RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MAGEB6P1A0A0J9YX57 407 aa17.59■□□□□ 0.41
USP39-206ENST00000448971 GJB1P08034 283 aa17.59■□□□□ 0.41
USP39-206ENST00000448971 GJA8P48165 433 aa17.59■□□□□ 0.41
USP39-206ENST00000448971 B4GALNT3Q6L9W6 998 aa17.59■□□□□ 0.41
USP39-206ENST00000448971 ZSCAN25Q6NSZ9 544 aa17.59■□□□□ 0.41
USP39-206ENST00000448971 RAET1EQ8TD07 263 aa17.59■□□□□ 0.41
USP39-206ENST00000448971 GLRX3O76003 335 aaKnown RBP17.58■□□□□ 0.4
USP39-206ENST00000448971 CYP2C8P10632 490 aa17.58■□□□□ 0.4
USP39-206ENST00000448971 CCL5P13501 91 aa17.58■□□□□ 0.4
USP39-206ENST00000448971 ADD2P35612 726 aa17.58■□□□□ 0.4
USP39-206ENST00000448971 MAP3K10Q02779 954 aa17.58■□□□□ 0.4
USP39-206ENST00000448971 SMC5Q8IY18 1101 aa17.58■□□□□ 0.4
USP39-206ENST00000448971 NKX2-3Q8TAU0 364 aa17.58■□□□□ 0.4
USP39-206ENST00000448971 TRIM34Q9BYJ4 488 aa17.58■□□□□ 0.4
USP39-206ENST00000448971 LNPKQ9C0E8 428 aa17.58■□□□□ 0.4
USP39-206ENST00000448971 CDK5RAP2Q96SN8 1893 aa17.58■□□□□ 0.4
USP39-206ENST00000448971 DOCK3Q8IZD9 2030 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 NAV1Q8NEY1 1877 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 MYPNQ86TC9 1320 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 FAM196BA6NMK8 535 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 IGHDP01880 384 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 HLA-DOAP06340 250 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 CHRDL2Q6WN34 429 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 PI4K2BQ8TCG2 481 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 DPF3Q92784 378 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 RIOK1Q9BRS2 568 aaKnown RBP17.57■□□□□ 0.4
USP39-206ENST00000448971 CRNKL1Q9BZJ0 848 aaKnown RBP17.57■□□□□ 0.4
USP39-206ENST00000448971 DHX36Q9H2U1 1008 aaKnown RBP17.57■□□□□ 0.4
USP39-206ENST00000448971 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.57■□□□□ 0.4
USP39-206ENST00000448971 SAP30BPQ9UHR5 308 aaKnown RBP17.57■□□□□ 0.4
USP39-206ENST00000448971 LAMA3Q16787 3333 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 MYH7P12883 1935 aa17.57■□□□□ 0.4
USP39-206ENST00000448971 MGAMO43451 1857 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 SALL3Q9BXA9 1300 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 PRKCZQ05513 592 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 LCORLQ8N3X6 602 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 KBTBD3Q8NAB2 608 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 PARK7Q99497 189 aaKnown RBP17.56■□□□□ 0.4
USP39-206ENST00000448971 RNF208Q9H0X6 261 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 PRO3102Q9H379 93 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 RBM27Q9P2N5 1060 aaKnown RBP17.56■□□□□ 0.4
USP39-206ENST00000448971 GABRQQ9UN88 632 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 AFG3L2Q9Y4W6 797 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 ZHX2Q9Y6X8 837 aa17.56■□□□□ 0.4
USP39-206ENST00000448971 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
USP39-206ENST00000448971 DOCK1Q14185 1865 aa17.55■□□□□ 0.4
USP39-206ENST00000448971 A0A0G2JLL6 359 aaPredicted RBP17.55■□□□□ 0.4
USP39-206ENST00000448971 MBD4O95243 580 aa17.55■□□□□ 0.4
USP39-206ENST00000448971 SLURP2P0DP57 97 aa17.55■□□□□ 0.4
USP39-206ENST00000448971 PTPRAP18433 802 aa17.55■□□□□ 0.4
USP39-206ENST00000448971 FCGRTP55899 365 aa17.55■□□□□ 0.4
USP39-206ENST00000448971 SLFNL1Q499Z3 407 aa17.55■□□□□ 0.4
USP39-206ENST00000448971 PRRT2Q7Z6L0 340 aaPredicted RBP17.55■□□□□ 0.4
USP39-206ENST00000448971 SCYL3Q8IZE3 742 aa17.55■□□□□ 0.4
USP39-206ENST00000448971 CRACR2BQ8N4Y2 399 aaPredicted RBP17.55■□□□□ 0.4
USP39-206ENST00000448971 FSD1Q9BTV5 496 aa17.55■□□□□ 0.4
USP39-206ENST00000448971 ARMT1Q9H993 441 aa17.55■□□□□ 0.4
USP39-206ENST00000448971 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
USP39-206ENST00000448971 PALD1Q9ULE6 856 aa17.55■□□□□ 0.4
USP39-206ENST00000448971 SIPA1L1O43166 1804 aa17.54■□□□□ 0.4
USP39-206ENST00000448971 CHGBP05060 677 aa17.54■□□□□ 0.4
USP39-206ENST00000448971 UBE3CQ15386 1083 aa17.54■□□□□ 0.4
USP39-206ENST00000448971 LRRFIP1Q32MZ4 808 aaKnown RBP17.54■□□□□ 0.4
USP39-206ENST00000448971 FASTKD5Q7L8L6 764 aaKnown RBP17.54■□□□□ 0.4
USP39-206ENST00000448971 CHD1LQ86WJ1 897 aa17.54■□□□□ 0.4
USP39-206ENST00000448971 PICK1Q9NRD5 415 aa17.54■□□□□ 0.4
USP39-206ENST00000448971 PI4KBQ9UBF8 816 aa17.54■□□□□ 0.4
USP39-206ENST00000448971 HERC5Q9UII4 1024 aaKnown RBP17.54■□□□□ 0.4
USP39-206ENST00000448971 A0A0C4DFX4 3053 aa17.53■□□□□ 0.4
USP39-206ENST00000448971 TBC1D12O60347 775 aa17.53■□□□□ 0.4
USP39-206ENST00000448971 PDE1AP54750 535 aa17.53■□□□□ 0.4
USP39-206ENST00000448971 UBXN2AP68543 259 aa17.53■□□□□ 0.4
USP39-206ENST00000448971 SLAIN1Q8ND83 568 aa17.53■□□□□ 0.4
USP39-206ENST00000448971 U2AF1L4Q8WU68 220 aaKnown RBP17.53■□□□□ 0.4
USP39-206ENST00000448971 SDR42E1Q8WUS8 393 aa17.53■□□□□ 0.4
USP39-206ENST00000448971 UNC93B1Q9H1C4 597 aa17.53■□□□□ 0.4
USP39-206ENST00000448971 BIN2Q9UBW5 565 aaPredicted RBP17.53■□□□□ 0.4
USP39-206ENST00000448971 SLC45A1Q9Y2W3 748 aa17.53■□□□□ 0.4
USP39-206ENST00000448971 SGPL1O95470 568 aa17.52■□□□□ 0.4
USP39-206ENST00000448971 ZFYP08048 801 aaPredicted RBP17.52■□□□□ 0.4
USP39-206ENST00000448971 NUCB1Q02818 461 aa17.52■□□□□ 0.4
USP39-206ENST00000448971 HTATIP2Q9BUP3 242 aa17.52■□□□□ 0.4
USP39-206ENST00000448971 PTPRFP10586 1907 aa17.52■□□□□ 0.4
USP39-206ENST00000448971 COL6A3P12111 3177 aa17.52■□□□□ 0.39
USP39-206ENST00000448971 MYH1P12882 1939 aa17.51■□□□□ 0.39
USP39-206ENST00000448971 ADCY3O60266 1144 aa17.51■□□□□ 0.39
USP39-206ENST00000448971 CTNND1O60716 968 aaKnown RBP17.51■□□□□ 0.39
USP39-206ENST00000448971 POLR3DP05423 398 aaPredicted RBP17.51■□□□□ 0.39
USP39-206ENST00000448971 FLT3LGP49771 235 aa17.51■□□□□ 0.39
USP39-206ENST00000448971 TTC6Q86TZ1 520 aa17.51■□□□□ 0.39
USP39-206ENST00000448971 PXYLP1Q8TE99 480 aa17.51■□□□□ 0.39
USP39-206ENST00000448971 APPBP2Q92624 585 aa17.51■□□□□ 0.39
USP39-206ENST00000448971 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
USP39-206ENST00000448971 MCM9Q9NXL9 1143 aa17.51■□□□□ 0.39
USP39-206ENST00000448971 PHIPQ8WWQ0 1821 aa17.51■□□□□ 0.39
USP39-206ENST00000448971 RNF113AO15541 343 aaKnown RBP17.5■□□□□ 0.39
USP39-206ENST00000448971 GADL1Q6ZQY3 521 aa17.5■□□□□ 0.39
USP39-206ENST00000448971 PUS7LQ9H0K6 701 aaKnown RBP17.5■□□□□ 0.39
USP39-206ENST00000448971 DNAJC18Q9H819 358 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms