RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 COL18A1P39060 1754 aa23.03■■□□□ 1.28
SHOX2-203ENST00000441443 CYB5R4Q7L1T6 521 aa23.03■■□□□ 1.28
SHOX2-203ENST00000441443 RASGRP2Q7LDG7 609 aa23.03■■□□□ 1.28
SHOX2-203ENST00000441443 ATP2B1P20020 1258 aa23.03■■□□□ 1.28
SHOX2-203ENST00000441443 PPM1EQ8WY54 764 aa23.03■■□□□ 1.28
SHOX2-203ENST00000441443 GDAP1L1Q96MZ0 367 aa23.03■■□□□ 1.28
SHOX2-203ENST00000441443 SARSP49591 514 aaKnown RBP23.02■■□□□ 1.28
SHOX2-203ENST00000441443 MSL3Q8N5Y2 521 aaKnown RBP23.02■■□□□ 1.28
SHOX2-203ENST00000441443 NAPGQ99747 312 aaPredicted RBP23.02■■□□□ 1.28
SHOX2-203ENST00000441443 ANGEL1Q9UNK9 670 aaKnown RBP23.02■■□□□ 1.28
SHOX2-203ENST00000441443 AKAP17AQ02040 695 aaKnown RBP23.02■■□□□ 1.28
SHOX2-203ENST00000441443 USP49Q70CQ1 688 aa23.02■■□□□ 1.28
SHOX2-203ENST00000441443 APTXQ7Z2E3 356 aaKnown RBP23.02■■□□□ 1.28
SHOX2-203ENST00000441443 RIN2Q8WYP3 895 aaPredicted RBP23.02■■□□□ 1.28
SHOX2-203ENST00000441443 BTG4Q9NY30 223 aa23.02■■□□□ 1.28
SHOX2-203ENST00000441443 NWD2Q9ULI1 1742 aa23.02■■□□□ 1.28
SHOX2-203ENST00000441443 BTBD18B2RXH4 712 aa23.01■■□□□ 1.27
SHOX2-203ENST00000441443 RANBP6O60518 1105 aaKnown RBP23.01■■□□□ 1.27
SHOX2-203ENST00000441443 COBLO75128 1261 aa23.01■■□□□ 1.27
SHOX2-203ENST00000441443 FXR1P51114 621 aaKnown RBP eCLIP23.01■■□□□ 1.27
SHOX2-203ENST00000441443 SART3Q15020 963 aaKnown RBP23.01■■□□□ 1.27
SHOX2-203ENST00000441443 CCDC57Q2TAC2 916 aa23.01■■□□□ 1.27
SHOX2-203ENST00000441443 PI16Q6UXB8 463 aa23.01■■□□□ 1.27
SHOX2-203ENST00000441443 GBP3Q9H0R5 595 aa23.01■■□□□ 1.27
SHOX2-203ENST00000441443 MFAP3LO75121 409 aa23.01■■□□□ 1.27
SHOX2-203ENST00000441443 IL15P40933 162 aaPredicted RBP23.01■■□□□ 1.27
SHOX2-203ENST00000441443 IARSP41252 1262 aaKnown RBP23.01■■□□□ 1.27
SHOX2-203ENST00000441443 CARD10Q9BWT7 1032 aa23.01■■□□□ 1.27
SHOX2-203ENST00000441443 CASP1P29466 404 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 ADORA1P30542 326 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 PLCD1P51178 756 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 SCARF1Q14162 830 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 APOA5Q6Q788 366 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 NAA15Q9BXJ9 866 aaKnown RBP23■■□□□ 1.27
SHOX2-203ENST00000441443 YY1AP1Q9H869 796 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 CDKL5O76039 1030 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 GUCY2CP25092 1073 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 NT5DC1Q5TFE4 455 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 NBPF3Q9H094 633 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 ADAMTS7Q9UKP4 1686 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 EYA2O00167 538 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 SYF2O95926 243 aaKnown RBP23■■□□□ 1.27
SHOX2-203ENST00000441443 TOB1P50616 345 aaPredicted RBP23■■□□□ 1.27
SHOX2-203ENST00000441443 PIP4K2BP78356 416 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 CPLX2Q6PUV4 134 aaKnown RBP23■■□□□ 1.27
SHOX2-203ENST00000441443 SMYD4Q8IYR2 804 aaPredicted RBP23■■□□□ 1.27
SHOX2-203ENST00000441443 SLC26A6Q9BXS9 759 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 MED4Q9NPJ6 270 aa23■■□□□ 1.27
SHOX2-203ENST00000441443 GPAA1O43292 621 aa22.99■■□□□ 1.27
SHOX2-203ENST00000441443 E2F4Q16254 413 aa22.99■■□□□ 1.27
SHOX2-203ENST00000441443 NFXL1Q6ZNB6 911 aa22.99■■□□□ 1.27
SHOX2-203ENST00000441443 AFAP1L1Q8TED9 768 aa22.99■■□□□ 1.27
SHOX2-203ENST00000441443 CEP126Q9P2H0 1117 aa22.99■■□□□ 1.27
SHOX2-203ENST00000441443 KCNJ14Q9UNX9 436 aa22.99■■□□□ 1.27
SHOX2-203ENST00000441443 AFDNP55196 1824 aaKnown RBP22.99■■□□□ 1.27
SHOX2-203ENST00000441443 UBN2Q6ZU65 1347 aa22.99■■□□□ 1.27
SHOX2-203ENST00000441443 LOC102724159A0A0B4J2E5 919 aa22.99■■□□□ 1.27
SHOX2-203ENST00000441443 PWP2Q15269 919 aaKnown RBP22.99■■□□□ 1.27
SHOX2-203ENST00000441443 TBC1D10CQ8IV04 446 aa22.99■■□□□ 1.27
SHOX2-203ENST00000441443 ACBD3Q9H3P7 528 aa22.99■■□□□ 1.27
SHOX2-203ENST00000441443 FBXO2Q9UK22 296 aaPredicted RBP22.99■■□□□ 1.27
SHOX2-203ENST00000441443 PPFIA4O75335 1185 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 GYPCP04921 128 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 CD44P16070 742 aaKnown RBP22.98■■□□□ 1.27
SHOX2-203ENST00000441443 CDC25AP30304 524 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 WHAMMP3Q1A5X7 153 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 PIGBQ92521 554 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 GPR108Q9NPR9 543 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 B4E1Z4 1266 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 AFMP43652 599 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 NOSTRINQ8IVI9 506 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 ADD3Q9UEY8 706 aaKnown RBP22.98■■□□□ 1.27
SHOX2-203ENST00000441443 MYO6Q9UM54 1294 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 CCT6AP40227 531 aaKnown RBP22.98■■□□□ 1.27
SHOX2-203ENST00000441443 ZAP70P43403 619 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 ERVK-24P63145 666 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 TUBB2AQ13885 445 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 PAXIP1Q6ZW49 1069 aaPredicted RBP22.98■■□□□ 1.27
SHOX2-203ENST00000441443 TUBB2BQ9BVA1 445 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 INCENPQ9NQS7 918 aa22.98■■□□□ 1.27
SHOX2-203ENST00000441443 SOS2Q07890 1332 aaPredicted RBP22.97■■□□□ 1.27
SHOX2-203ENST00000441443 COL5A2P05997 1499 aaPredicted RBP22.97■■□□□ 1.27
SHOX2-203ENST00000441443 SH2B2O14492 632 aaPredicted RBP22.97■■□□□ 1.27
SHOX2-203ENST00000441443 NTRK3Q16288 839 aa22.97■■□□□ 1.27
SHOX2-203ENST00000441443 MICALL1Q8N3F8 863 aa22.97■■□□□ 1.27
SHOX2-203ENST00000441443 SLF1Q9BQI6 1058 aa22.97■■□□□ 1.27
SHOX2-203ENST00000441443 TTF2Q9UNY4 1162 aaKnown RBP22.97■■□□□ 1.27
SHOX2-203ENST00000441443 ZMYND10O75800 440 aa22.97■■□□□ 1.27
SHOX2-203ENST00000441443 GUCY1A2P33402 732 aa22.97■■□□□ 1.27
SHOX2-203ENST00000441443 CCDC82Q8N4S0 544 aa22.97■■□□□ 1.27
SHOX2-203ENST00000441443 TRIM10Q9UDY6 481 aa22.97■■□□□ 1.27
SHOX2-203ENST00000441443 PCDHB6Q9Y5E3 794 aa22.97■■□□□ 1.27
SHOX2-203ENST00000441443 GOLGA8AA7E2F4 631 aa22.96■■□□□ 1.27
SHOX2-203ENST00000441443 ENC1O14682 589 aa22.96■■□□□ 1.27
SHOX2-203ENST00000441443 ZBTB43O43298 467 aa22.96■■□□□ 1.27
SHOX2-203ENST00000441443 APPP05067 770 aa22.96■■□□□ 1.27
SHOX2-203ENST00000441443 PTPREP23469 700 aa22.96■■□□□ 1.27
SHOX2-203ENST00000441443 PBX1P40424 430 aa22.96■■□□□ 1.27
SHOX2-203ENST00000441443 KIF6Q6ZMV9 814 aa22.96■■□□□ 1.27
SHOX2-203ENST00000441443 APPBP2Q92624 585 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms