RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.48□□□□□ -0.89
CNOT4-207ENST00000451834 IGKV6D-41A0A0C4DH26 115 aa9.48□□□□□ -0.89
CNOT4-207ENST00000451834 TTF1Q15361 905 aaPredicted RBP9.48□□□□□ -0.89
CNOT4-207ENST00000451834 FAM110CQ1W6H9 321 aa9.48□□□□□ -0.89
CNOT4-207ENST00000451834 UTP14CQ5TAP6 766 aaKnown RBP9.48□□□□□ -0.89
CNOT4-207ENST00000451834 ABRAQ8N0Z2 381 aa9.48□□□□□ -0.89
CNOT4-207ENST00000451834 DDX49Q9Y6V7 483 aaKnown RBP9.48□□□□□ -0.89
CNOT4-207ENST00000451834 UBE2Q2LH0YL09 131 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 ATP2A1O14983 1001 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 ATP5JP18859 108 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 CAP1Q01518 475 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 MECOMQ03112 1051 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 CRHR2Q13324 411 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 RNF214Q8ND24 703 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 SLAIN1Q8ND83 568 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 RBSNQ9H1K0 784 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 PCDHAC2Q9Y5I4 1007 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 PNMA6EA0A0J9YXQ4 647 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 CAVIN1Q6NZI2 390 aaKnown RBP9.47□□□□□ -0.89
CNOT4-207ENST00000451834 FTSJ3Q8IY81 847 aaKnown RBP9.47□□□□□ -0.89
CNOT4-207ENST00000451834 PARK7Q99497 189 aaKnown RBP9.47□□□□□ -0.89
CNOT4-207ENST00000451834 PCDHB15Q9Y5E8 787 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 DYNC1I1O14576 645 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 TEX2Q8IWB9 1127 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 HSCBQ8IWL3 235 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 TMEM57Q8N5G2 664 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 SHISA4Q96DD7 197 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 TRERF1Q96PN7 1200 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 RBM27Q9P2N5 1060 aaKnown RBP9.47□□□□□ -0.89
CNOT4-207ENST00000451834 DDX19BQ9UMR2 479 aa9.47□□□□□ -0.89
CNOT4-207ENST00000451834 BTBD19C9JJ37 291 aa9.46□□□□□ -0.89
CNOT4-207ENST00000451834 CD2BP2O95400 341 aaKnown RBP9.46□□□□□ -0.89
CNOT4-207ENST00000451834 MORN1Q5T089 497 aa9.46□□□□□ -0.89
CNOT4-207ENST00000451834 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.46□□□□□ -0.89
CNOT4-207ENST00000451834 TDRD3Q9H7E2 651 aaKnown RBP9.46□□□□□ -0.89
CNOT4-207ENST00000451834 DDX4Q9NQI0 724 aaKnown RBP9.46□□□□□ -0.89
CNOT4-207ENST00000451834 ANGEL1Q9UNK9 670 aaKnown RBP9.46□□□□□ -0.89
CNOT4-207ENST00000451834 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.46□□□□□ -0.9
CNOT4-207ENST00000451834 CAP2P40123 477 aa9.46□□□□□ -0.9
CNOT4-207ENST00000451834 TFCP2Q12800 502 aa9.46□□□□□ -0.9
CNOT4-207ENST00000451834 MSL3Q8N5Y2 521 aaKnown RBP9.46□□□□□ -0.9
CNOT4-207ENST00000451834 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
CNOT4-207ENST00000451834 DNAJC18Q9H819 358 aa9.46□□□□□ -0.9
CNOT4-207ENST00000451834 SWAP70Q9UH65 585 aa9.46□□□□□ -0.9
CNOT4-207ENST00000451834 FLT1P17948 1338 aa9.46□□□□□ -0.9
CNOT4-207ENST00000451834 G3V3G9 751 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 CDK11BP21127 795 aaKnown RBP9.45□□□□□ -0.9
CNOT4-207ENST00000451834 SP3Q02447 781 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 DGKZQ13574 1117 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 UBE3CQ15386 1083 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 DCAF8Q5TAQ9 597 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 SIRT2Q8IXJ6 389 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 CHMP4CQ96CF2 233 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 KIAA1683Q9H0B3 1180 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 TMOD2Q9NZR1 351 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 PTPRSQ13332 1948 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 TTC41PQ6P2S7 1318 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 CYP2E1P05181 493 aaPredicted RBP9.45□□□□□ -0.9
CNOT4-207ENST00000451834 MLLT1Q03111 559 aaPredicted RBP9.45□□□□□ -0.9
CNOT4-207ENST00000451834 SNX17Q15036 470 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 FAM43BQ6ZT52 329 aaPredicted RBP9.45□□□□□ -0.9
CNOT4-207ENST00000451834 CLMNQ96JQ2 1002 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 HAUS7Q99871 368 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 STAP2Q9UGK3 403 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 GJD2Q9UKL4 321 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 COL6A1P12109 1028 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 CTGFP29279 349 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 OLFML2BQ68BL8 750 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 TMEM39BQ9GZU3 492 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 R3HDMLQ9H3Y0 253 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 SRRDQ9UH36 339 aa9.45□□□□□ -0.9
CNOT4-207ENST00000451834 NOL7Q9UMY1 257 aaKnown RBP9.45□□□□□ -0.9
CNOT4-207ENST00000451834 U2AF2P26368 475 aaKnown RBP eCLIP9.44□□□□□ -0.95e-7■■■■■ 54.6
CNOT4-207ENST00000451834 ADORA1P30542 326 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 COPB2P35606 906 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 GHRHRQ02643 423 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 CNKSR2Q8WXI2 1034 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 SEZ6LQ9BYH1 1024 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 DBNLQ9UJU6 430 aaKnown RBP9.44□□□□□ -0.9
CNOT4-207ENST00000451834 CNMDO75829 334 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 PRDX5P30044 214 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 PI4KBQ9UBF8 816 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 KCNG1Q9UIX4 513 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 PNMA3Q9UL41 463 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 DIS3Q9Y2L1 958 aaKnown RBP9.44□□□□□ -0.9
CNOT4-207ENST00000451834 CSADQ9Y600 493 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 GJA8P48165 433 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 MNX1P50219 401 aaPredicted RBP9.44□□□□□ -0.9
CNOT4-207ENST00000451834 SASS6Q6UVJ0 657 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 ZNF771Q7L3S4 317 aaPredicted RBP9.44□□□□□ -0.9
CNOT4-207ENST00000451834 AS3MTQ9HBK9 375 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 ANAPC4Q9UJX5 808 aa9.44□□□□□ -0.9
CNOT4-207ENST00000451834 RLBP1P12271 317 aa9.43□□□□□ -0.9
CNOT4-207ENST00000451834 PABPC4Q13310 644 aaKnown RBP eCLIP9.43□□□□□ -0.9
CNOT4-207ENST00000451834 HDAC1Q13547 482 aaPredicted RBP9.43□□□□□ -0.9
CNOT4-207ENST00000451834 RCSD1Q6JBY9 416 aa9.43□□□□□ -0.9
CNOT4-207ENST00000451834 OSBPL3Q9H4L5 887 aa9.43□□□□□ -0.9
CNOT4-207ENST00000451834 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms