RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 POLR3DP05423 398 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-204ENST00000440083 MAP3K10Q02779 954 aa17.21■□□□□ 0.35
TNFRSF1A-204ENST00000440083 NFKBIBQ15653 356 aa17.21■□□□□ 0.35
TNFRSF1A-204ENST00000440083 SHROOM1Q2M3G4 852 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-204ENST00000440083 NOL8Q76FK4 1167 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1A-204ENST00000440083 WNK4Q96J92 1243 aa17.21■□□□□ 0.35
TNFRSF1A-204ENST00000440083 DSCC1Q9BVC3 393 aa17.21■□□□□ 0.35
TNFRSF1A-204ENST00000440083 PI4KBQ9UBF8 816 aa17.21■□□□□ 0.35
TNFRSF1A-204ENST00000440083 CYP46A1Q9Y6A2 500 aa17.21■□□□□ 0.35
TNFRSF1A-204ENST00000440083 FOXP2O15409 715 aa17.2■□□□□ 0.34
TNFRSF1A-204ENST00000440083 HLA-DOAP06340 250 aa17.2■□□□□ 0.34
TNFRSF1A-204ENST00000440083 CCDC84Q86UT8 332 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-204ENST00000440083 CRACR2BQ8N4Y2 399 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-204ENST00000440083 CCDC102AQ96A19 550 aa17.2■□□□□ 0.34
TNFRSF1A-204ENST00000440083 ATP8A2Q9NTI2 1148 aa17.2■□□□□ 0.34
TNFRSF1A-204ENST00000440083 CSADQ9Y600 493 aa17.2■□□□□ 0.34
TNFRSF1A-204ENST00000440083 DOCK1Q14185 1865 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 TBC1D12O60347 775 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 JAG1P78504 1218 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 KIF23Q02241 960 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 VPS53Q5VIR6 699 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 SPRYD7Q5W111 196 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 BLOC1S2Q6QNY1 142 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 METTL16Q86W50 562 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 JMYQ8N9B5 988 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 SLC44A5Q8NCS7 719 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 OPTNQ96CV9 577 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 DYNLL2Q96FJ2 89 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 OTUD5Q96G74 571 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 TMX3Q96JJ7 454 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 CWC22Q9HCG8 908 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 PDRG1Q9NUG6 133 aa17.19■□□□□ 0.34
TNFRSF1A-204ENST00000440083 USP17L12C9JPN9 530 aa17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 USP17L21D6R901 530 aa17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 GDF11O95390 407 aa17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 APPP05067 770 aa17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 DDIT3P35638 169 aa17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 NOL9Q5SY16 702 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 CTR9Q6PD62 1173 aa17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 TRIM34Q9BYJ4 488 aa17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 ZSWIM6Q9HCJ5 1215 aa17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 HERC5Q9UII4 1024 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 ATAD5Q96QE3 1844 aa17.18■□□□□ 0.34
TNFRSF1A-204ENST00000440083 SPDYE5A6NIY4 337 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 TDO2P48775 406 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 AK2P54819 239 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 NOGQ13253 232 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 RUFY3Q7L099 469 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 TTC6Q86TZ1 520 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 FOXP4Q8IVH2 680 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 TTC14Q96N46 770 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 EHD4Q9H223 541 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 CTNNA3Q9UI47 895 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 SERPINB13Q9UIV8 391 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 LAMB1P07942 1786 aa17.17■□□□□ 0.34
TNFRSF1A-204ENST00000440083 UNCXA6NJT0 531 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 PATL2C9JE40 543 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 GNAT2P19087 354 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 SHMT1P34896 483 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 GABPAQ06546 454 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 ANKRD1Q15327 319 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 ADCK5Q3MIX3 580 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 C12orf60Q5U649 245 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 SCYL3Q8IZE3 742 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 IFNL3Q8IZI9 196 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 LIMCH1Q9UPQ0 1083 aa17.16■□□□□ 0.34
TNFRSF1A-204ENST00000440083 MINDY4BA8MYZ0 360 aa17.15■□□□□ 0.34
TNFRSF1A-204ENST00000440083 CTNND1O60716 968 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-204ENST00000440083 HSPD1P10809 573 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-204ENST00000440083 NUCB2P80303 420 aa17.15■□□□□ 0.34
TNFRSF1A-204ENST00000440083 CUL4AQ13619 759 aa17.15■□□□□ 0.34
TNFRSF1A-204ENST00000440083 ERO1BQ86YB8 467 aa17.15■□□□□ 0.34
TNFRSF1A-204ENST00000440083 INTS4Q96HW7 963 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-204ENST00000440083 ZSCAN31Q96LW9 406 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-204ENST00000440083 PICK1Q9NRD5 415 aa17.15■□□□□ 0.34
TNFRSF1A-204ENST00000440083 PHIPQ8WWQ0 1821 aa17.14■□□□□ 0.34
TNFRSF1A-204ENST00000440083 CPA1P15085 419 aa17.14■□□□□ 0.33
TNFRSF1A-204ENST00000440083 PTPRAP18433 802 aa17.14■□□□□ 0.33
TNFRSF1A-204ENST00000440083 RPS6KB1P23443 525 aa17.14■□□□□ 0.33
TNFRSF1A-204ENST00000440083 MAP2K2P36507 400 aa17.14■□□□□ 0.33
TNFRSF1A-204ENST00000440083 CAP2P40123 477 aa17.14■□□□□ 0.33
TNFRSF1A-204ENST00000440083 GIMAP6Q6P9H5 292 aa17.14■□□□□ 0.33
TNFRSF1A-204ENST00000440083 GBP4Q96PP9 640 aa17.14■□□□□ 0.33
TNFRSF1A-204ENST00000440083 SH2B1Q9NRF2 756 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1A-204ENST00000440083 ARPP21Q9UBL0 812 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1A-204ENST00000440083 PCNTO95613 3336 aa17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 IRF6O14896 467 aa17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 HMGB1P09429 215 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 ZBTB48P10074 688 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 PPIL2Q13356 520 aa17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 RAB3GAP1Q15042 981 aa17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 SBK1Q52WX2 424 aa17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 TATDN1Q6P1N9 297 aa17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 NEK1Q96PY6 1258 aa17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 NACAP1Q9BZK3 213 aa17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 NAPBQ9H115 298 aa17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 ZBTB21Q9ULJ3 1066 aa17.13■□□□□ 0.33
TNFRSF1A-204ENST00000440083 MYH8P13535 1937 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms