RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TATDN1Q6P1N9 297 aa21.62■■□□□ 1.05
CPSF4-205ENST00000440514 CTR9Q6PD62 1173 aa21.62■■□□□ 1.05
CPSF4-205ENST00000440514 DYNLL2Q96FJ2 89 aa21.62■■□□□ 1.05
CPSF4-205ENST00000440514 ARPP21Q9UBL0 812 aaPredicted RBP21.62■■□□□ 1.05
CPSF4-205ENST00000440514 ZBTB21Q9ULJ3 1066 aa21.62■■□□□ 1.05
CPSF4-205ENST00000440514 APPP05067 770 aa21.61■■□□□ 1.05
CPSF4-205ENST00000440514 CETPP11597 493 aa21.61■■□□□ 1.05
CPSF4-205ENST00000440514 SDSP20132 328 aa21.61■■□□□ 1.05
CPSF4-205ENST00000440514 TDO2P48775 406 aa21.61■■□□□ 1.05
CPSF4-205ENST00000440514 AMOTL1Q8IY63 956 aa21.61■■□□□ 1.05
CPSF4-205ENST00000440514 HELLSQ9NRZ9 838 aa21.61■■□□□ 1.05
CPSF4-205ENST00000440514 AFG3L2Q9Y4W6 797 aa21.61■■□□□ 1.05
CPSF4-205ENST00000440514 TRIM75PA6NK02 468 aa21.6■■□□□ 1.05
CPSF4-205ENST00000440514 FOXP2O15409 715 aa21.6■■□□□ 1.05
CPSF4-205ENST00000440514 TBC1D8O95759 1140 aa21.6■■□□□ 1.05
CPSF4-205ENST00000440514 FAM43AQ8N2R8 423 aa21.6■■□□□ 1.05
CPSF4-205ENST00000440514 LOC285556D6RIA3 1793 aa21.59■■□□□ 1.05
CPSF4-205ENST00000440514 GH2P01242 217 aa21.59■■□□□ 1.05
CPSF4-205ENST00000440514 ASNSP08243 561 aa21.59■■□□□ 1.05
CPSF4-205ENST00000440514 CERKLQ49MI3 558 aaPredicted RBP21.59■■□□□ 1.05
CPSF4-205ENST00000440514 VPS53Q5VIR6 699 aa21.59■■□□□ 1.05
CPSF4-205ENST00000440514 GIMAP6Q6P9H5 292 aa21.59■■□□□ 1.05
CPSF4-205ENST00000440514 ZNF589Q86UQ0 364 aaPredicted RBP21.59■■□□□ 1.05
CPSF4-205ENST00000440514 TICAM2Q86XR7 235 aa21.59■■□□□ 1.05
CPSF4-205ENST00000440514 IFNL3Q8IZI9 196 aa21.59■■□□□ 1.05
CPSF4-205ENST00000440514 USP17L5A8MUK1 530 aa21.58■■□□□ 1.05
CPSF4-205ENST00000440514 PATL2C9JE40 543 aaKnown RBP21.58■■□□□ 1.05
CPSF4-205ENST00000440514 BTBD19C9JJ37 291 aa21.58■■□□□ 1.05
CPSF4-205ENST00000440514 CXCL11O14625 94 aa21.58■■□□□ 1.05
CPSF4-205ENST00000440514 MOGSQ13724 837 aa21.58■■□□□ 1.05
CPSF4-205ENST00000440514 MCMDC2Q4G0Z9 681 aa21.58■■□□□ 1.05
CPSF4-205ENST00000440514 SBK1Q52WX2 424 aa21.58■■□□□ 1.05
CPSF4-205ENST00000440514 R3HDMLQ9H3Y0 253 aa21.58■■□□□ 1.05
CPSF4-205ENST00000440514 DIAPH3Q9NSV4 1193 aa21.58■■□□□ 1.05
CPSF4-205ENST00000440514 SWAP70Q9UH65 585 aa21.58■■□□□ 1.05
CPSF4-205ENST00000440514 ROBO3Q96MS0 1386 aa21.58■■□□□ 1.04
CPSF4-205ENST00000440514 A0A0G2JLL6 359 aaPredicted RBP21.57■■□□□ 1.04
CPSF4-205ENST00000440514 MINDY4BA8MYZ0 360 aa21.57■■□□□ 1.04
CPSF4-205ENST00000440514 ALDH1A1P00352 501 aa21.57■■□□□ 1.04
CPSF4-205ENST00000440514 SPP2Q13103 211 aa21.57■■□□□ 1.04
CPSF4-205ENST00000440514 ABCB5Q2M3G0 1257 aa21.57■■□□□ 1.04
CPSF4-205ENST00000440514 ERICH6BQ5W0A0 696 aa21.57■■□□□ 1.04
CPSF4-205ENST00000440514 OTUD7BQ6GQQ9 843 aa21.57■■□□□ 1.04
CPSF4-205ENST00000440514 C16orf86Q6ZW13 317 aa21.57■■□□□ 1.04
CPSF4-205ENST00000440514 PRRT2Q7Z6L0 340 aaPredicted RBP21.57■■□□□ 1.04
CPSF4-205ENST00000440514 STK11IPQ8N1F8 1099 aa21.57■■□□□ 1.04
CPSF4-205ENST00000440514 ZNF280CQ8ND82 737 aa21.57■■□□□ 1.04
CPSF4-205ENST00000440514 NACAP1Q9BZK3 213 aa21.57■■□□□ 1.04
CPSF4-205ENST00000440514 CCDC171Q6TFL3 1326 aa21.56■■□□□ 1.04
CPSF4-205ENST00000440514 CDK8P49336 464 aa21.56■■□□□ 1.04
CPSF4-205ENST00000440514 DGKZQ13574 1117 aa21.56■■□□□ 1.04
CPSF4-205ENST00000440514 CWC27Q6UX04 472 aaKnown RBP21.56■■□□□ 1.04
CPSF4-205ENST00000440514 GADL1Q6ZQY3 521 aa21.56■■□□□ 1.04
CPSF4-205ENST00000440514 NAPBQ9H115 298 aa21.56■■□□□ 1.04
CPSF4-205ENST00000440514 AS3MTQ9HBK9 375 aa21.56■■□□□ 1.04
CPSF4-205ENST00000440514 PRDM10Q9NQV6 1147 aa21.56■■□□□ 1.04
CPSF4-205ENST00000440514 GINM1Q9NU53 330 aa21.56■■□□□ 1.04
CPSF4-205ENST00000440514 CRHR2Q13324 411 aa21.55■■□□□ 1.04
CPSF4-205ENST00000440514 RAB3GAP1Q15042 981 aa21.55■■□□□ 1.04
CPSF4-205ENST00000440514 TAF1CQ15572 869 aaPredicted RBP21.55■■□□□ 1.04
CPSF4-205ENST00000440514 CFHR5Q9BXR6 569 aa21.55■■□□□ 1.04
CPSF4-205ENST00000440514 TBC1D2Q9BYX2 928 aa21.55■■□□□ 1.04
CPSF4-205ENST00000440514 CASP8AP2Q9UKL3 1982 aa21.54■■□□□ 1.04
CPSF4-205ENST00000440514 HIP1O00291 1037 aa21.54■■□□□ 1.04
CPSF4-205ENST00000440514 MPHOSPH10O00566 681 aaKnown RBP21.54■■□□□ 1.04
CPSF4-205ENST00000440514 AKR1B1P15121 316 aa21.54■■□□□ 1.04
CPSF4-205ENST00000440514 GUCY1A2P33402 732 aa21.54■■□□□ 1.04
CPSF4-205ENST00000440514 HMGCS2P54868 508 aa21.54■■□□□ 1.04
CPSF4-205ENST00000440514 MTMR2Q13614 643 aa21.54■■□□□ 1.04
CPSF4-205ENST00000440514 COL13A1Q5TAT6 717 aaPredicted RBP21.54■■□□□ 1.04
CPSF4-205ENST00000440514 ANKRD23Q86SG2 305 aa21.54■■□□□ 1.04
CPSF4-205ENST00000440514 WDR18Q9BV38 432 aa21.54■■□□□ 1.04
CPSF4-205ENST00000440514 CABP5Q9NP86 173 aa21.54■■□□□ 1.04
CPSF4-205ENST00000440514 SEPT2Q15019 361 aa21.53■■□□□ 1.04
CPSF4-205ENST00000440514 GPAT2Q6NUI2 795 aa21.53■■□□□ 1.04
CPSF4-205ENST00000440514 TAOK2Q9UL54 1235 aa21.53■■□□□ 1.04
CPSF4-205ENST00000440514 PDHXO00330 501 aa21.52■■□□□ 1.04
CPSF4-205ENST00000440514 PPARAQ07869 468 aa21.52■■□□□ 1.04
CPSF4-205ENST00000440514 FASTKD5Q7L8L6 764 aaKnown RBP21.52■■□□□ 1.04
CPSF4-205ENST00000440514 CLEC10AQ8IUN9 316 aa21.52■■□□□ 1.04
CPSF4-205ENST00000440514 IL25Q9H293 177 aa21.52■■□□□ 1.04
CPSF4-205ENST00000440514 GREB1LQ9C091 1923 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-205ENST00000440514 GPR25O00155 361 aa21.51■■□□□ 1.03
CPSF4-205ENST00000440514 HSPD1P10809 573 aaKnown RBP21.51■■□□□ 1.03
CPSF4-205ENST00000440514 TREML2Q5T2D2 321 aa21.51■■□□□ 1.03
CPSF4-205ENST00000440514 ZCCHC17Q9NP64 241 aaKnown RBP21.51■■□□□ 1.03
CPSF4-205ENST00000440514 PPP4R2Q9NY27 417 aa21.51■■□□□ 1.03
CPSF4-205ENST00000440514 LAMA4Q16363 1823 aa21.5■■□□□ 1.03
CPSF4-205ENST00000440514 PRDM1O75626 825 aa21.5■■□□□ 1.03
CPSF4-205ENST00000440514 RASA1P20936 1047 aa21.5■■□□□ 1.03
CPSF4-205ENST00000440514 MFAP1P55081 439 aaKnown RBP21.5■■□□□ 1.03
CPSF4-205ENST00000440514 BACE1P56817 501 aa21.5■■□□□ 1.03
CPSF4-205ENST00000440514 ZYXQ15942 572 aaKnown RBP21.5■■□□□ 1.03
CPSF4-205ENST00000440514 SH3D19Q5HYK7 790 aa21.5■■□□□ 1.03
CPSF4-205ENST00000440514 TMEM179Q6ZVK1 233 aa21.5■■□□□ 1.03
CPSF4-205ENST00000440514 ACER1Q8TDN7 264 aa21.5■■□□□ 1.03
CPSF4-205ENST00000440514 ZNF296Q8WUU4 475 aaPredicted RBP21.5■■□□□ 1.03
CPSF4-205ENST00000440514 ZFYVE28Q9HCC9 887 aa21.5■■□□□ 1.03
CPSF4-205ENST00000440514 AGTPBP1Q9UPW5 1226 aa21.5■■□□□ 1.03
CPSF4-205ENST00000440514 USP17L10C9JJH3 530 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms