RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 TOMM22Q9NS69 142 aa8.84□□□□□ -0.99
UBR3-205ENST00000439681 AKR1B1P15121 316 aa8.83□□□□□ -1
UBR3-205ENST00000439681 MCM5P33992 734 aa8.83□□□□□ -1
UBR3-205ENST00000439681 NT5C2P49902 561 aa8.83□□□□□ -1
UBR3-205ENST00000439681 SHROOM1Q2M3G4 852 aaPredicted RBP8.83□□□□□ -1
UBR3-205ENST00000439681 SUPT20HL1Q3ZLR7 823 aa8.83□□□□□ -1
UBR3-205ENST00000439681 PIAS4Q8N2W9 510 aaPredicted RBP8.83□□□□□ -1
UBR3-205ENST00000439681 NEDD1Q8NHV4 660 aa8.83□□□□□ -1
UBR3-205ENST00000439681 IGDCC4Q8TDY8 1250 aa8.83□□□□□ -1
UBR3-205ENST00000439681 CDCA5Q96FF9 252 aa8.83□□□□□ -1
UBR3-205ENST00000439681 LRRC2Q9BYS8 371 aa8.83□□□□□ -1
UBR3-205ENST00000439681 IL17RBQ9NRM6 502 aa8.83□□□□□ -1
UBR3-205ENST00000439681 PDRG1Q9NUG6 133 aa8.83□□□□□ -1
UBR3-205ENST00000439681 DAXXQ9UER7 740 aaPredicted RBP8.83□□□□□ -1
UBR3-205ENST00000439681 ZNF112Q9UJU3 913 aa8.83□□□□□ -1
UBR3-205ENST00000439681 SCN4AP35499 1836 aa8.83□□□□□ -1
UBR3-205ENST00000439681 IGKV6D-41A0A0C4DH26 115 aa8.83□□□□□ -1
UBR3-205ENST00000439681 TRAF5O00463 557 aa8.83□□□□□ -1
UBR3-205ENST00000439681 KIF3CO14782 793 aa8.83□□□□□ -1
UBR3-205ENST00000439681 NMT2O60551 498 aa8.83□□□□□ -1
UBR3-205ENST00000439681 CD2BP2O95400 341 aaKnown RBP8.83□□□□□ -1
UBR3-205ENST00000439681 FMR1Q06787 632 aaKnown RBP eCLIP8.83□□□□□ -1
UBR3-205ENST00000439681 TOB2Q14106 344 aaPredicted RBP8.83□□□□□ -1
UBR3-205ENST00000439681 CERKLQ49MI3 558 aaPredicted RBP8.83□□□□□ -1
UBR3-205ENST00000439681 FBXL16Q8N461 479 aa8.83□□□□□ -1
UBR3-205ENST00000439681 CCDC17Q96LX7 622 aa8.83□□□□□ -1
UBR3-205ENST00000439681 ZKSCAN3Q9BRR0 538 aa8.83□□□□□ -1
UBR3-205ENST00000439681 TRIM34Q9BYJ4 488 aa8.83□□□□□ -1
UBR3-205ENST00000439681 AGXT2Q9BYV1 514 aa8.83□□□□□ -1
UBR3-205ENST00000439681 GPBP1L1Q9HC44 474 aaPredicted RBP8.83□□□□□ -1
UBR3-205ENST00000439681 TCP11L1Q9NUJ3 509 aa8.83□□□□□ -1
UBR3-205ENST00000439681 FZD1Q9UP38 647 aa8.83□□□□□ -1
UBR3-205ENST00000439681 WDR19Q8NEZ3 1342 aa8.83□□□□□ -1
UBR3-205ENST00000439681 SSC5DA1L4H1 1573 aa8.83□□□□□ -1
UBR3-205ENST00000439681 TSPY2A6NKD2 308 aa8.82□□□□□ -1
UBR3-205ENST00000439681 USP2O75604 605 aaPredicted RBP8.82□□□□□ -1
UBR3-205ENST00000439681 ITGBL1O95965 494 aaPredicted RBP8.82□□□□□ -1
UBR3-205ENST00000439681 GUCY1A2P33402 732 aa8.82□□□□□ -1
UBR3-205ENST00000439681 NOVP48745 357 aa8.82□□□□□ -1
UBR3-205ENST00000439681 SEC23AQ15436 765 aa8.82□□□□□ -1
UBR3-205ENST00000439681 Q6ZUG5 572 aa8.82□□□□□ -1
UBR3-205ENST00000439681 HOOK2Q96ED9 719 aa8.82□□□□□ -1
UBR3-205ENST00000439681 ZSCAN10Q96SZ4 725 aaPredicted RBP8.82□□□□□ -1
UBR3-205ENST00000439681 SENP2Q9HC62 589 aa8.82□□□□□ -1
UBR3-205ENST00000439681 CDK5RAP2Q96SN8 1893 aa8.82□□□□□ -1
UBR3-205ENST00000439681 FOCADQ5VW36 1801 aa8.82□□□□□ -1
UBR3-205ENST00000439681 SH2B2O14492 632 aaPredicted RBP8.82□□□□□ -1
UBR3-205ENST00000439681 GDF11O95390 407 aa8.82□□□□□ -1
UBR3-205ENST00000439681 TSPY3P0CV98 308 aa8.82□□□□□ -1
UBR3-205ENST00000439681 TSPY8P0CW00 308 aa8.82□□□□□ -1
UBR3-205ENST00000439681 CAP2P40123 477 aa8.82□□□□□ -1
UBR3-205ENST00000439681 AK2P54819 239 aa8.82□□□□□ -1
UBR3-205ENST00000439681 DCAF15Q66K64 600 aa8.82□□□□□ -1
UBR3-205ENST00000439681 RCSD1Q6JBY9 416 aa8.82□□□□□ -1
UBR3-205ENST00000439681 CHADLQ6NUI6 762 aa8.82□□□□□ -1
UBR3-205ENST00000439681 SIAH1Q8IUQ4 282 aa8.82□□□□□ -1
UBR3-205ENST00000439681 IL27Q8NEV9 243 aa8.82□□□□□ -1
UBR3-205ENST00000439681 ANKS1AQ92625 1134 aa8.82□□□□□ -1
UBR3-205ENST00000439681 LARP6Q9BRS8 491 aaKnown RBP8.82□□□□□ -1
UBR3-205ENST00000439681 MTA3Q9BTC8 594 aa8.82□□□□□ -1
UBR3-205ENST00000439681 ZNF341Q9BYN7 854 aa8.82□□□□□ -1
UBR3-205ENST00000439681 NAV1Q8NEY1 1877 aa8.81□□□□□ -1
UBR3-205ENST00000439681 ECM29Q5VYK3 1845 aa8.81□□□□□ -1
UBR3-205ENST00000439681 IFIT3O14879 490 aaKnown RBP8.81□□□□□ -1
UBR3-205ENST00000439681 GH2P01242 217 aa8.81□□□□□ -1
UBR3-205ENST00000439681 ABCB5Q2M3G0 1257 aa8.81□□□□□ -1
UBR3-205ENST00000439681 ENAHQ8N8S7 591 aaPredicted RBP8.81□□□□□ -1
UBR3-205ENST00000439681 SNX21Q969T3 373 aa8.81□□□□□ -1
UBR3-205ENST00000439681 KLRG1Q96E93 195 aa8.81□□□□□ -1
UBR3-205ENST00000439681 TMEM87BQ96K49 555 aa8.81□□□□□ -1
UBR3-205ENST00000439681 LY9Q9HBG7 655 aa8.81□□□□□ -1
UBR3-205ENST00000439681 BAZ2AQ9UIF9 1905 aaKnown RBP8.81□□□□□ -1
UBR3-205ENST00000439681 PLIN4Q96Q06 1357 aa8.81□□□□□ -1
UBR3-205ENST00000439681 TNKSO95271 1327 aa8.81□□□□□ -1
UBR3-205ENST00000439681 SIPA1L1O43166 1804 aa8.81□□□□□ -1
UBR3-205ENST00000439681 CTNND1O60716 968 aaKnown RBP8.8□□□□□ -1
UBR3-205ENST00000439681 YY1P25490 414 aa8.8□□□□□ -1
UBR3-205ENST00000439681 INPP5BP32019 993 aa8.8□□□□□ -1
UBR3-205ENST00000439681 LIFRP42702 1097 aa8.8□□□□□ -1
UBR3-205ENST00000439681 EVCP57679 992 aa8.8□□□□□ -1
UBR3-205ENST00000439681 PRKG1Q13976 671 aa8.8□□□□□ -1
UBR3-205ENST00000439681 SEPT2Q15019 361 aa8.8□□□□□ -1
UBR3-205ENST00000439681 TMEM67Q5HYA8 995 aa8.8□□□□□ -1
UBR3-205ENST00000439681 IQCA1Q86XH1 822 aa8.8□□□□□ -1
UBR3-205ENST00000439681 DGKHQ86XP1 1220 aa8.8□□□□□ -1
UBR3-205ENST00000439681 BRF1Q92994 677 aa8.8□□□□□ -1
UBR3-205ENST00000439681 CEP95Q96GE4 821 aa8.8□□□□□ -1
UBR3-205ENST00000439681 MTMR4Q9NYA4 1195 aa8.8□□□□□ -1
UBR3-205ENST00000439681 BRPF3Q9ULD4 1205 aa8.8□□□□□ -1
UBR3-205ENST00000439681 MPHOSPH10O00566 681 aaKnown RBP8.8□□□□□ -1
UBR3-205ENST00000439681 ST18O60284 1047 aa8.8□□□□□ -1
UBR3-205ENST00000439681 MAP3K11Q16584 847 aa8.8□□□□□ -1
UBR3-205ENST00000439681 TMEM179Q6ZVK1 233 aa8.8□□□□□ -1
UBR3-205ENST00000439681 MOB2Q70IA6 237 aa8.8□□□□□ -1
UBR3-205ENST00000439681 CLEC10AQ8IUN9 316 aa8.8□□□□□ -1
UBR3-205ENST00000439681 ZNF784Q8NCA9 323 aaPredicted RBP8.8□□□□□ -1
UBR3-205ENST00000439681 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.8□□□□□ -1
UBR3-205ENST00000439681 ZKSCAN4Q969J2 545 aaPredicted RBP8.8□□□□□ -1
UBR3-205ENST00000439681 UBAC1Q9BSL1 405 aa8.8□□□□□ -1
UBR3-205ENST00000439681 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms