RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 DYNC1I2Q13409 638 aaKnown RBP8.75□□□□□ -1.01
SMG1-202ENST00000446231 MYSM1Q5VVJ2 828 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 PACS2Q86VP3 889 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 PGBD1Q96JS3 809 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 CABP5Q9NP86 173 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 DRP2Q13474 957 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 PCDHA5Q9Y5H7 936 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 PTPN21Q16825 1174 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 GRIPAP1Q4V328 841 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 VWA3AA6NCI4 1184 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 ACTN4O43707 911 aaKnown RBP8.75□□□□□ -1.01
SMG1-202ENST00000446231 PDCLQ13371 301 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 FYB2Q5VWT5 728 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 CCDC62Q6P9F0 684 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 TRIML1Q8N9V2 468 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 TBC1D8O95759 1140 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 UBE3BQ7Z3V4 1068 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 CCDC170Q8IYT3 715 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 POLR3EQ9NVU0 708 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 CLIC4Q9Y696 253 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 CDK13Q14004 1512 aaKnown RBP8.75□□□□□ -1.01
SMG1-202ENST00000446231 EIF3HO15372 352 aaKnown RBP eCLIP8.75□□□□□ -1.015e-7■■■■□ 19.3
SMG1-202ENST00000446231 COPB1P53618 953 aaKnown RBP8.75□□□□□ -1.01
SMG1-202ENST00000446231 BIRC3Q13489 604 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 PPP2R5EQ16537 467 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 KRT12Q99456 494 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 SERTAD1Q9UHV2 236 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 MTUS1Q9ULD2 1270 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 SCP2P22307 547 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 SLC39A14Q15043 492 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 CDC5LQ99459 802 aaKnown RBP8.74□□□□□ -1.01
SMG1-202ENST00000446231 AK9Q5TCS8 1911 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 GMNCA6NCL1 334 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 WASLO00401 505 aaPredicted RBP8.74□□□□□ -1.01
SMG1-202ENST00000446231 ENC1O14682 589 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 EHHADHQ08426 723 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 TAOK1Q7L7X3 1001 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 ENOX1Q8TC92 643 aaKnown RBP8.74□□□□□ -1.01
SMG1-202ENST00000446231 FERMT2Q96AC1 680 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 ARHGEF2Q92974 986 aaKnown RBP8.74□□□□□ -1.01
SMG1-202ENST00000446231 SBNO1A3KN83 1393 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 ATRXP46100 2492 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 KRT13P13646 458 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 ERMNQ8TAM6 284 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 ERCC6Q03468 1493 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 TFCP2Q12800 502 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 XAGE3Q8WTP9 111 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 TULP2O00295 520 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 CABP4P57796 275 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 HOMER2Q9NSB8 354 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 RESTQ13127 1097 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 ADCK5Q3MIX3 580 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 CCT8L2Q96SF2 557 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 EPN3Q9H201 632 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 CALML3P27482 149 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 VSNL1P62760 191 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 CCZ1BP86790 482 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 CCZ1P86791 482 aaPredicted RBP8.74□□□□□ -1.01
SMG1-202ENST00000446231 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 MAP4K1Q92918 833 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 UBA5Q9GZZ9 404 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 HAUS2Q9NVX0 235 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 POLE2P56282 527 aa8.74□□□□□ -1.01
SMG1-202ENST00000446231 BAG2O95816 211 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 NR1D1P20393 614 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 KCNJ6P48051 423 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 HHATQ5VTY9 493 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 ARHGAP24Q8N264 748 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 TRAF1Q13077 416 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 SYCE1Q8N0S2 351 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 LINS1Q8NG48 757 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 FTOQ9C0B1 505 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMG1-202ENST00000446231 CCDC169A6NNP5 214 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 HIBCHQ6NVY1 386 aaPredicted RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 MAN1B1Q9UKM7 699 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 TCP1P17987 556 aaKnown RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 ARMC9Q7Z3E5 817 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 ANGEL1Q9UNK9 670 aaKnown RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 ATP5J2-PTCD1G3V325 749 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 PTCD1O75127 700 aaKnown RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 IRAK1P51617 712 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 USP14P54578 494 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 RAPGEF1Q13905 1077 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 MAP3K7O43318 606 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 N4BP1O75113 896 aaKnown RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 EVA1CP58658 441 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 PSMD2Q13200 908 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 IQCB1Q15051 598 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 CCDC84Q86UT8 332 aaPredicted RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 NSUN7Q8NE18 718 aaKnown RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 CUL5Q93034 780 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 HPCAL4Q9UM19 191 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 BEND6Q5SZJ8 279 aaPredicted RBP8.73□□□□□ -1.01
SMG1-202ENST00000446231 H7C1D1 291 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 PPFIA2O75334 1257 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 ASIC2Q16515 512 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 MPRIPQ6WCQ1 1025 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 C19orf44Q9H6X5 657 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 LCMT1Q9UIC8 334 aa8.73□□□□□ -1.01
SMG1-202ENST00000446231 TCOF1Q13428 1488 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms