RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 RAB11FIP4Q86YS3 637 aa32.78■■■□□ 2.84
CGREF1-207ENST00000440612 GPC2Q8N158 579 aa32.78■■■□□ 2.84
CGREF1-207ENST00000440612 ZNF287Q9HBT7 754 aa32.78■■■□□ 2.84
CGREF1-207ENST00000440612 METTL16Q86W50 562 aaKnown RBP32.78■■■□□ 2.84
CGREF1-207ENST00000440612 TMTC2Q8N394 836 aa32.78■■■□□ 2.84
CGREF1-207ENST00000440612 RNF181Q9P0P0 153 aa32.78■■■□□ 2.84
CGREF1-207ENST00000440612 SMC3Q9UQE7 1217 aa32.78■■■□□ 2.84
CGREF1-207ENST00000440612 ERICH2A1L162 156 aa32.77■■■□□ 2.84
CGREF1-207ENST00000440612 HLA-DOAP06340 250 aa32.77■■■□□ 2.84
CGREF1-207ENST00000440612 SHMT1P34896 483 aa32.77■■■□□ 2.84
CGREF1-207ENST00000440612 ZNF444Q8N0Y2 327 aaPredicted RBP32.77■■■□□ 2.84
CGREF1-207ENST00000440612 SMARCC2Q8TAQ2 1214 aa32.77■■■□□ 2.84
CGREF1-207ENST00000440612 TCP11L1Q9NUJ3 509 aa32.77■■■□□ 2.84
CGREF1-207ENST00000440612 NAP1L2Q9ULW6 460 aaPredicted RBP32.77■■■□□ 2.84
CGREF1-207ENST00000440612 NID2Q14112 1375 aa32.76■■■□□ 2.84
CGREF1-207ENST00000440612 TCP10L2B9ZVM9 353 aa32.76■■■□□ 2.84
CGREF1-207ENST00000440612 JAK2O60674 1132 aa32.76■■■□□ 2.84
CGREF1-207ENST00000440612 GJB2P29033 226 aa32.76■■■□□ 2.84
CGREF1-207ENST00000440612 NSUN7Q8NE18 718 aaKnown RBP32.76■■■□□ 2.84
CGREF1-207ENST00000440612 LLPHQ9BRT6 129 aaKnown RBP32.76■■■□□ 2.84
CGREF1-207ENST00000440612 FAM217BQ9NTX9 383 aaPredicted RBP32.76■■■□□ 2.84
CGREF1-207ENST00000440612 TMOD2Q9NZR1 351 aa32.76■■■□□ 2.84
CGREF1-207ENST00000440612 PI4KBQ9UBF8 816 aa32.76■■■□□ 2.84
CGREF1-207ENST00000440612 SWAP70Q9UH65 585 aa32.76■■■□□ 2.84
CGREF1-207ENST00000440612 ZDHHC9Q9Y397 364 aa32.76■■■□□ 2.84
CGREF1-207ENST00000440612 NFXL1Q6ZNB6 911 aa32.75■■■□□ 2.83
CGREF1-207ENST00000440612 SAMD7Q7Z3H4 446 aa32.75■■■□□ 2.83
CGREF1-207ENST00000440612 MYL10Q9BUA6 226 aa32.75■■■□□ 2.83
CGREF1-207ENST00000440612 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.75■■■□□ 2.83
CGREF1-207ENST00000440612 CCDC69A6NI79 296 aa32.75■■■□□ 2.83
CGREF1-207ENST00000440612 RAB3GAP1Q15042 981 aa32.75■■■□□ 2.83
CGREF1-207ENST00000440612 C9orf131Q5VYM1 1079 aa32.75■■■□□ 2.83
CGREF1-207ENST00000440612 NEDD1Q8NHV4 660 aa32.75■■■□□ 2.83
CGREF1-207ENST00000440612 FAM151AQ8WW52 585 aa32.75■■■□□ 2.83
CGREF1-207ENST00000440612 ANKS1AQ92625 1134 aa32.75■■■□□ 2.83
CGREF1-207ENST00000440612 SLC12A7Q9Y666 1083 aa32.75■■■□□ 2.83
CGREF1-207ENST00000440612 ZBTB43O43298 467 aa32.74■■■□□ 2.83
CGREF1-207ENST00000440612 RXRAP19793 462 aa32.74■■■□□ 2.83
CGREF1-207ENST00000440612 PGAP2Q9UHJ9 254 aa32.74■■■□□ 2.83
CGREF1-207ENST00000440612 TSPY3P0CV98 308 aa32.73■■■□□ 2.83
CGREF1-207ENST00000440612 TSPY8P0CW00 308 aa32.73■■■□□ 2.83
CGREF1-207ENST00000440612 GPRC5DQ9NZD1 345 aa32.73■■■□□ 2.83
CGREF1-207ENST00000440612 PLIN4Q96Q06 1357 aa32.73■■■□□ 2.83
CGREF1-207ENST00000440612 CDC27P30260 824 aa32.72■■■□□ 2.83
CGREF1-207ENST00000440612 IFIT1BQ5T764 474 aaKnown RBP32.72■■■□□ 2.83
CGREF1-207ENST00000440612 RBM26Q5T8P6 1007 aaKnown RBP32.72■■■□□ 2.83
CGREF1-207ENST00000440612 FAM83AQ86UY5 434 aa32.72■■■□□ 2.83
CGREF1-207ENST00000440612 MICU3Q86XE3 530 aa32.72■■■□□ 2.83
CGREF1-207ENST00000440612 ZNF654Q8IZM8 581 aa32.72■■■□□ 2.83
CGREF1-207ENST00000440612 NOVP48745 357 aa32.72■■■□□ 2.83
CGREF1-207ENST00000440612 METAP2P50579 478 aaKnown RBP eCLIP32.72■■■□□ 2.83
CGREF1-207ENST00000440612 RCAN1P53805 252 aa32.72■■■□□ 2.83
CGREF1-207ENST00000440612 TBC1D10BQ4KMP7 808 aaPredicted RBP32.72■■■□□ 2.83
CGREF1-207ENST00000440612 DGKHQ86XP1 1220 aa32.72■■■□□ 2.83
CGREF1-207ENST00000440612 ZSCAN29Q8IWY8 852 aaPredicted RBP32.72■■■□□ 2.83
CGREF1-207ENST00000440612 VEZTQ9HBM0 779 aa32.72■■■□□ 2.83
CGREF1-207ENST00000440612 TAOK2Q9UL54 1235 aa32.72■■■□□ 2.83
CGREF1-207ENST00000440612 MYO1BO43795 1136 aa32.71■■■□□ 2.83
CGREF1-207ENST00000440612 ADD1P35611 737 aaKnown RBP32.71■■■□□ 2.83
CGREF1-207ENST00000440612 FOXP4Q8IVH2 680 aaPredicted RBP32.71■■■□□ 2.83
CGREF1-207ENST00000440612 ASTN2O75129 1339 aaPredicted RBP32.7■■■□□ 2.83
CGREF1-207ENST00000440612 FAM196BA6NMK8 535 aa32.7■■■□□ 2.83
CGREF1-207ENST00000440612 AKR1B1P15121 316 aa32.7■■■□□ 2.83
CGREF1-207ENST00000440612 NUCB2P80303 420 aa32.7■■■□□ 2.83
CGREF1-207ENST00000440612 TROAPQ12815 778 aa32.7■■■□□ 2.83
CGREF1-207ENST00000440612 IGKV6D-41A0A0C4DH26 115 aa32.69■■■□□ 2.82
CGREF1-207ENST00000440612 GPR162Q16538 588 aa32.69■■■□□ 2.82
CGREF1-207ENST00000440612 KIF4BQ2VIQ3 1234 aa32.69■■■□□ 2.82
CGREF1-207ENST00000440612 TATDN1Q6P1N9 297 aa32.69■■■□□ 2.82
CGREF1-207ENST00000440612 CDAN1Q8IWY9 1227 aa32.69■■■□□ 2.82
CGREF1-207ENST00000440612 PTPDC1A2A3K4 754 aa32.69■■■□□ 2.82
CGREF1-207ENST00000440612 DDNO94850 711 aaPredicted RBP32.69■■■□□ 2.82
CGREF1-207ENST00000440612 SYT1P21579 422 aa32.69■■■□□ 2.82
CGREF1-207ENST00000440612 NTRK3Q16288 839 aa32.69■■■□□ 2.82
CGREF1-207ENST00000440612 CCDC144CPQ8IYA2 1237 aa32.69■■■□□ 2.82
CGREF1-207ENST00000440612 TMEM39BQ9GZU3 492 aa32.69■■■□□ 2.82
CGREF1-207ENST00000440612 GOLGA8AA7E2F4 631 aa32.68■■■□□ 2.82
CGREF1-207ENST00000440612 BRD1O95696 1058 aa32.68■■■□□ 2.82
CGREF1-207ENST00000440612 FDPSP14324 419 aaKnown RBP32.68■■■□□ 2.82
CGREF1-207ENST00000440612 CSRNP1Q96S65 589 aa32.68■■■□□ 2.82
CGREF1-207ENST00000440612 CCDC178Q5BJE1 867 aa32.67■■■□□ 2.82
CGREF1-207ENST00000440612 TRPM4Q8TD43 1214 aa32.67■■■□□ 2.82
CGREF1-207ENST00000440612 CHMP4CQ96CF2 233 aa32.67■■■□□ 2.82
CGREF1-207ENST00000440612 GREB1LQ9C091 1923 aaPredicted RBP32.67■■■□□ 2.82
CGREF1-207ENST00000440612 H7C1D1 291 aa32.66■■■□□ 2.82
CGREF1-207ENST00000440612 DHX16O60231 1041 aaKnown RBP32.66■■■□□ 2.82
CGREF1-207ENST00000440612 EPS15P42566 896 aa32.66■■■□□ 2.82
CGREF1-207ENST00000440612 SYNE3Q6ZMZ3 975 aa32.66■■■□□ 2.82
CGREF1-207ENST00000440612 CRACR2BQ8N4Y2 399 aaPredicted RBP32.66■■■□□ 2.82
CGREF1-207ENST00000440612 TNPO1Q92973 898 aaKnown RBP32.66■■■□□ 2.82
CGREF1-207ENST00000440612 CEP95Q96GE4 821 aa32.66■■■□□ 2.82
CGREF1-207ENST00000440612 FANCBQ8NB91 859 aa32.66■■■□□ 2.82
CGREF1-207ENST00000440612 DDX11Q96FC9 970 aa32.66■■■□□ 2.82
CGREF1-207ENST00000440612 PPFIA3O75145 1194 aa32.65■■■□□ 2.82
CGREF1-207ENST00000440612 SCAF8Q9UPN6 1271 aaKnown RBP32.65■■■□□ 2.82
CGREF1-207ENST00000440612 DDAH1O94760 285 aa32.64■■■□□ 2.82
CGREF1-207ENST00000440612 HIRAP54198 1017 aaPredicted RBP32.64■■■□□ 2.82
CGREF1-207ENST00000440612 CATIPQ7Z7H3 387 aa32.64■■■□□ 2.82
CGREF1-207ENST00000440612 TMEM47Q9BQJ4 181 aa32.64■■■□□ 2.82
CGREF1-207ENST00000440612 HMGN5P82970 282 aaKnown RBP32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms