RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 MAP3K12Q12852 859 aa33.05■■■□□ 2.88
USP42-204ENST00000451154 HSP90AB4PQ58FF6 505 aa33.05■■■□□ 2.88
USP42-204ENST00000451154 NKX2-3Q8TAU0 364 aa33.05■■■□□ 2.88
USP42-204ENST00000451154 COA7Q96BR5 231 aa33.05■■■□□ 2.88
USP42-204ENST00000451154 UNC93B1Q9H1C4 597 aa33.05■■■□□ 2.88
USP42-204ENST00000451154 TAOK2Q9UL54 1235 aa33.05■■■□□ 2.88
USP42-204ENST00000451154 USP5P45974 858 aa33.04■■■□□ 2.88
USP42-204ENST00000451154 COG6Q9Y2V7 657 aa33.04■■■□□ 2.88
USP42-204ENST00000451154 MYH1P12882 1939 aa33.03■■■□□ 2.88
USP42-204ENST00000451154 IRF5Q13568 498 aa33.03■■■□□ 2.88
USP42-204ENST00000451154 PXYLP1Q8TE99 480 aa33.03■■■□□ 2.88
USP42-204ENST00000451154 BCL11AQ9H165 835 aa33.03■■■□□ 2.88
USP42-204ENST00000451154 TMOD4Q9NZQ9 345 aa33.03■■■□□ 2.88
USP42-204ENST00000451154 HABP4Q5JVS0 413 aaKnown RBP33.02■■■□□ 2.88
USP42-204ENST00000451154 ZBTB21Q9ULJ3 1066 aa33.02■■■□□ 2.88
USP42-204ENST00000451154 INHAP05111 366 aa33.01■■■□□ 2.87
USP42-204ENST00000451154 SIRT2Q8IXJ6 389 aa33.01■■■□□ 2.87
USP42-204ENST00000451154 RPAP2Q8IXW5 612 aaPredicted RBP33.01■■■□□ 2.87
USP42-204ENST00000451154 GINM1Q9NU53 330 aa33.01■■■□□ 2.87
USP42-204ENST00000451154 C19orf81C9J6K1 198 aa33■■■□□ 2.87
USP42-204ENST00000451154 USP17L10C9JJH3 530 aa33■■■□□ 2.87
USP42-204ENST00000451154 CERS3Q8IU89 383 aa33■■■□□ 2.87
USP42-204ENST00000451154 P2RX7Q99572 595 aaKnown RBP33■■■□□ 2.87
USP42-204ENST00000451154 ZBTB40Q9NUA8 1239 aa33■■■□□ 2.87
USP42-204ENST00000451154 IRX3P78415 501 aaPredicted RBP32.99■■■□□ 2.87
USP42-204ENST00000451154 CLASRPQ8N2M8 674 aaKnown RBP32.99■■■□□ 2.87
USP42-204ENST00000451154 U2AF1L4Q8WU68 220 aaKnown RBP32.99■■■□□ 2.87
USP42-204ENST00000451154 DDX19BQ9UMR2 479 aa32.99■■■□□ 2.87
USP42-204ENST00000451154 PEX10O60683 326 aa32.98■■■□□ 2.87
USP42-204ENST00000451154 GH2P01242 217 aa32.98■■■□□ 2.87
USP42-204ENST00000451154 HOXA7P31268 230 aaPredicted RBP32.98■■■□□ 2.87
USP42-204ENST00000451154 DPF3Q92784 378 aa32.98■■■□□ 2.87
USP42-204ENST00000451154 KIF1BPQ96EK5 621 aa32.98■■■□□ 2.87
USP42-204ENST00000451154 H0YGN5 161 aa32.97■■■□□ 2.87
USP42-204ENST00000451154 SGPL1O95470 568 aa32.97■■■□□ 2.87
USP42-204ENST00000451154 HMMRO75330 724 aa32.96■■■□□ 2.87
USP42-204ENST00000451154 TTF1Q15361 905 aaPredicted RBP32.96■■■□□ 2.87
USP42-204ENST00000451154 TATDN1Q6P1N9 297 aa32.96■■■□□ 2.87
USP42-204ENST00000451154 TMED8Q6PL24 325 aaPredicted RBP32.96■■■□□ 2.87
USP42-204ENST00000451154 UBE2Q1Q7Z7E8 422 aa32.96■■■□□ 2.87
USP42-204ENST00000451154 RIOK1Q9BRS2 568 aaKnown RBP32.96■■■□□ 2.87
USP42-204ENST00000451154 EMILIN3Q9NT22 766 aa32.96■■■□□ 2.87
USP42-204ENST00000451154 SERPINB13Q9UIV8 391 aa32.96■■■□□ 2.87
USP42-204ENST00000451154 GJD2Q9UKL4 321 aa32.96■■■□□ 2.87
USP42-204ENST00000451154 IFIT2P09913 472 aaKnown RBP32.95■■■□□ 2.87
USP42-204ENST00000451154 SLC9C2Q5TAH2 1124 aa32.95■■■□□ 2.87
USP42-204ENST00000451154 TTC6Q86TZ1 520 aa32.95■■■□□ 2.87
USP42-204ENST00000451154 MORF4L1Q9UBU8 362 aa32.95■■■□□ 2.87
USP42-204ENST00000451154 MAGEB6P1A0A0J9YX57 407 aa32.94■■■□□ 2.86
USP42-204ENST00000451154 HERVK_113P62684 666 aa32.94■■■□□ 2.86
USP42-204ENST00000451154 DEFB118Q96PH6 123 aa32.94■■■□□ 2.86
USP42-204ENST00000451154 DNAJC2Q99543 621 aaKnown RBP32.94■■■□□ 2.86
USP42-204ENST00000451154 TXNRD2Q9NNW7 524 aa32.94■■■□□ 2.86
USP42-204ENST00000451154 RCAN3Q9UKA8 241 aa32.94■■■□□ 2.86
USP42-204ENST00000451154 GOLIM4O00461 696 aa32.93■■■□□ 2.86
USP42-204ENST00000451154 TFRCP02786 760 aaKnown RBP32.93■■■□□ 2.86
USP42-204ENST00000451154 PDE6AP16499 860 aa32.93■■■□□ 2.86
USP42-204ENST00000451154 PLCD1P51178 756 aa32.93■■■□□ 2.86
USP42-204ENST00000451154 USP17L2Q6R6M4 530 aa32.93■■■□□ 2.86
USP42-204ENST00000451154 EHD4Q9H223 541 aa32.93■■■□□ 2.86
USP42-204ENST00000451154 COLQQ9Y215 455 aaPredicted RBP32.93■■■□□ 2.86
USP42-204ENST00000451154 CERKLQ49MI3 558 aaPredicted RBP32.92■■■□□ 2.86
USP42-204ENST00000451154 GPRC5AQ8NFJ5 357 aa32.92■■■□□ 2.86
USP42-204ENST00000451154 FARP2O94887 1054 aaPredicted RBP32.91■■■□□ 2.86
USP42-204ENST00000451154 ZYXQ15942 572 aaKnown RBP32.91■■■□□ 2.86
USP42-204ENST00000451154 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.91■■■□□ 2.86
USP42-204ENST00000451154 EDC3Q96F86 508 aaKnown RBP32.91■■■□□ 2.86
USP42-204ENST00000451154 RBPJLQ9UBG7 517 aa32.91■■■□□ 2.86
USP42-204ENST00000451154 RAB11FIP3O75154 756 aa32.9■■■□□ 2.86
USP42-204ENST00000451154 POLR3DP05423 398 aaPredicted RBP32.9■■■□□ 2.86
USP42-204ENST00000451154 RAB3GAP1Q15042 981 aa32.9■■■□□ 2.86
USP42-204ENST00000451154 Q3C1V9 767 aa32.9■■■□□ 2.86
USP42-204ENST00000451154 PAK6Q9NQU5 681 aaPredicted RBP32.9■■■□□ 2.86
USP42-204ENST00000451154 PCDH10Q9P2E7 1040 aa32.9■■■□□ 2.86
USP42-204ENST00000451154 ZNF532Q9HCE3 1301 aa32.9■■■□□ 2.86
USP42-204ENST00000451154 ABCB5Q2M3G0 1257 aa32.89■■■□□ 2.86
USP42-204ENST00000451154 SHMT1P34896 483 aa32.88■■■□□ 2.85
USP42-204ENST00000451154 POTEEQ6S8J3 1075 aa32.88■■■□□ 2.85
USP42-204ENST00000451154 FEZ1Q99689 392 aa32.88■■■□□ 2.85
USP42-204ENST00000451154 HTATIP2Q9BUP3 242 aa32.88■■■□□ 2.85
USP42-204ENST00000451154 CRNKL1Q9BZJ0 848 aaKnown RBP32.88■■■□□ 2.85
USP42-204ENST00000451154 TCRBV5S4A2TA0A5A2 114 aa32.87■■■□□ 2.85
USP42-204ENST00000451154 CYP2B6P20813 491 aa32.87■■■□□ 2.85
USP42-204ENST00000451154 EVX2Q03828 476 aa32.87■■■□□ 2.85
USP42-204ENST00000451154 TRIM32Q13049 653 aa32.87■■■□□ 2.85
USP42-204ENST00000451154 ACER1Q8TDN7 264 aa32.87■■■□□ 2.85
USP42-204ENST00000451154 BOLA2Q9H3K6 86 aa32.87■■■□□ 2.85
USP42-204ENST00000451154 CHMP4BQ9H444 224 aaKnown RBP32.87■■■□□ 2.85
USP42-204ENST00000451154 PLXNB2O15031 1838 aa32.86■■■□□ 2.85
USP42-204ENST00000451154 TRIOBPQ9H2D6 2365 aa32.86■■■□□ 2.85
USP42-204ENST00000451154 HMGCRP04035 888 aa32.86■■■□□ 2.85
USP42-204ENST00000451154 C20orf194Q5TEA3 1177 aa32.86■■■□□ 2.85
USP42-204ENST00000451154 PAGR1Q9BTK6 254 aa32.86■■■□□ 2.85
USP42-204ENST00000451154 XRN2Q9H0D6 950 aaKnown RBP eCLIP32.86■■■□□ 2.852e-7■■■■□ 23.4
USP42-204ENST00000451154 CABP5Q9NP86 173 aa32.86■■■□□ 2.85
USP42-204ENST00000451154 MCM9Q9NXL9 1143 aa32.86■■■□□ 2.85
USP42-204ENST00000451154 ERVK-9P63128 1117 aa32.85■■■□□ 2.85
USP42-204ENST00000451154 ERVK-24P63145 666 aa32.85■■■□□ 2.85
USP42-204ENST00000451154 SLFNL1Q499Z3 407 aa32.85■■■□□ 2.85
USP42-204ENST00000451154 CRISPLD2Q9H0B8 497 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms