RNA–Protein interactions for RNA: ENST00000445924.5

ARPC1B-210, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-210ENST00000445924 ANTXR2P58335 489 aa16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 GABPAQ06546 454 aa16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 TOB2Q14106 344 aaPredicted RBP16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 PNMA8AQ86V59 439 aaPredicted RBP16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 ZSCAN10Q96SZ4 725 aaPredicted RBP16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 AGXT2Q9BYV1 514 aa16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 GGA3Q9NZ52 723 aa16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 TACC3Q9Y6A5 838 aa16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 SIPA1L1O43166 1804 aa16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 TNKSO95271 1327 aa16.44■□□□□ 0.22
ARPC1B-210ENST00000445924 SMIM22K7EJ46 135 aa16.43■□□□□ 0.22
ARPC1B-210ENST00000445924 EVX2Q03828 476 aa16.43■□□□□ 0.22
ARPC1B-210ENST00000445924 FAM47AQ5JRC9 791 aa16.43■□□□□ 0.22
ARPC1B-210ENST00000445924 IFIT1BQ5T764 474 aaKnown RBP16.43■□□□□ 0.22
ARPC1B-210ENST00000445924 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
ARPC1B-210ENST00000445924 SLC44A5Q8NCS7 719 aa16.43■□□□□ 0.22
ARPC1B-210ENST00000445924 TMX3Q96JJ7 454 aa16.43■□□□□ 0.22
ARPC1B-210ENST00000445924 ZKSCAN3Q9BRR0 538 aa16.43■□□□□ 0.22
ARPC1B-210ENST00000445924 TMEM39BQ9GZU3 492 aa16.43■□□□□ 0.22
ARPC1B-210ENST00000445924 DEFB129Q9H1M3 183 aa16.43■□□□□ 0.22
ARPC1B-210ENST00000445924 MPHOSPH10O00566 681 aaKnown RBP16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 TBC1D12O60347 775 aa16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 APOBRQ0VD83 1088 aa16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 CERKLQ49MI3 558 aaPredicted RBP16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 DCAF15Q66K64 600 aa16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 SULF1Q8IWU6 871 aa16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 NEDD1Q8NHV4 660 aa16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 IGDCC4Q8TDY8 1250 aa16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 ZC3H15Q8WU90 426 aaKnown RBP16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 ZNF274Q96GC6 653 aaPredicted RBP16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 SLKQ9H2G2 1235 aaPredicted RBP16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 CABP5Q9NP86 173 aa16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 TCP11L1Q9NUJ3 509 aa16.42■□□□□ 0.22
ARPC1B-210ENST00000445924 KLF18A0A0U1RQI7 1052 aa16.41■□□□□ 0.22
ARPC1B-210ENST00000445924 SHMT1P34896 483 aa16.41■□□□□ 0.22
ARPC1B-210ENST00000445924 SGMS1Q86VZ5 419 aa16.41■□□□□ 0.22
ARPC1B-210ENST00000445924 METTL16Q86W50 562 aaKnown RBP16.41■□□□□ 0.22
ARPC1B-210ENST00000445924 LARP6Q9BRS8 491 aaKnown RBP16.41■□□□□ 0.22
ARPC1B-210ENST00000445924 TPCN1Q9ULQ1 816 aa16.41■□□□□ 0.22
ARPC1B-210ENST00000445924 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.41■□□□□ 0.22
ARPC1B-210ENST00000445924 SLC12A7Q9Y666 1083 aa16.41■□□□□ 0.22
ARPC1B-210ENST00000445924 POLR2AP24928 1970 aaKnown RBP16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 PLIN4Q96Q06 1357 aa16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 DHX16O60231 1041 aaKnown RBP16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 SLC4A3P48751 1232 aa16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 HIRAP54198 1017 aaPredicted RBP16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 SUPT20HL1Q3ZLR7 823 aa16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 EAPPQ56P03 285 aaPredicted RBP16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 CATIPQ7Z7H3 387 aa16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 DGKHQ86XP1 1220 aa16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 TAF1DQ9H5J8 278 aaPredicted RBP16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 KAT14Q9H8E8 782 aa16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 LY9Q9HBG7 655 aa16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 ASTN2O75129 1339 aaPredicted RBP16.4■□□□□ 0.22
ARPC1B-210ENST00000445924 SRCAPQ6ZRS2 3230 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 GOLGA8BA8MQT2 603 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 ZBTB43O43298 467 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 CALM1P0DP23 149 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 CALM2P0DP24 149 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 CALM3P0DP25 149 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 EVCP57679 992 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 STK3Q13188 491 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 COL9A3Q14050 684 aaPredicted RBP16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 SEC23AQ15436 765 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 ME3Q16798 604 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 ABCB5Q2M3G0 1257 aa16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 CPLX2Q6PUV4 134 aaKnown RBP16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 ENAHQ8N8S7 591 aaPredicted RBP16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 INTS4Q96HW7 963 aaKnown RBP16.39■□□□□ 0.21
ARPC1B-210ENST00000445924 PFKFB2O60825 505 aa16.38■□□□□ 0.21
ARPC1B-210ENST00000445924 VEGFAP15692 232 aaPredicted RBP16.38■□□□□ 0.21
ARPC1B-210ENST00000445924 NF2P35240 595 aa16.38■□□□□ 0.21
ARPC1B-210ENST00000445924 RCAN1P53805 252 aa16.38■□□□□ 0.21
ARPC1B-210ENST00000445924 CUL4AQ13619 759 aa16.38■□□□□ 0.21
ARPC1B-210ENST00000445924 TMEM179Q6ZVK1 233 aa16.38■□□□□ 0.21
ARPC1B-210ENST00000445924 STX8Q9UNK0 236 aa16.38■□□□□ 0.21
ARPC1B-210ENST00000445924 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
ARPC1B-210ENST00000445924 MYH4Q9Y623 1939 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 CCDC196A0A1B0GTZ2 297 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 FAM196BA6NMK8 535 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 CPLX1O14810 134 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 AKR1B1P15121 316 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 PDIA3P30101 505 aaKnown RBP16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.212e-6■□□□□ 10.9
ARPC1B-210ENST00000445924 PPP2R5BQ15173 497 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 APOA5Q6Q788 366 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 MIGA2Q7L4E1 593 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 KRT26Q7Z3Y9 468 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 CCDC83Q8IWF9 413 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 ZNF654Q8IZM8 581 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 SPRYD3Q8NCJ5 442 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 ANKS1AQ92625 1134 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 GTF3C6Q969F1 213 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 TEPSINQ96N21 525 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 ZNF341Q9BYN7 854 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 DNAJC18Q9H819 358 aa16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 CWC22Q9HCG8 908 aaKnown RBP16.37■□□□□ 0.21
ARPC1B-210ENST00000445924 GPHNQ9NQX3 736 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms