RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 BTBD11A6QL63 1104 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 TLR3O15455 904 aaKnown RBP8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 KCNA5P22460 613 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 ICAM3P32942 547 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 SOWAHCQ53LP3 525 aaPredicted RBP8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 KIF28PB7ZC32 967 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 SLC30A4O14863 429 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 GPTP24298 496 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 RFC2P35250 354 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 PTPROQ16827 1216 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 ASTLQ6HA08 431 aaPredicted RBP8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 AEBP1Q8IUX7 1158 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 RALYQ9UKM9 306 aaKnown RBP8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 ASH1LQ9NR48 2969 aaKnown RBP8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 ELP1O95163 1332 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 CDK5RAP2Q96SN8 1893 aa8.54□□□□□ -1.04
BRAFP1-201ENST00000445336 SLC15A5A6NIM6 579 aa8.53□□□□□ -1.04
BRAFP1-201ENST00000445336 PRMT6Q96LA8 375 aaPredicted RBP8.53□□□□□ -1.04
BRAFP1-201ENST00000445336 MOXD2PA6NHM9 499 aa8.53□□□□□ -1.04
BRAFP1-201ENST00000445336 SEPT4O43236 478 aa8.53□□□□□ -1.04
BRAFP1-201ENST00000445336 GTF2IP78347 998 aa8.53□□□□□ -1.04
BRAFP1-201ENST00000445336 CCDC105Q8IYK2 499 aa8.53□□□□□ -1.04
BRAFP1-201ENST00000445336 NETO1Q8TDF5 533 aa8.53□□□□□ -1.04
BRAFP1-201ENST00000445336 CARD11Q9BXL7 1154 aa8.53□□□□□ -1.04
BRAFP1-201ENST00000445336 DOCK2Q92608 1830 aa8.53□□□□□ -1.04
BRAFP1-201ENST00000445336 ERVK-21P61565 698 aa8.52□□□□□ -1.04
BRAFP1-201ENST00000445336 MTHFSDQ2M296 383 aaKnown RBP8.52□□□□□ -1.04
BRAFP1-201ENST00000445336 SECISBP2LQ93073 1101 aaKnown RBP8.52□□□□□ -1.04
BRAFP1-201ENST00000445336 ZMIZ1Q9ULJ6 1067 aa8.52□□□□□ -1.04
BRAFP1-201ENST00000445336 AFG3L2Q9Y4W6 797 aa8.52□□□□□ -1.04
BRAFP1-201ENST00000445336 ATP2A2P16615 1042 aaKnown RBP8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 KIAA0825Q8IV33 1275 aa8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 ANKRD13CQ8N6S4 541 aa8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 IL17REQ8NFR9 667 aa8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 RXFP3Q9NSD7 469 aa8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 CAPN8A6NHC0 703 aa8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 MBTPS2O43462 519 aa8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 HTATSF1O43719 755 aaKnown RBP8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 CYP2B6P20813 491 aa8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 CDK7P50613 346 aa8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 ADAM32Q8TC27 787 aa8.52□□□□□ -1.05
BRAFP1-201ENST00000445336 MAP1BP46821 2468 aaKnown RBP8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 EPOPA6NHQ4 379 aa8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 ADCYAP1R1P41586 468 aa8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 PTPN21Q16825 1174 aa8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 PLEKHH3Q7Z736 793 aa8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 PNISRQ8TF01 805 aaKnown RBP8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 MRPL38Q96DV4 380 aaKnown RBP8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 LRP3O75074 770 aa8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 ACTN1P12814 892 aa8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 LSM14AQ8ND56 463 aaKnown RBP8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 NUP133Q8WUM0 1156 aa8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 L3MBTL2Q969R5 705 aa8.51□□□□□ -1.05
BRAFP1-201ENST00000445336 CYSRT1A8MQ03 144 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 CCR10P46092 362 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 TRIM28Q13263 835 aaKnown RBP8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 RTP3Q9BQQ7 232 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 PRRC2BQ5JSZ5 2229 aaKnown RBP8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 STXBP3O00186 592 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 BAIAP3O94812 1187 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 HCLS1P14317 486 aaPredicted RBP8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 ATF7P17544 494 aaPredicted RBP8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 SH3D19Q5HYK7 790 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 RNF180Q86T96 592 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 SCYL3Q8IZE3 742 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 KIF12Q96FN5 646 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 LMAN2LQ9H0V9 348 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 TRMT112Q9UI30 125 aaKnown RBP8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 MUC3AQ02505 3323 aa8.5□□□□□ -1.05
BRAFP1-201ENST00000445336 EYA4O95677 639 aa8.49□□□□□ -1.05
BRAFP1-201ENST00000445336 IL1R1P14778 569 aa8.49□□□□□ -1.05
BRAFP1-201ENST00000445336 TTLL7Q6ZT98 887 aa8.49□□□□□ -1.05
BRAFP1-201ENST00000445336 ZFHX2Q9C0A1 2572 aaPredicted RBP8.49□□□□□ -1.05
BRAFP1-201ENST00000445336 MAP3K10Q02779 954 aa8.49□□□□□ -1.05
BRAFP1-201ENST00000445336 CTC1Q2NKJ3 1217 aa8.49□□□□□ -1.05
BRAFP1-201ENST00000445336 GJC2Q5T442 439 aaPredicted RBP8.49□□□□□ -1.05
BRAFP1-201ENST00000445336 ANKRD2Q9GZV1 360 aa8.49□□□□□ -1.05
BRAFP1-201ENST00000445336 FASNP49327 2511 aaKnown RBP8.49□□□□□ -1.05
BRAFP1-201ENST00000445336 LAMA3Q16787 3333 aa8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 SPTLC1O15269 473 aa8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 CST5P28325 142 aaPredicted RBP8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 C19orf57Q0VDD7 668 aa8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 UNQ6494/PRO21346Q6UXR6 183 aa8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 GPRC5AQ8NFJ5 357 aa8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 EDC3Q96F86 508 aaKnown RBP8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 TMOD2Q9NZR1 351 aa8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 PCDHGC5Q9Y5F6 944 aa8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 CA3P07451 260 aa8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 PPM1JQ5JR12 505 aa8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 TMEM105Q8N8V8 129 aa8.48□□□□□ -1.05
BRAFP1-201ENST00000445336 A0A1W2PQ45 241 aaPredicted RBP8.47□□□□□ -1.05
BRAFP1-201ENST00000445336 A0A1W2PQY0 241 aa8.47□□□□□ -1.05
BRAFP1-201ENST00000445336 CSF2RAP15509 400 aa8.47□□□□□ -1.05
BRAFP1-201ENST00000445336 HOXA7P31268 230 aaPredicted RBP8.47□□□□□ -1.05
BRAFP1-201ENST00000445336 NKX3-2P78367 333 aa8.47□□□□□ -1.05
BRAFP1-201ENST00000445336 RING1Q06587 406 aa8.47□□□□□ -1.05
BRAFP1-201ENST00000445336 FSD2A1L4K1 749 aa8.47□□□□□ -1.05
BRAFP1-201ENST00000445336 ARHGAP6O43182 974 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms