RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 ZMYM6O95789 1325 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 NWD2Q9ULI1 1742 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 PLCD1P51178 756 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 FKBP4Q02790 459 aaKnown RBP eCLIP19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 GRIN1Q05586 938 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 NCAPH2Q6IBW4 605 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 CASP14P31944 242 aa19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 METAP2P50579 478 aaKnown RBP eCLIP19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 WASHC4Q2M389 1173 aa19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 TEX2Q8IWB9 1127 aa19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 STK11IPQ8N1F8 1099 aa19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 CTCFLQ8NI51 663 aaPredicted RBP19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 PUS3Q9BZE2 481 aaKnown RBP19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 C4AP0C0L4 1744 aa19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 C4BP0C0L5 1744 aa19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 PKD1L3Q7Z443 1732 aa19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 COL18A1P39060 1754 aa19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 MYO6Q9UM54 1294 aa19.47■□□□□ 0.71
SCUBE2-202ENST00000450649 TJP1Q07157 1748 aa19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 PBX1P40424 430 aa19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 EIF5P55010 431 aaKnown RBP19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 AKAP17AQ02040 695 aaKnown RBP19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 TRDNQ13061 729 aa19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 TRIML1Q8N9V2 468 aa19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 WDR19Q8NEZ3 1342 aa19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 CDKL5O76039 1030 aa19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 ERCC5P28715 1186 aaPredicted RBP19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 CCDC148Q8NFR7 591 aa19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 SEC31BQ9NQW1 1179 aa19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 CPDO75976 1380 aa19.46■□□□□ 0.71
SCUBE2-202ENST00000450649 AMPD2Q01433 879 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 GPATCH11Q8N954 259 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 ADD3Q9UEY8 706 aaKnown RBP19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 FBXO3Q9UK99 471 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 FXR1P51114 621 aaKnown RBP eCLIP19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 TRIM29Q14134 588 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 MCTP2Q6DN12 878 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 RIN2Q8WYP3 895 aaPredicted RBP19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 APPBP2Q92624 585 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 HPCAL4Q9UM19 191 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 NUP188Q5SRE5 1749 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 MAP3K15Q6ZN16 1313 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 ZNF213O14771 459 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 ARHGAP25P42331 645 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 HSP90AB3PQ58FF7 597 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 PROSER2Q86WR7 435 aaPredicted RBP19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 CNGA4Q8IV77 575 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 DENND2AQ9ULE3 1009 aa19.45■□□□□ 0.7
SCUBE2-202ENST00000450649 GYPCP04921 128 aa19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 STX17P56962 302 aa19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 SMARCC1Q92922 1105 aaPredicted RBP19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 WWC3Q9ULE0 1092 aa19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 ANGEL1Q9UNK9 670 aaKnown RBP19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 CDHR2Q9BYE9 1310 aa19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 SWT1Q5T5J6 900 aaKnown RBP19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 KLHL10Q6JEL2 608 aa19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 CPLX2Q6PUV4 134 aaKnown RBP19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 XAGE2Q96GT9 111 aa19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 MYO1AQ9UBC5 1043 aa19.44■□□□□ 0.7
SCUBE2-202ENST00000450649 ERVK-24P63145 666 aa19.43■□□□□ 0.7
SCUBE2-202ENST00000450649 SPATA1Q5VX52 437 aa19.43■□□□□ 0.7
SCUBE2-202ENST00000450649 FAM107BQ9H098 131 aa19.43■□□□□ 0.7
SCUBE2-202ENST00000450649 ZBTB3Q9H5J0 574 aa19.43■□□□□ 0.7
SCUBE2-202ENST00000450649 FBXO2Q9UK22 296 aaPredicted RBP19.43■□□□□ 0.7
SCUBE2-202ENST00000450649 ABCC12Q96J65 1359 aa19.43■□□□□ 0.7
SCUBE2-202ENST00000450649 UBE2Q2LH0YL09 131 aa19.43■□□□□ 0.7
SCUBE2-202ENST00000450649 EXOC5O00471 708 aa19.43■□□□□ 0.7
SCUBE2-202ENST00000450649 FECHP22830 423 aa19.43■□□□□ 0.7
SCUBE2-202ENST00000450649 USP14P54578 494 aa19.43■□□□□ 0.7
SCUBE2-202ENST00000450649 ZC3H4Q9UPT8 1303 aaKnown RBP19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 PARP4Q9UKK3 1724 aaKnown RBP19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 A1BGP04217 495 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 CHRM1P11229 460 aaPredicted RBP19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 PTPREP23469 700 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 ADORA1P30542 326 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 IARSP41252 1262 aaKnown RBP19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 CCDC57Q2TAC2 916 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 MICU3Q86XE3 530 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 TMTC1Q8IUR5 882 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 NKX2-3Q8TAU0 364 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 CCDC51Q96ER9 411 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 ERLIN2O94905 339 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 STIM1Q13586 685 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 MAP9Q49MG5 647 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 APOA5Q6Q788 366 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 KAT2BQ92831 832 aa19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 PUS7LQ9H0K6 701 aaKnown RBP19.42■□□□□ 0.7
SCUBE2-202ENST00000450649 ACTN4O43707 911 aaKnown RBP19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 LIG3P49916 1009 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 TOB1P50616 345 aaPredicted RBP19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 FILIP1LQ4L180 1135 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 NOSTRINQ8IVI9 506 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 DDX60Q8IY21 1712 aaKnown RBP19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 SPATA20Q8TB22 786 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 GDAP1L1Q96MZ0 367 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 SENP2Q9HC62 589 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 RANBP6O60518 1105 aaKnown RBP19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 CHRNA2Q15822 529 aa19.41■□□□□ 0.7
SCUBE2-202ENST00000450649 CYB5R4Q7L1T6 521 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms