RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 SLC9C2Q5TAH2 1124 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 TMED8Q6PL24 325 aaPredicted RBP16.96■□□□□ 0.31
TREX1-202ENST00000444177 CERS3Q8IU89 383 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 GPATCH3Q96I76 525 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 HAUS7Q99871 368 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 PNMA3Q9UL41 463 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 GABRQQ9UN88 632 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 CEP290O15078 2479 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 USP5P45974 858 aa16.95■□□□□ 0.3
TREX1-202ENST00000444177 PABPC4Q13310 644 aaKnown RBP eCLIP16.95■□□□□ 0.3
TREX1-202ENST00000444177 MTFR1Q15390 333 aa16.95■□□□□ 0.3
TREX1-202ENST00000444177 ANKRD13CQ8N6S4 541 aa16.95■□□□□ 0.3
TREX1-202ENST00000444177 ECHDC1Q9NTX5 307 aa16.95■□□□□ 0.3
TREX1-202ENST00000444177 GINM1Q9NU53 330 aa16.95■□□□□ 0.3
TREX1-202ENST00000444177 SUPT16HQ9Y5B9 1047 aaKnown RBP16.95■□□□□ 0.3
TREX1-202ENST00000444177 ZNF532Q9HCE3 1301 aa16.95■□□□□ 0.3
TREX1-202ENST00000444177 SIPA1L1O43166 1804 aa16.94■□□□□ 0.3
TREX1-202ENST00000444177 GDF11O95390 407 aa16.94■□□□□ 0.3
TREX1-202ENST00000444177 BACE1P56817 501 aa16.94■□□□□ 0.3
TREX1-202ENST00000444177 SHROOM1Q2M3G4 852 aaPredicted RBP16.94■□□□□ 0.3
TREX1-202ENST00000444177 TSHZ3Q63HK5 1081 aa16.94■□□□□ 0.3
TREX1-202ENST00000444177 ASCC2Q9H1I8 757 aaPredicted RBP16.94■□□□□ 0.3
TREX1-202ENST00000444177 BIN2Q9UBW5 565 aaPredicted RBP16.94■□□□□ 0.3
TREX1-202ENST00000444177 RBBP6Q7Z6E9 1792 aaKnown RBP16.94■□□□□ 0.3
TREX1-202ENST00000444177 NAV1Q8NEY1 1877 aa16.93■□□□□ 0.3
TREX1-202ENST00000444177 MAGEB6P1A0A0J9YX57 407 aa16.93■□□□□ 0.3
TREX1-202ENST00000444177 TNPO2O14787 897 aaKnown RBP16.93■□□□□ 0.3
TREX1-202ENST00000444177 SLC34A2O95436 690 aa16.93■□□□□ 0.3
TREX1-202ENST00000444177 GCLCP48506 637 aaPredicted RBP16.93■□□□□ 0.3
TREX1-202ENST00000444177 FLT3LGP49771 235 aa16.93■□□□□ 0.3
TREX1-202ENST00000444177 MTMR2Q13614 643 aa16.93■□□□□ 0.3
TREX1-202ENST00000444177 AAMPQ13685 434 aa16.93■□□□□ 0.3
TREX1-202ENST00000444177 RIOK1Q9BRS2 568 aaKnown RBP16.93■□□□□ 0.3
TREX1-202ENST00000444177 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.93■□□□□ 0.3
TREX1-202ENST00000444177 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
TREX1-202ENST00000444177 ZBTB21Q9ULJ3 1066 aa16.93■□□□□ 0.3
TREX1-202ENST00000444177 MYH7P12883 1935 aa16.92■□□□□ 0.3
TREX1-202ENST00000444177 C19orf81C9J6K1 198 aa16.92■□□□□ 0.3
TREX1-202ENST00000444177 USP17L10C9JJH3 530 aa16.92■□□□□ 0.3
TREX1-202ENST00000444177 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
TREX1-202ENST00000444177 FAM110CQ1W6H9 321 aa16.92■□□□□ 0.3
TREX1-202ENST00000444177 TTC6Q86TZ1 520 aa16.92■□□□□ 0.3
TREX1-202ENST00000444177 SLAIN1Q8ND83 568 aa16.92■□□□□ 0.3
TREX1-202ENST00000444177 EXOC6Q8TAG9 804 aa16.92■□□□□ 0.3
TREX1-202ENST00000444177 TMOD4Q9NZQ9 345 aa16.92■□□□□ 0.3
TREX1-202ENST00000444177 DDX60LQ5H9U9 1706 aaKnown RBP16.92■□□□□ 0.3
TREX1-202ENST00000444177 ATAD5Q96QE3 1844 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 DOCK3Q8IZD9 2030 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 TCRBV5S4A2TA0A5A2 114 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 ADCY3O60266 1144 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 CCL5P13501 91 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 HOXA7P31268 230 aaPredicted RBP16.91■□□□□ 0.3
TREX1-202ENST00000444177 ADD2P35612 726 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 UBXN2AP68543 259 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 IRF5Q13568 498 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 TATDN1Q6P1N9 297 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 COA7Q96BR5 231 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 EHD4Q9H223 541 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 SERPINB13Q9UIV8 391 aa16.91■□□□□ 0.3
TREX1-202ENST00000444177 MYH1P12882 1939 aa16.9■□□□□ 0.3
TREX1-202ENST00000444177 GH2P01242 217 aa16.9■□□□□ 0.3
TREX1-202ENST00000444177 GJB1P08034 283 aa16.9■□□□□ 0.3
TREX1-202ENST00000444177 SLFNL1Q499Z3 407 aa16.9■□□□□ 0.3
TREX1-202ENST00000444177 ANKRD45Q5TZF3 282 aa16.9■□□□□ 0.3
TREX1-202ENST00000444177 LCORLQ8N3X6 602 aa16.9■□□□□ 0.3
TREX1-202ENST00000444177 OTUD7AQ8TE49 926 aaPredicted RBP16.9■□□□□ 0.3
TREX1-202ENST00000444177 PXYLP1Q8TE99 480 aa16.9■□□□□ 0.3
TREX1-202ENST00000444177 P2RX7Q99572 595 aaKnown RBP16.9■□□□□ 0.3
TREX1-202ENST00000444177 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
TREX1-202ENST00000444177 RNF208Q9H0X6 261 aa16.9■□□□□ 0.3
TREX1-202ENST00000444177 MGAMO43451 1857 aa16.9■□□□□ 0.3
TREX1-202ENST00000444177 ELNP15502 786 aa16.89■□□□□ 0.29
TREX1-202ENST00000444177 PLCD1P51178 756 aa16.89■□□□□ 0.29
TREX1-202ENST00000444177 IRX3P78415 501 aaPredicted RBP16.89■□□□□ 0.29
TREX1-202ENST00000444177 ZSCAN25Q6NSZ9 544 aa16.89■□□□□ 0.29
TREX1-202ENST00000444177 NKX2-3Q8TAU0 364 aa16.89■□□□□ 0.29
TREX1-202ENST00000444177 SHISA4Q96DD7 197 aa16.89■□□□□ 0.29
TREX1-202ENST00000444177 ARMT1Q9H993 441 aa16.89■□□□□ 0.29
TREX1-202ENST00000444177 EMILIN3Q9NT22 766 aa16.89■□□□□ 0.29
TREX1-202ENST00000444177 TTC41PQ6P2S7 1318 aa16.89■□□□□ 0.29
TREX1-202ENST00000444177 ERC2O15083 957 aa16.88■□□□□ 0.29
TREX1-202ENST00000444177 MBD4O95243 580 aa16.88■□□□□ 0.29
TREX1-202ENST00000444177 CHGBP05060 677 aa16.88■□□□□ 0.29
TREX1-202ENST00000444177 POLR3DP05423 398 aaPredicted RBP16.88■□□□□ 0.29
TREX1-202ENST00000444177 GJA8P48165 433 aa16.88■□□□□ 0.29
TREX1-202ENST00000444177 CERKLQ49MI3 558 aaPredicted RBP16.88■□□□□ 0.29
TREX1-202ENST00000444177 USP17L2Q6R6M4 530 aa16.88■□□□□ 0.29
TREX1-202ENST00000444177 UNC93B1Q9H1C4 597 aa16.88■□□□□ 0.29
TREX1-202ENST00000444177 MORF4L1Q9UBU8 362 aa16.88■□□□□ 0.29
TREX1-202ENST00000444177 LOC285556D6RIA3 1793 aa16.87■□□□□ 0.29
TREX1-202ENST00000444177 INHAP05111 366 aa16.87■□□□□ 0.29
TREX1-202ENST00000444177 CENPBP07199 599 aaPredicted RBP16.87■□□□□ 0.29
TREX1-202ENST00000444177 MX1P20591 662 aa16.87■□□□□ 0.29
TREX1-202ENST00000444177 HERVK_113P62684 666 aa16.87■□□□□ 0.29
TREX1-202ENST00000444177 IRX6P78412 446 aaPredicted RBP16.87■□□□□ 0.29
TREX1-202ENST00000444177 UBE3CQ15386 1083 aa16.87■□□□□ 0.29
TREX1-202ENST00000444177 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
TREX1-202ENST00000444177 SDR42E1Q8WUS8 393 aa16.87■□□□□ 0.29
TREX1-202ENST00000444177 RWDD1Q9H446 243 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms