RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 MTMR6Q9Y217 621 aa13.42□□□□□ -0.26
SMPD4P2-201ENST00000440167 LTBP3Q9NS15 1303 aa13.42□□□□□ -0.26
SMPD4P2-201ENST00000440167 GREB1LQ9C091 1923 aaPredicted RBP13.42□□□□□ -0.26
SMPD4P2-201ENST00000440167 CPLX1O14810 134 aa13.42□□□□□ -0.26
SMPD4P2-201ENST00000440167 IFIT1BQ5T764 474 aaKnown RBP13.42□□□□□ -0.26
SMPD4P2-201ENST00000440167 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
SMPD4P2-201ENST00000440167 ZNF654Q8IZM8 581 aa13.42□□□□□ -0.26
SMPD4P2-201ENST00000440167 FAM184AQ8NB25 1140 aa13.42□□□□□ -0.26
SMPD4P2-201ENST00000440167 FAM198AQ9UFP1 575 aa13.42□□□□□ -0.26
SMPD4P2-201ENST00000440167 HDAC9Q9UKV0 1011 aa13.42□□□□□ -0.26
SMPD4P2-201ENST00000440167 SHTN1A0MZ66 631 aa13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 F13A1P00488 732 aa13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 TSPY3P0CV98 308 aa13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 TSPY8P0CW00 308 aa13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 SLURP2P0DP57 97 aa13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 FDPSP14324 419 aaKnown RBP13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 CDC37L1Q7L3B6 337 aa13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 TTC6Q86TZ1 520 aa13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 ZNF444Q8N0Y2 327 aaPredicted RBP13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 NUP133Q8WUM0 1156 aa13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 FAM217BQ9NTX9 383 aaPredicted RBP13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 NID2Q14112 1375 aa13.41□□□□□ -0.26
SMPD4P2-201ENST00000440167 DHX16O60231 1041 aaKnown RBP13.4□□□□□ -0.26
SMPD4P2-201ENST00000440167 PDCP20941 246 aa13.4□□□□□ -0.26
SMPD4P2-201ENST00000440167 HMGN5P82970 282 aaKnown RBP13.4□□□□□ -0.26
SMPD4P2-201ENST00000440167 MCTP1Q6DN14 999 aa13.4□□□□□ -0.26
SMPD4P2-201ENST00000440167 AGBL3Q8NEM8 1001 aa13.4□□□□□ -0.26
SMPD4P2-201ENST00000440167 IDI2Q9BXS1 227 aa13.4□□□□□ -0.26
SMPD4P2-201ENST00000440167 IL17RBQ9NRM6 502 aa13.4□□□□□ -0.26
SMPD4P2-201ENST00000440167 CLRN2A0PK11 232 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 DDTLA6NHG4 134 aaPredicted RBP13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 GABPAQ06546 454 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 DLGAP5Q15398 846 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 RTN1Q16799 776 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 CLEC17AQ6ZS10 378 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 SH3BP5LQ7L8J4 393 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 OGFOD1Q8N543 542 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 PHKBQ93100 1093 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 ZNF287Q9HBT7 754 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 BAZ2BQ9UIF8 2168 aaKnown RBP13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 HLA-DOAP06340 250 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 TNIP1Q15025 636 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 NTRK3Q16288 839 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 RCSD1Q6JBY9 416 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 ARHGAP27Q6ZUM4 889 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 CATIPQ7Z7H3 387 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 FERMT3Q86UX7 667 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 CMTR1Q8N1G2 835 aaKnown RBP13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 ORC3Q9UBD5 711 aaPredicted RBP13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
SMPD4P2-201ENST00000440167 ZNF541Q9H0D2 1346 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 DDX11L8A8MPP1 907 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 TCP10L2B9ZVM9 353 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 H3BQV1 296 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 GUCY1B3Q02153 619 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 IFFO2Q5TF58 517 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 FANCBQ8NB91 859 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 SYT17Q9BSW7 474 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 ZNF70Q9UC06 446 aaPredicted RBP13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 SERPINB13Q9UIV8 391 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 GJA3Q9Y6H8 435 aa13.38□□□□□ -0.27
SMPD4P2-201ENST00000440167 FZD9O00144 591 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 CDKL5O76039 1030 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 AKR1B1P15121 316 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 SHMT1P34896 483 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 EIF6P56537 245 aaKnown RBP13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 CCDC82Q8N4S0 544 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 NEDD1Q8NHV4 660 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 AIFM3Q96NN9 605 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 DNAJC18Q9H819 358 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 KAT14Q9H8E8 782 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 VEZTQ9HBM0 779 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 TCP11L1Q9NUJ3 509 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 TMOD2Q9NZR1 351 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 SWAP70Q9UH65 585 aa13.37□□□□□ -0.27
SMPD4P2-201ENST00000440167 ATAD5Q96QE3 1844 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 UBE2Q2LH0YL09 131 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 NT5C2P49902 561 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 GMPSP49915 693 aaPredicted RBP13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 RCAN1P53805 252 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 TROAPQ12815 778 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 OTUD7BQ6GQQ9 843 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 SLC26A6Q9BXS9 759 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 EHD4Q9H223 541 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 DHX36Q9H2U1 1008 aaKnown RBP13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 MYOZ2Q9NPC6 264 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 GJB4Q9NTQ9 266 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 STX8Q9UNK0 236 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 KIF3AQ9Y496 699 aa13.36□□□□□ -0.27
SMPD4P2-201ENST00000440167 COL2A1P02458 1487 aaPredicted RBP13.35□□□□□ -0.27
SMPD4P2-201ENST00000440167 ENTPD3O75355 529 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms