPSF4-208ENST00000452047 CERKLQ49MI3 558 aaPredicted RBP15.08■□□□□ 0
CPSF4-208ENST00000452047 PRPF38BQ5VTL8 546 aaKnown RBP15.08■□□□□ 0
CPSF4-208ENST00000452047 SLAIN1Q8ND83 568 aa15.08■□□□□ 0
CPSF4-208ENST00000452047 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.08■□□□□ 0
CPSF4-208ENST00000452047 ARMT1Q9H993 441 aa15.08■□□□□ 0
CPSF4-208ENST00000452047 EMILIN3Q9NT22 766 aa15.08■□□□□ 0
CPSF4-208ENST00000452047 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
CPSF4-208ENST00000452047 MCM9Q9NXL9 1143 aa15.08■□□□□ 0
CPSF4-208ENST00000452047 MORF4L1Q9UBU8 362 aa15.08■□□□□ 0
CPSF4-208ENST00000452047 GUCY1A2P33402 732 aa15.07■□□□□ 0
CPSF4-208ENST00000452047 IRX3P78415 501 aaPredicted RBP15.07■□□□□ 0
CPSF4-208ENST00000452047 IRF5Q13568 498 aa15.07■□□□□ 0
CPSF4-208ENST00000452047 UBE3CQ15386 1083 aa15.07■□□□□ 0
CPSF4-208ENST00000452047 ABCB5Q2M3G0 1257 aa15.07■□□□□ 0
CPSF4-208ENST00000452047 C12orf42Q96LP6 360 aa15.07■□□□□ 0
CPSF4-208ENST00000452047 PRKAB2O43741 272 aa15.06■□□□□ 0
CPSF4-208ENST00000452047 CYP2D6P10635 497 aa15.06■□□□□ 0
CPSF4-208ENST00000452047 HERVK_113P62684 666 aa15.06■□□□□ 0
CPSF4-208ENST00000452047 RAB3GAP1Q15042 981 aa15.06■□□□□ 0
CPSF4-208ENST00000452047 USP17L2Q6R6M4 530 aa15.06■□□□□ 0
CPSF4-208ENST00000452047 SHISA4Q96DD7 197 aa15.06■□□□□ 0
CPSF4-208ENST00000452047 P2RX7Q99572 595 aaKnown RBP15.06■□□□□ 0
CPSF4-208ENST00000452047 KIAA1683Q9H0B3 1180 aa15.06■□□□□ 0
CPSF4-208ENST00000452047 ATP8A2Q9NTI2 1148 aa15.06■□□□□ 0
CPSF4-208ENST00000452047 ADCY3O60266 1144 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 ELNP15502 786 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 TSHZ3Q63HK5 1081 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 POTEEQ6S8J3 1075 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 SLC44A5Q8NCS7 719 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 ACER1Q8TDN7 264 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 PXYLP1Q8TE99 480 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 COA7Q96BR5 231 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 FEZ1Q99689 392 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 PUS7LQ9H0K6 701 aaKnown RBP15.05■□□□□ -0
CPSF4-208ENST00000452047 TXNRD2Q9NNW7 524 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 TAOK2Q9UL54 1235 aa15.05■□□□□ -0
CPSF4-208ENST00000452047 SMIM22K7EJ46 135 aa15.04■□□□□ -0
CPSF4-208ENST00000452047 PEX10O60683 326 aa15.04■□□□□ -0
CPSF4-208ENST00000452047 CCL5P13501 91 aa15.04■□□□□ -0
CPSF4-208ENST00000452047 SEPT2Q15019 361 aa15.04■□□□□ -0
CPSF4-208ENST00000452047 ZYXQ15942 572 aaKnown RBP15.04■□□□□ -0
CPSF4-208ENST00000452047 ZSCAN25Q6NSZ9 544 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms