RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 PTPDC1A2A3K4 754 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 GOLGA8AA7E2F4 631 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 STX6O43752 255 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 DTNBO60941 627 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 HLA-DOAP06340 250 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 PDCP20941 246 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 CACNB3P54284 484 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 ARHGAP27Q6ZUM4 889 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 MICU3Q86XE3 530 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 RAB11FIP4Q86YS3 637 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 ZNF654Q8IZM8 581 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 DPF2Q92785 391 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 FAM217BQ9NTX9 383 aaPredicted RBP13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 SERPINB13Q9UIV8 391 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 ATRNL1Q5VV63 1379 aa13.15□□□□□ -0.3
NDUFA3-209ENST00000451517 TSPY3P0CV98 308 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 TSPY8P0CW00 308 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 ZSCAN22P10073 491 aaPredicted RBP13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 LMNB1P20700 586 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 CDC27P30260 824 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 FKBP1CQ5VVH2 108 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 LARP1BQ659C4 914 aaKnown RBP13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 SH3BP5LQ7L8J4 393 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 NEDD1Q8NHV4 660 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 MYL10Q9BUA6 226 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 TMOD2Q9NZR1 351 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 ZNF70Q9UC06 446 aaPredicted RBP13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 MTMR6Q9Y217 621 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 PLIN4Q96Q06 1357 aa13.14□□□□□ -0.31
NDUFA3-209ENST00000451517 DDTLA6NHG4 134 aaPredicted RBP13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 CPLX1O14810 134 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 NMT2O60551 498 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 CDKL5O76039 1030 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 DDAH1O94760 285 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 FDPSP14324 419 aaKnown RBP13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 RXRAP19793 462 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 SHMT1P34896 483 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 ADD1P35611 737 aaKnown RBP13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 NOVP48745 357 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 GMPSP49915 693 aaPredicted RBP13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 TCP10Q12799 353 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 PPP2R5BQ15173 497 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 NTRK3Q16288 839 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 RTN1Q16799 776 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 CATIPQ7Z7H3 387 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 METTL16Q86W50 562 aaKnown RBP13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 MYOZ2Q9NPC6 264 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 PI4KBQ9UBF8 816 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 KIF3AQ9Y496 699 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 ZNF541Q9H0D2 1346 aa13.13□□□□□ -0.31
NDUFA3-209ENST00000451517 SIPA1L1O43166 1804 aa13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 BAG4O95429 457 aaKnown RBP13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 CALM1P0DP23 149 aa13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 CALM2P0DP24 149 aa13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 CALM3P0DP25 149 aa13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 MCM4P33991 863 aa13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 TROAPQ12815 778 aa13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 FOXP4Q8IVH2 680 aaPredicted RBP13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 FAM184AQ8NB25 1140 aa13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 STK36Q9NRP7 1315 aa13.12□□□□□ -0.31
NDUFA3-209ENST00000451517 CNTNAP1P78357 1384 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 IGKV6D-41A0A0C4DH26 115 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 WNT10BO00744 389 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 F13A1P00488 732 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 YBX3P16989 372 aaKnown RBP eCLIP13.11□□□□□ -0.311e-10■■■■□ 22.9
NDUFA3-209ENST00000451517 IFNAR1P17181 557 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 FOXD4L5Q5VV16 416 aaPredicted RBP13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 CCDC144CPQ8IYA2 1237 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 RGS22Q8NE09 1264 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 FOXD4L4Q8WXT5 416 aaPredicted RBP13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 MAP3K14Q99558 947 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 DNAJC18Q9H819 358 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 ORC3Q9UBD5 711 aaPredicted RBP13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
NDUFA3-209ENST00000451517 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 TCP10L2B9ZVM9 353 aa13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 MYO1BO43795 1136 aa13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 AKR1B1P15121 316 aa13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 FAM83AQ86UY5 434 aa13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 NUP133Q8WUM0 1156 aa13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 CCDC17Q96LX7 622 aa13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 KAT14Q9H8E8 782 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms