RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 SALL3Q9BXA9 1300 aa15.09■□□□□ 0.01
DDX56-206ENST00000446987 F8W031 263 aaPredicted RBP15.08■□□□□ 0.01
DDX56-206ENST00000446987 RBM43Q6ZSC3 357 aaKnown RBP15.08■□□□□ 0.01
DDX56-206ENST00000446987 LDHDQ86WU2 507 aa15.08■□□□□ 0.01
DDX56-206ENST00000446987 LRRC8AQ8IWT6 810 aa15.08■□□□□ 0.01
DDX56-206ENST00000446987 CLASRPQ8N2M8 674 aaKnown RBP15.08■□□□□ 0.01
DDX56-206ENST00000446987 ZNF384Q8TF68 577 aa15.08■□□□□ 0.01
DDX56-206ENST00000446987 CHMP4CQ96CF2 233 aa15.08■□□□□ 0.01
DDX56-206ENST00000446987 GDPD2Q9HCC8 539 aa15.08■□□□□ 0.01
DDX56-206ENST00000446987 PGAP2Q9UHJ9 254 aa15.08■□□□□ 0.01
DDX56-206ENST00000446987 H7C1D1 291 aa15.08■□□□□ 0
DDX56-206ENST00000446987 TRIM66O15016 1216 aa15.08■□□□□ 0
DDX56-206ENST00000446987 ACTN2P35609 894 aa15.08■□□□□ 0
DDX56-206ENST00000446987 MAP3K11Q16584 847 aa15.08■□□□□ 0
DDX56-206ENST00000446987 PNMA8AQ86V59 439 aaPredicted RBP15.08■□□□□ 0
DDX56-206ENST00000446987 DRC7Q8IY82 874 aa15.08■□□□□ 0
DDX56-206ENST00000446987 SPATA5Q8NB90 893 aa15.08■□□□□ 0
DDX56-206ENST00000446987 OTUD7AQ8TE49 926 aaPredicted RBP15.08■□□□□ 0
DDX56-206ENST00000446987 TBC1D22AQ8WUA7 517 aa15.08■□□□□ 0
DDX56-206ENST00000446987 SMARCE1Q969G3 411 aa15.08■□□□□ 0
DDX56-206ENST00000446987 TACO1Q9BSH4 297 aaKnown RBP15.08■□□□□ 0
DDX56-206ENST00000446987 GNL3LQ9NVN8 582 aaKnown RBP15.08■□□□□ 0
DDX56-206ENST00000446987 CNPY2Q9Y2B0 182 aa15.08■□□□□ 0
DDX56-206ENST00000446987 MRVI1Q9Y6F6 885 aa15.08■□□□□ 0
DDX56-206ENST00000446987 WDR66Q8TBY9 1149 aa15.07■□□□□ 0
DDX56-206ENST00000446987 KCNG1Q9UIX4 513 aa15.07■□□□□ 0
DDX56-206ENST00000446987 NDUFB9Q9Y6M9 179 aa15.07■□□□□ 0
DDX56-206ENST00000446987 WNT10BO00744 389 aa15.06■□□□□ 0
DDX56-206ENST00000446987 UQCRFS1P1P0C7P4 283 aa15.06■□□□□ 0
DDX56-206ENST00000446987 TYRO3Q06418 890 aa15.06■□□□□ 0
DDX56-206ENST00000446987 TRDNQ13061 729 aa15.06■□□□□ 0
DDX56-206ENST00000446987 NBPF9Q3BBW0 867 aa15.06■□□□□ 0
DDX56-206ENST00000446987 TTC39AQ5SRH9 613 aa15.06■□□□□ 0
DDX56-206ENST00000446987 GORABQ5T7V8 394 aa15.06■□□□□ 0
DDX56-206ENST00000446987 CCAR2Q8N163 923 aaKnown RBP15.06■□□□□ 0
DDX56-206ENST00000446987 MSL3Q8N5Y2 521 aaKnown RBP15.06■□□□□ 0
DDX56-206ENST00000446987 MTMR14Q8NCE2 650 aa15.06■□□□□ 0
DDX56-206ENST00000446987 ZNF592Q92610 1267 aa15.06■□□□□ 0
DDX56-206ENST00000446987 TRIM5Q9C035 493 aa15.06■□□□□ 0
DDX56-206ENST00000446987 SNRKQ9NRH2 765 aa15.06■□□□□ 0
DDX56-206ENST00000446987 CLIP2Q9UDT6 1046 aa15.06■□□□□ 0
DDX56-206ENST00000446987 LCMT1Q9UIC8 334 aa15.06■□□□□ 0
DDX56-206ENST00000446987 TTF2Q9UNY4 1162 aaKnown RBP15.06■□□□□ 0
DDX56-206ENST00000446987 TRPM7Q96QT4 1865 aa15.06■□□□□ 0
DDX56-206ENST00000446987 F13A1P00488 732 aa15.06■□□□□ 0
DDX56-206ENST00000446987 ZAP70P43403 619 aa15.06■□□□□ 0
DDX56-206ENST00000446987 TSGA10IPQ3SY00 556 aa15.06■□□□□ 0
DDX56-206ENST00000446987 RBM26Q5T8P6 1007 aaKnown RBP15.06■□□□□ 0
DDX56-206ENST00000446987 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
DDX56-206ENST00000446987 MCTP2Q6DN12 878 aa15.06■□□□□ 0
DDX56-206ENST00000446987 CHADLQ6NUI6 762 aa15.06■□□□□ 0
DDX56-206ENST00000446987 C16orf71Q8IYS4 520 aaPredicted RBP15.06■□□□□ 0
DDX56-206ENST00000446987 SUGT1Q9Y2Z0 365 aa15.06■□□□□ 0
DDX56-206ENST00000446987 MYH7P12883 1935 aa15.05■□□□□ 0
DDX56-206ENST00000446987 CCDC196A0A1B0GTZ2 297 aa15.05■□□□□ -0
DDX56-206ENST00000446987 ITGBL1O95965 494 aaPredicted RBP15.05■□□□□ -0
DDX56-206ENST00000446987 CCDC158Q5M9N0 1113 aa15.05■□□□□ -0
DDX56-206ENST00000446987 CXorf56Q9H5V9 222 aa15.05■□□□□ -0
DDX56-206ENST00000446987 GGA3Q9NZ52 723 aa15.05■□□□□ -0
DDX56-206ENST00000446987 MKRN1Q9UHC7 482 aaKnown RBP15.05■□□□□ -0
DDX56-206ENST00000446987 CDK5RAP2Q96SN8 1893 aa15.04■□□□□ -0
DDX56-206ENST00000446987 SPDYE2BA6NHP3 402 aa15.04■□□□□ -0
DDX56-206ENST00000446987 IFIT2P09913 472 aaKnown RBP15.04■□□□□ -0
DDX56-206ENST00000446987 SPDYE6P0CI01 402 aa15.04■□□□□ -0
DDX56-206ENST00000446987 GYS2P54840 703 aa15.04■□□□□ -0
DDX56-206ENST00000446987 FMR1Q06787 632 aaKnown RBP eCLIP15.04■□□□□ -0
DDX56-206ENST00000446987 DIXDC1Q155Q3 683 aa15.04■□□□□ -0
DDX56-206ENST00000446987 CFAP100Q494V2 611 aa15.04■□□□□ -0
DDX56-206ENST00000446987 TSHZ3Q63HK5 1081 aa15.04■□□□□ -0
DDX56-206ENST00000446987 SMC1BQ8NDV3 1235 aa15.04■□□□□ -0
DDX56-206ENST00000446987 CBX8Q9HC52 389 aa15.04■□□□□ -0
DDX56-206ENST00000446987 PIH1D3Q9NQM4 214 aaKnown RBP15.04■□□□□ -0
DDX56-206ENST00000446987 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.04■□□□□ -0
DDX56-206ENST00000446987 PASKQ96RG2 1323 aa15.04■□□□□ -0
DDX56-206ENST00000446987 STX6O43752 255 aa15.03■□□□□ -0
DDX56-206ENST00000446987 CRKP46108 304 aa15.03■□□□□ -0
DDX56-206ENST00000446987 GSDMDP57764 484 aa15.03■□□□□ -0
DDX56-206ENST00000446987 C1QTNF8P60827 252 aa15.03■□□□□ -0
DDX56-206ENST00000446987 ERCC6LQ2NKX8 1250 aa15.03■□□□□ -0
DDX56-206ENST00000446987 NBPF20Q3BBV1 942 aa15.03■□□□□ -0
DDX56-206ENST00000446987 DLK2Q6UY11 383 aa15.03■□□□□ -0
DDX56-206ENST00000446987 REXO1L1PQ8IX06 675 aa15.03■□□□□ -0
DDX56-206ENST00000446987 CNPY4Q8N129 248 aa15.03■□□□□ -0
DDX56-206ENST00000446987 OGFOD1Q8N543 542 aa15.03■□□□□ -0
DDX56-206ENST00000446987 ZC3H15Q8WU90 426 aaKnown RBP15.03■□□□□ -0
DDX56-206ENST00000446987 PRMT6Q96LA8 375 aaPredicted RBP15.03■□□□□ -0
DDX56-206ENST00000446987 NUP62CLQ9H1M0 184 aa15.03■□□□□ -0
DDX56-206ENST00000446987 ORC3Q9UBD5 711 aaPredicted RBP15.03■□□□□ -0
DDX56-206ENST00000446987 NRBP1Q9UHY1 535 aa15.03■□□□□ -0
DDX56-206ENST00000446987 SERPINA10Q9UK55 444 aa15.03■□□□□ -0
DDX56-206ENST00000446987 OAS2P29728 719 aaKnown RBP15.03■□□□□ -0
DDX56-206ENST00000446987 FSTL1Q12841 308 aa15.03■□□□□ -0
DDX56-206ENST00000446987 ARHGAP29Q52LW3 1261 aa15.03■□□□□ -0
DDX56-206ENST00000446987 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
DDX56-206ENST00000446987 LEKR1Q6ZMV7 388 aa15.03■□□□□ -0
DDX56-206ENST00000446987 MMS22LQ6ZRQ5 1243 aa15.03■□□□□ -0
DDX56-206ENST00000446987 PACS2Q86VP3 889 aa15.03■□□□□ -0
DDX56-206ENST00000446987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.03■□□□□ -0
DDX56-206ENST00000446987 EDC3Q96F86 508 aaKnown RBP15.03■□□□□ -0
DDX56-206ENST00000446987 HDAC9Q9UKV0 1011 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms