RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 NMT2O60551 498 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 CALM1P0DP23 149 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 CALM2P0DP24 149 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 CALM3P0DP25 149 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 IFNAR1P17181 557 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 RASA1P20936 1047 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 CDK8P49336 464 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 RBM5P52756 815 aaKnown RBP eCLIP16.63■□□□□ 0.25
USP39-207ENST00000450066 FERMT3Q86UX7 667 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 DGKHQ86XP1 1220 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 NIM1KQ8IY84 436 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 TAOK3Q9H2K8 898 aa16.63■□□□□ 0.25
USP39-207ENST00000450066 DDAH1O94760 285 aa16.62■□□□□ 0.25
USP39-207ENST00000450066 TSPY3P0CV98 308 aa16.62■□□□□ 0.25
USP39-207ENST00000450066 TSPY8P0CW00 308 aa16.62■□□□□ 0.25
USP39-207ENST00000450066 SLC44A5Q8NCS7 719 aa16.62■□□□□ 0.25
USP39-207ENST00000450066 ANKS1AQ92625 1134 aa16.62■□□□□ 0.25
USP39-207ENST00000450066 OSBPL5Q9H0X9 879 aaPredicted RBP16.62■□□□□ 0.25
USP39-207ENST00000450066 PSMD14O00487 310 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 NPM3O75607 178 aaKnown RBP16.61■□□□□ 0.25
USP39-207ENST00000450066 RAD17O75943 681 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 TROAPQ12815 778 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 KLHL40Q2TBA0 621 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 RCSD1Q6JBY9 416 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 NUP133Q8WUM0 1156 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 IDI2Q9BXS1 227 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 IL17RBQ9NRM6 502 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 STK36Q9NRP7 1315 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 ECM29Q5VYK3 1845 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 DNM1Q05193 864 aaKnown RBP16.61■□□□□ 0.25
USP39-207ENST00000450066 RESTQ13127 1097 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 PHKBQ93100 1093 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 GMLQ99445 158 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 PCDHAC2Q9Y5I4 1007 aa16.61■□□□□ 0.25
USP39-207ENST00000450066 DDX49Q9Y6V7 483 aaKnown RBP16.61■□□□□ 0.25
USP39-207ENST00000450066 FMNL1O95466 1100 aaPredicted RBP16.6■□□□□ 0.25
USP39-207ENST00000450066 GABPAQ06546 454 aa16.6■□□□□ 0.25
USP39-207ENST00000450066 SSRP1Q08945 709 aaKnown RBP16.6■□□□□ 0.25
USP39-207ENST00000450066 NFIAQ12857 509 aa16.6■□□□□ 0.25
USP39-207ENST00000450066 FBXO18Q8NFZ0 1043 aa16.6■□□□□ 0.25
USP39-207ENST00000450066 CFAP100Q494V2 611 aa16.6■□□□□ 0.25
USP39-207ENST00000450066 USP48Q86UV5 1035 aa16.6■□□□□ 0.25
USP39-207ENST00000450066 RBM28Q9NW13 759 aaKnown RBP16.6■□□□□ 0.25
USP39-207ENST00000450066 SERPINB13Q9UIV8 391 aa16.6■□□□□ 0.25
USP39-207ENST00000450066 BCS1LQ9Y276 419 aa16.6■□□□□ 0.25
USP39-207ENST00000450066 NFKBIEO00221 500 aa16.59■□□□□ 0.25
USP39-207ENST00000450066 CSPP1Q1MSJ5 1256 aa16.59■□□□□ 0.25
USP39-207ENST00000450066 TRIM22Q8IYM9 498 aa16.59■□□□□ 0.25
USP39-207ENST00000450066 CRACR2BQ8N4Y2 399 aaPredicted RBP16.59■□□□□ 0.25
USP39-207ENST00000450066 NEDD1Q8NHV4 660 aa16.59■□□□□ 0.25
USP39-207ENST00000450066 WASF1Q92558 559 aa16.59■□□□□ 0.25
USP39-207ENST00000450066 DHX36Q9H2U1 1008 aaKnown RBP16.59■□□□□ 0.25
USP39-207ENST00000450066 GDPD2Q9HCC8 539 aa16.59■□□□□ 0.25
USP39-207ENST00000450066 SWAP70Q9UH65 585 aa16.59■□□□□ 0.25
USP39-207ENST00000450066 LTBP3Q9NS15 1303 aa16.59■□□□□ 0.25
USP39-207ENST00000450066 HLA-DOAP06340 250 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 NCLP19338 710 aaKnown RBP16.58■□□□□ 0.25
USP39-207ENST00000450066 FOSBP53539 338 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 KRT85P78386 507 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 GSE1Q14687 1217 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 NBPF11Q86T75 865 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 OGFOD1Q8N543 542 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 AGBL3Q8NEM8 1001 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 JDP2Q8WYK2 163 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 ALG1Q9BT22 464 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 SLC26A6Q9BXS9 759 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 EHD4Q9H223 541 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 KAT14Q9H8E8 782 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 HDAC9Q9UKV0 1011 aa16.58■□□□□ 0.25
USP39-207ENST00000450066 TCHHQ07283 1943 aa16.58■□□□□ 0.24
USP39-207ENST00000450066 FAM198AQ9UFP1 575 aa16.58■□□□□ 0.24
USP39-207ENST00000450066 TAOK2Q9UL54 1235 aa16.58■□□□□ 0.24
USP39-207ENST00000450066 GUCY1B3Q02153 619 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 CXCL9Q07325 125 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 PRMT6Q96LA8 375 aaPredicted RBP16.57■□□□□ 0.24
USP39-207ENST00000450066 MAP3K14Q99558 947 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 PLIN4Q96Q06 1357 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 FIBPO43427 364 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 MBD3O95983 291 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 CACNB3P54284 484 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 ZFPM1Q8IX07 1006 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 PNMA1Q8ND90 353 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 CTCFLQ8NI51 663 aaPredicted RBP16.57■□□□□ 0.24
USP39-207ENST00000450066 GPT2Q8TD30 523 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 RNF26Q9BY78 433 aaPredicted RBP16.57■□□□□ 0.24
USP39-207ENST00000450066 SCAND2PQ9GZW5 306 aaPredicted RBP16.57■□□□□ 0.24
USP39-207ENST00000450066 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
USP39-207ENST00000450066 SPON1Q9HCB6 807 aa16.57■□□□□ 0.24
USP39-207ENST00000450066 SPDYE2BA6NHP3 402 aa16.56■□□□□ 0.24
USP39-207ENST00000450066 DEXIO95424 95 aa16.56■□□□□ 0.24
USP39-207ENST00000450066 SPDYE6P0CI01 402 aa16.56■□□□□ 0.24
USP39-207ENST00000450066 NOVP48745 357 aa16.56■□□□□ 0.24
USP39-207ENST00000450066 FUT2Q10981 343 aa16.56■□□□□ 0.24
USP39-207ENST00000450066 OTUD7BQ6GQQ9 843 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms