RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 RRP12Q5JTH9 1297 aaKnown RBP16.1■□□□□ 0.17
MCF2L-218ENST00000442625 CC2D2BQ6DHV5 1058 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 VPS18Q9P253 973 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 PKD1L3Q7Z443 1732 aa16.1■□□□□ 0.17
MCF2L-218ENST00000442625 WDR19Q8NEZ3 1342 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 FOXR1Q6PIV2 292 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 KIF6Q6ZMV9 814 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 TXLNBQ8N3L3 684 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 TTLL11Q8NHH1 800 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 AIDAQ96BJ3 306 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 TOMM22Q9NS69 142 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 ASAP1Q9ULH1 1129 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 PCDHB6Q9Y5E3 794 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 TNS3Q68CZ2 1445 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 CUTAO60888 179 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 TPM1P09493 284 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 ZNF18P17022 549 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 TXLNAP40222 546 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 RBL2Q08999 1139 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 FCHSD1Q86WN1 690 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 KRI1Q8N9T8 703 aaKnown RBP16.09■□□□□ 0.17
MCF2L-218ENST00000442625 ANKZF1Q9H8Y5 726 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 RAI14Q9P0K7 980 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 ZSWIM5Q9P217 1185 aa16.09■□□□□ 0.17
MCF2L-218ENST00000442625 C4AP0C0L4 1744 aa16.08■□□□□ 0.17
MCF2L-218ENST00000442625 C4BP0C0L5 1744 aa16.08■□□□□ 0.17
MCF2L-218ENST00000442625 ANKRD65E5RJM6 399 aa16.08■□□□□ 0.16
MCF2L-218ENST00000442625 IFIT3O14879 490 aaKnown RBP16.08■□□□□ 0.16
MCF2L-218ENST00000442625 AFMP43652 599 aa16.08■□□□□ 0.16
MCF2L-218ENST00000442625 CHMP4BP1P59074 171 aa16.08■□□□□ 0.16
MCF2L-218ENST00000442625 RABGGTAQ92696 567 aa16.08■□□□□ 0.16
MCF2L-218ENST00000442625 STAMQ92783 540 aa16.08■□□□□ 0.16
MCF2L-218ENST00000442625 CDC5LQ99459 802 aaKnown RBP16.08■□□□□ 0.16
MCF2L-218ENST00000442625 SLC12A7Q9Y666 1083 aa16.08■□□□□ 0.16
MCF2L-218ENST00000442625 ZNF142P52746 1687 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-218ENST00000442625 ADAMTSL3P82987 1691 aa16.08■□□□□ 0.16
MCF2L-218ENST00000442625 ZNF569Q5MCW4 686 aa16.08■□□□□ 0.16
MCF2L-218ENST00000442625 CREBRFQ8IUR6 639 aa16.08■□□□□ 0.16
MCF2L-218ENST00000442625 EPB41L4AQ9HCS5 686 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-218ENST00000442625 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
MCF2L-218ENST00000442625 FAM205CA6NFA0 338 aa16.07■□□□□ 0.16
MCF2L-218ENST00000442625 SSRP1Q08945 709 aaKnown RBP16.07■□□□□ 0.16
MCF2L-218ENST00000442625 DHX8Q14562 1220 aaKnown RBP16.07■□□□□ 0.16
MCF2L-218ENST00000442625 OXER1Q8TDS5 423 aa16.07■□□□□ 0.16
MCF2L-218ENST00000442625 WDR17Q8IZU2 1322 aa16.07■□□□□ 0.16
MCF2L-218ENST00000442625 PRKAB2O43741 272 aa16.07■□□□□ 0.16
MCF2L-218ENST00000442625 CDC25AP30304 524 aa16.07■□□□□ 0.16
MCF2L-218ENST00000442625 NOSTRINQ8IVI9 506 aa16.07■□□□□ 0.16
MCF2L-218ENST00000442625 ACRBPQ8NEB7 543 aa16.07■□□□□ 0.16
MCF2L-218ENST00000442625 STRBPQ96SI9 672 aaKnown RBP16.07■□□□□ 0.16
MCF2L-218ENST00000442625 PLEKHA4Q9H4M7 779 aa16.07■□□□□ 0.16
MCF2L-218ENST00000442625 ARMT1Q9H993 441 aa16.07■□□□□ 0.16
MCF2L-218ENST00000442625 hCG_1642624A0A1W2PR95 340 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 ANKRD18BA2A2Z9 1011 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 MBD4O95243 580 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 IL2RBP14784 551 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 CD44P16070 742 aaKnown RBP16.06■□□□□ 0.16
MCF2L-218ENST00000442625 SKIDA1Q1XH10 827 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 DIS3L2Q8IYB7 885 aaKnown RBP16.06■□□□□ 0.16
MCF2L-218ENST00000442625 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 ABCB6Q9NP58 842 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 NR1I3Q14994 352 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 UBE3CQ15386 1083 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 TMEM87BQ96K49 555 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 NAPBQ9H115 298 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.06■□□□□ 0.16
MCF2L-218ENST00000442625 FBXO2Q9UK22 296 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-218ENST00000442625 TBC1D2BQ9UPU7 963 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 ADGRG1Q9Y653 693 aa16.06■□□□□ 0.16
MCF2L-218ENST00000442625 A0A087X0B3 334 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 FAM237AA0A1B0GTK4 181 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 TCRBV5S4A2TA0A5A2 114 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-218ENST00000442625 IRF6O14896 467 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 CCDC175P0C221 793 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 CTSWP56202 376 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 GPS2Q13227 327 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 VGLL2Q8N8G2 317 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 IGSF22Q8N9C0 903 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 PLA2G12BQ9BX93 195 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 IRS4O14654 1257 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-218ENST00000442625 PDE8BO95263 885 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 MORC3Q14149 939 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 TTF1Q15361 905 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-218ENST00000442625 KIF4BQ2VIQ3 1234 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 IFNL3Q8IZI9 196 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 FAN1Q9Y2M0 1017 aa16.05■□□□□ 0.16
MCF2L-218ENST00000442625 MYO1CO00159 1063 aa16.04■□□□□ 0.16
MCF2L-218ENST00000442625 ATP8B1O43520 1251 aa16.04■□□□□ 0.16
MCF2L-218ENST00000442625 CASP14P31944 242 aa16.04■□□□□ 0.16
MCF2L-218ENST00000442625 CCT6AP40227 531 aaKnown RBP16.04■□□□□ 0.16
MCF2L-218ENST00000442625 TRIM28Q13263 835 aaKnown RBP16.04■□□□□ 0.16
MCF2L-218ENST00000442625 BEND6Q5SZJ8 279 aaPredicted RBP16.04■□□□□ 0.16
MCF2L-218ENST00000442625 SRGAP1Q7Z6B7 1085 aa16.04■□□□□ 0.16
MCF2L-218ENST00000442625 SLC35F6Q8N357 371 aa16.04■□□□□ 0.16
MCF2L-218ENST00000442625 EPSTI1Q96J88 318 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms