RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 CLGNO14967 610 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 GNAQP50148 359 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 RASGRF1Q13972 1273 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 NEK11Q8NG66 645 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 TBC1D22AQ8WUA7 517 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 PLIN2Q99541 437 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 MRVI1Q9Y6F6 885 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 DLG5Q8TDM6 1919 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 CPXCR1Q8N123 301 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
TOP3B-210ENST00000444502 WDHD1O75717 1129 aaPredicted RBP12.02□□□□□ -0.48
TOP3B-210ENST00000444502 MATR3P43243 847 aaKnown RBP eCLIP12.02□□□□□ -0.489e-6■■□□□ 12
TOP3B-210ENST00000444502 BTDP43251 543 aa12.02□□□□□ -0.48
TOP3B-210ENST00000444502 ZNF75DP51815 510 aa12.02□□□□□ -0.48
TOP3B-210ENST00000444502 STX17P56962 302 aa12.02□□□□□ -0.48
TOP3B-210ENST00000444502 ZFYVE27Q5T4F4 411 aa12.02□□□□□ -0.48
TOP3B-210ENST00000444502 CLEC4GQ6UXB4 293 aa12.02□□□□□ -0.48
TOP3B-210ENST00000444502 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.48
TOP3B-210ENST00000444502 FCHSD1Q86WN1 690 aa12.02□□□□□ -0.48
TOP3B-210ENST00000444502 NF2P35240 595 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 COL9A3Q14050 684 aaPredicted RBP12.02□□□□□ -0.49
TOP3B-210ENST00000444502 TNIP1Q15025 636 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 UBE3CQ15386 1083 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 RAB34Q9BZG1 259 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 OVOS2A0A0G2JMS6 1433 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 SPATA31A5Q5VU36 1347 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 SPATA31A7Q8IWB4 1347 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 TRIM75PA6NK02 468 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 TERF2Q15554 542 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 ATL3Q6DD88 541 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 PGBD1Q96JS3 809 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 PKD2L1Q9P0L9 805 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 NRBP1Q9UHY1 535 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 CARMIL3Q8ND23 1372 aa12.02□□□□□ -0.49
TOP3B-210ENST00000444502 CYP2D7A0A087X1C5 515 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 BTBD18B2RXH4 712 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 HNRNPH2P55795 449 aaKnown RBP12.01□□□□□ -0.49
TOP3B-210ENST00000444502 PPARAQ07869 468 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 CT47A1Q5JQC4 288 aaPredicted RBP12.01□□□□□ -0.49
TOP3B-210ENST00000444502 FNBP4Q8N3X1 1017 aaPredicted RBP12.01□□□□□ -0.49
TOP3B-210ENST00000444502 SMARCC2Q8TAQ2 1214 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 SCLT1Q96NL6 688 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 CLIC6Q96NY7 704 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 MON2Q7Z3U7 1717 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 PEAK1Q9H792 1746 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 MCM7P33993 719 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 NDUFA8P51970 172 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 ZNF174Q15697 407 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 KRBA2Q6ZNG9 492 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 TMEM87AQ8NBN3 555 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 PDLIM2Q96JY6 352 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 PARP1P09874 1014 aaKnown RBP12.01□□□□□ -0.49
TOP3B-210ENST00000444502 APOA5Q6Q788 366 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 CNKSR2Q8WXI2 1034 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 RRP36Q96EU6 259 aaKnown RBP12.01□□□□□ -0.49
TOP3B-210ENST00000444502 ST7Q9NRC1 585 aa12.01□□□□□ -0.49
TOP3B-210ENST00000444502 BBOX1O75936 387 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 ADALQ6DHV7 355 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 KRI1Q8N9T8 703 aaKnown RBP12□□□□□ -0.49
TOP3B-210ENST00000444502 SUPT20HQ8NEM7 779 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 VPS54Q9P1Q0 977 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 CALM1P0DP23 149 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 CALM2P0DP24 149 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 CALM3P0DP25 149 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 SLC1A4P43007 532 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 CACNB3P54284 484 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 LCORLQ8N3X6 602 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 KIF18AQ8NI77 898 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 ENOX2Q16206 610 aaKnown RBP12□□□□□ -0.49
TOP3B-210ENST00000444502 STAMQ92783 540 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 KCNH3Q9ULD8 1083 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 PYCARDQ9ULZ3 195 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 ELP1O95163 1332 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 RTL9Q8NET4 1388 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 MED23Q9ULK4 1368 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 POLR2DO15514 142 aaKnown RBP12□□□□□ -0.49
TOP3B-210ENST00000444502 GOLGA8HP0CJ92 632 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 PRDX5P30044 214 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
TOP3B-210ENST00000444502 CCDC148Q8NFR7 591 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 HOMER2Q9NSB8 354 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 ZSWIM5Q9P217 1185 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 RCOR1Q9UKL0 485 aa12□□□□□ -0.49
TOP3B-210ENST00000444502 URI1O94763 535 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-210ENST00000444502 PFKFB1P16118 471 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 GSDMDP57764 484 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 GRAPQ13588 217 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 CEP135Q66GS9 1140 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 EP400NLQ6ZTU2 488 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 ZNF654Q8IZM8 581 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 GRAPLQ8TC17 118 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-210ENST00000444502 MINPP1Q9UNW1 487 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 H7C1D1 291 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 CHRNA5P30532 468 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 LMAN1P49257 510 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 LETM2Q2VYF4 491 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 C11orf57Q6ZUT1 292 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-210ENST00000444502 TBC1D10CQ8IV04 446 aa11.99□□□□□ -0.49
TOP3B-210ENST00000444502 RIPOR2Q9Y4F9 1068 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms