RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ANGEL2Q5VTE6 544 aaKnown RBP22.68■■□□□ 1.22
RPS28-202ENST00000449223 ZC3H15Q8WU90 426 aaKnown RBP22.68■■□□□ 1.22
RPS28-202ENST00000449223 BRF1Q92994 677 aa22.68■■□□□ 1.22
RPS28-202ENST00000449223 LRRC2Q9BYS8 371 aa22.68■■□□□ 1.22
RPS28-202ENST00000449223 SH2B1Q9NRF2 756 aaPredicted RBP22.68■■□□□ 1.22
RPS28-202ENST00000449223 GGA3Q9NZ52 723 aa22.68■■□□□ 1.22
RPS28-202ENST00000449223 POTECB2RU33 542 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 EPHX2P34913 555 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 SEC23AQ15436 765 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 ZNF444Q8N0Y2 327 aaPredicted RBP22.67■■□□□ 1.22
RPS28-202ENST00000449223 ZSCAN10Q96SZ4 725 aaPredicted RBP22.67■■□□□ 1.22
RPS28-202ENST00000449223 DEFB129Q9H1M3 183 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 LY9Q9HBG7 655 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 TPCN1Q9ULQ1 816 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 TSPY2A6NKD2 308 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 FGD1P98174 961 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 TFAP4Q01664 338 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 CUL4AQ13619 759 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 CCDC178Q5BJE1 867 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 TMTC2Q8N394 836 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 CRACR2BQ8N4Y2 399 aaPredicted RBP22.67■■□□□ 1.22
RPS28-202ENST00000449223 NEDD1Q8NHV4 660 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 CCDC17Q96LX7 622 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 UBAC1Q9BSL1 405 aa22.67■■□□□ 1.22
RPS28-202ENST00000449223 POLR2AP24928 1970 aaKnown RBP22.66■■□□□ 1.22
RPS28-202ENST00000449223 TNKSO95271 1327 aa22.66■■□□□ 1.22
RPS28-202ENST00000449223 NOVP48745 357 aa22.66■■□□□ 1.22
RPS28-202ENST00000449223 ZNF274Q96GC6 653 aaPredicted RBP22.66■■□□□ 1.22
RPS28-202ENST00000449223 TAF1DQ9H5J8 278 aaPredicted RBP22.66■■□□□ 1.22
RPS28-202ENST00000449223 IFIT3O14879 490 aaKnown RBP22.65■■□□□ 1.22
RPS28-202ENST00000449223 TSPY3P0CV98 308 aa22.65■■□□□ 1.22
RPS28-202ENST00000449223 TSPY8P0CW00 308 aa22.65■■□□□ 1.22
RPS28-202ENST00000449223 TMEM67Q5HYA8 995 aa22.65■■□□□ 1.22
RPS28-202ENST00000449223 FAM47AQ5JRC9 791 aa22.65■■□□□ 1.22
RPS28-202ENST00000449223 ENAHQ8N8S7 591 aaPredicted RBP22.65■■□□□ 1.22
RPS28-202ENST00000449223 ANKS1AQ92625 1134 aa22.65■■□□□ 1.22
RPS28-202ENST00000449223 GPHNQ9NQX3 736 aaPredicted RBP22.65■■□□□ 1.22
RPS28-202ENST00000449223 ERICH2A1L162 156 aa22.64■■□□□ 1.21
RPS28-202ENST00000449223 RCAN1P53805 252 aa22.64■■□□□ 1.21
RPS28-202ENST00000449223 ME3Q16798 604 aa22.64■■□□□ 1.21
RPS28-202ENST00000449223 PNMA8AQ86V59 439 aaPredicted RBP22.64■■□□□ 1.21
RPS28-202ENST00000449223 DGKHQ86XP1 1220 aa22.64■■□□□ 1.21
RPS28-202ENST00000449223 CDAN1Q8IWY9 1227 aa22.64■■□□□ 1.21
RPS28-202ENST00000449223 IL17RBQ9NRM6 502 aa22.64■■□□□ 1.21
RPS28-202ENST00000449223 IGKV6D-41A0A0C4DH26 115 aa22.63■■□□□ 1.21
RPS28-202ENST00000449223 WTAPQ15007 396 aa22.63■■□□□ 1.21
RPS28-202ENST00000449223 INTS4Q96HW7 963 aaKnown RBP22.63■■□□□ 1.21
RPS28-202ENST00000449223 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.63■■□□□ 1.21
RPS28-202ENST00000449223 TRIM34Q9BYJ4 488 aa22.63■■□□□ 1.21
RPS28-202ENST00000449223 NID2Q14112 1375 aa22.63■■□□□ 1.21
RPS28-202ENST00000449223 LARGE1O95461 756 aa22.62■■□□□ 1.21
RPS28-202ENST00000449223 APOBRQ0VD83 1088 aa22.62■■□□□ 1.21
RPS28-202ENST00000449223 RCSD1Q6JBY9 416 aa22.62■■□□□ 1.21
RPS28-202ENST00000449223 HOOK2Q96ED9 719 aa22.62■■□□□ 1.21
RPS28-202ENST00000449223 ZKSCAN3Q9BRR0 538 aa22.62■■□□□ 1.21
RPS28-202ENST00000449223 APOA5Q6Q788 366 aa22.62■■□□□ 1.21
RPS28-202ENST00000449223 NOL8Q76FK4 1167 aaKnown RBP22.62■■□□□ 1.21
RPS28-202ENST00000449223 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.62■■□□□ 1.21
RPS28-202ENST00000449223 DAXXQ9UER7 740 aaPredicted RBP22.62■■□□□ 1.21
RPS28-202ENST00000449223 BRPF3Q9ULD4 1205 aa22.62■■□□□ 1.21
RPS28-202ENST00000449223 PFKFB2O60825 505 aa22.61■■□□□ 1.21
RPS28-202ENST00000449223 SLURP2P0DP57 97 aa22.61■■□□□ 1.21
RPS28-202ENST00000449223 AKR1B1P15121 316 aa22.61■■□□□ 1.21
RPS28-202ENST00000449223 PDIA3P30101 505 aaKnown RBP22.61■■□□□ 1.21
RPS28-202ENST00000449223 CERKLQ49MI3 558 aaPredicted RBP22.61■■□□□ 1.21
RPS28-202ENST00000449223 DCPSQ96C86 337 aaKnown RBP22.61■■□□□ 1.21
RPS28-202ENST00000449223 LARP6Q9BRS8 491 aaKnown RBP22.61■■□□□ 1.21
RPS28-202ENST00000449223 SENP2Q9HC62 589 aa22.61■■□□□ 1.21
RPS28-202ENST00000449223 KLF18A0A0U1RQI7 1052 aa22.6■■□□□ 1.21
RPS28-202ENST00000449223 FAM196BA6NMK8 535 aa22.6■■□□□ 1.21
RPS28-202ENST00000449223 NMT2O60551 498 aa22.6■■□□□ 1.21
RPS28-202ENST00000449223 PPP4R3BQ5MIZ7 849 aa22.6■■□□□ 1.21
RPS28-202ENST00000449223 IFIT1BQ5T764 474 aaKnown RBP22.6■■□□□ 1.21
RPS28-202ENST00000449223 GTF3C6Q969F1 213 aa22.6■■□□□ 1.21
RPS28-202ENST00000449223 SLC4A3P48751 1232 aa22.59■■□□□ 1.21
RPS28-202ENST00000449223 ST3GAL1Q11201 340 aa22.59■■□□□ 1.21
RPS28-202ENST00000449223 MTMR4Q9NYA4 1195 aa22.59■■□□□ 1.21
RPS28-202ENST00000449223 SCAF8Q9UPN6 1271 aaKnown RBP22.59■■□□□ 1.21
RPS28-202ENST00000449223 HPS5Q9UPZ3 1129 aa22.59■■□□□ 1.21
RPS28-202ENST00000449223 SSC5DA1L4H1 1573 aa22.59■■□□□ 1.21
RPS28-202ENST00000449223 CCDC69A6NI79 296 aa22.58■■□□□ 1.21
RPS28-202ENST00000449223 PHF20L1A8MW92 1017 aa22.58■■□□□ 1.21
RPS28-202ENST00000449223 VEGFAP15692 232 aaPredicted RBP22.58■■□□□ 1.21
RPS28-202ENST00000449223 NBPF12Q5TAG4 269 aaPredicted RBP22.58■■□□□ 1.21
RPS28-202ENST00000449223 TMEM179Q6ZVK1 233 aa22.58■■□□□ 1.21
RPS28-202ENST00000449223 SULF1Q8IWU6 871 aa22.58■■□□□ 1.21
RPS28-202ENST00000449223 CHMP4CQ96CF2 233 aa22.58■■□□□ 1.21
RPS28-202ENST00000449223 CEP95Q96GE4 821 aa22.58■■□□□ 1.21
RPS28-202ENST00000449223 ATAD5Q96QE3 1844 aa22.58■■□□□ 1.21
RPS28-202ENST00000449223 DCAF15Q66K64 600 aa22.57■■□□□ 1.2
RPS28-202ENST00000449223 SLKQ9H2G2 1235 aaPredicted RBP22.57■■□□□ 1.2
RPS28-202ENST00000449223 GINM1Q9NU53 330 aa22.57■■□□□ 1.2
RPS28-202ENST00000449223 SLC12A7Q9Y666 1083 aa22.57■■□□□ 1.2
RPS28-202ENST00000449223 MYH4Q9Y623 1939 aa22.57■■□□□ 1.2
RPS28-202ENST00000449223 GOLGA8BA8MQT2 603 aa22.57■■□□□ 1.2
RPS28-202ENST00000449223 TROAPQ12815 778 aa22.57■■□□□ 1.2
RPS28-202ENST00000449223 RRP1BQ14684 758 aaKnown RBP22.57■■□□□ 1.2
RPS28-202ENST00000449223 PPP2R5BQ15173 497 aa22.57■■□□□ 1.2
RPS28-202ENST00000449223 ABCB5Q2M3G0 1257 aa22.57■■□□□ 1.2
RPS28-202ENST00000449223 SUPT20HL1Q3ZLR7 823 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms