RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 NBPF14Q5TI25 921 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 NBPF10Q6P3W6 841 aaKnown RBP15.46■□□□□ 0.07
PCNX3-202ENST00000439247 TTLL7Q6ZT98 887 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 TBC1D10CQ8IV04 446 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 NBPF15Q8N660 670 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 CCDC102AQ96A19 550 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 QTRT2Q9H974 415 aaKnown RBP15.46■□□□□ 0.07
PCNX3-202ENST00000439247 ADGRG1Q9Y653 693 aa15.46■□□□□ 0.07
PCNX3-202ENST00000439247 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.46■□□□□ 0.06
PCNX3-202ENST00000439247 CCDC175P0C221 793 aa15.46■□□□□ 0.06
PCNX3-202ENST00000439247 GUCY1A2P33402 732 aa15.46■□□□□ 0.06
PCNX3-202ENST00000439247 NOP2P46087 812 aaKnown RBP15.46■□□□□ 0.06
PCNX3-202ENST00000439247 POSTNQ15063 836 aa15.46■□□□□ 0.06
PCNX3-202ENST00000439247 KIF4BQ2VIQ3 1234 aa15.46■□□□□ 0.06
PCNX3-202ENST00000439247 SMYD4Q8IYR2 804 aaPredicted RBP15.46■□□□□ 0.06
PCNX3-202ENST00000439247 CMTR1Q8N1G2 835 aaKnown RBP15.46■□□□□ 0.06
PCNX3-202ENST00000439247 KCNJ14Q9UNX9 436 aa15.46■□□□□ 0.06
PCNX3-202ENST00000439247 AKAP2Q9Y2D5 859 aa15.46■□□□□ 0.06
PCNX3-202ENST00000439247 BTBD18B2RXH4 712 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 B4E1Z4 1266 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 DNAJC10Q8IXB1 793 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 SLC35F6Q8N357 371 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 CWC15Q9P013 229 aaKnown RBP15.45■□□□□ 0.06
PCNX3-202ENST00000439247 GOLGA6L9A6NEM1 432 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 NR1I3Q14994 352 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 BRD3Q15059 726 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 LEKR1Q6ZMV7 388 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 FBXL16Q8N461 479 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 NOA1Q8NC60 698 aaKnown RBP15.45■□□□□ 0.06
PCNX3-202ENST00000439247 L1RE1Q9UN81 338 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 ATRNO75882 1429 aa15.45■□□□□ 0.06
PCNX3-202ENST00000439247 GPAA1O43292 621 aa15.44■□□□□ 0.06
PCNX3-202ENST00000439247 JMYQ8N9B5 988 aa15.44■□□□□ 0.06
PCNX3-202ENST00000439247 GDAP1L1Q96MZ0 367 aa15.44■□□□□ 0.06
PCNX3-202ENST00000439247 AKR1B15C9JRZ8 316 aaPredicted RBP15.44■□□□□ 0.06
PCNX3-202ENST00000439247 CDC25AP30304 524 aa15.44■□□□□ 0.06
PCNX3-202ENST00000439247 TOB1P50616 345 aaPredicted RBP15.44■□□□□ 0.06
PCNX3-202ENST00000439247 HDXQ7Z353 690 aa15.44■□□□□ 0.06
PCNX3-202ENST00000439247 CDC23Q9UJX2 597 aa15.44■□□□□ 0.06
PCNX3-202ENST00000439247 TRPC5Q9UL62 973 aaPredicted RBP15.44■□□□□ 0.06
PCNX3-202ENST00000439247 LRRIQ3A6PVS8 624 aaPredicted RBP15.43■□□□□ 0.06
PCNX3-202ENST00000439247 EYA2O00167 538 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 SLC26A6Q9BXS9 759 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 ZBTB3Q9H5J0 574 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 PSD3Q9NYI0 1048 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 ZMYM6O95789 1325 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 APPP05067 770 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 IL15P40933 162 aaPredicted RBP15.43■□□□□ 0.06
PCNX3-202ENST00000439247 NCAPH2Q6IBW4 605 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 PACS2Q86VP3 889 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 IGSF22Q8N9C0 903 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
PCNX3-202ENST00000439247 CASP14P31944 242 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 CASP8Q14790 479 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 APOA5Q6Q788 366 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 KRI1Q8N9T8 703 aaKnown RBP15.43■□□□□ 0.06
PCNX3-202ENST00000439247 CHMP4CQ96CF2 233 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 XAGE2Q96GT9 111 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 ANGEL1Q9UNK9 670 aaKnown RBP15.43■□□□□ 0.06
PCNX3-202ENST00000439247 THSD7AQ9UPZ6 1657 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 C4AP0C0L4 1744 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 C4BP0C0L5 1744 aa15.43■□□□□ 0.06
PCNX3-202ENST00000439247 AFMP43652 599 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 KCNQ4P56696 695 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 NFXL1Q6ZNB6 911 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 HINFPQ9BQA5 517 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 FAM217BQ9NTX9 383 aaPredicted RBP15.42■□□□□ 0.06
PCNX3-202ENST00000439247 FAM237AA0A1B0GTK4 181 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 H7C1W4 665 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 RNF225M0QZC1 329 aaPredicted RBP15.42■□□□□ 0.06
PCNX3-202ENST00000439247 KIF5CO60282 957 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 FXR1P51114 621 aaKnown RBP eCLIP15.42■□□□□ 0.06
PCNX3-202ENST00000439247 NR5A1Q13285 461 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 APTXQ7Z2E3 356 aaKnown RBP15.42■□□□□ 0.06
PCNX3-202ENST00000439247 TFR2Q9UP52 801 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 PCDHB6Q9Y5E3 794 aa15.42■□□□□ 0.06
PCNX3-202ENST00000439247 IARSP41252 1262 aaKnown RBP15.41■□□□□ 0.06
PCNX3-202ENST00000439247 MORC3Q14149 939 aa15.41■□□□□ 0.06
PCNX3-202ENST00000439247 NTRK3Q16288 839 aa15.41■□□□□ 0.06
PCNX3-202ENST00000439247 LRRC31Q6UY01 552 aa15.41■□□□□ 0.06
PCNX3-202ENST00000439247 ENOX1Q8TC92 643 aaKnown RBP15.41■□□□□ 0.06
PCNX3-202ENST00000439247 RIN2Q8WYP3 895 aaPredicted RBP15.41■□□□□ 0.06
PCNX3-202ENST00000439247 STAMQ92783 540 aa15.41■□□□□ 0.06
PCNX3-202ENST00000439247 TRIM10Q9UDY6 481 aa15.41■□□□□ 0.06
PCNX3-202ENST00000439247 ZNF330Q9Y3S2 320 aaPredicted RBP15.41■□□□□ 0.06
PCNX3-202ENST00000439247 TRDNQ13061 729 aa15.41■□□□□ 0.06
PCNX3-202ENST00000439247 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
PCNX3-202ENST00000439247 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.41■□□□□ 0.06
PCNX3-202ENST00000439247 PAXIP1Q6ZW49 1069 aaPredicted RBP15.41■□□□□ 0.06
PCNX3-202ENST00000439247 RAB21Q9UL25 225 aa15.41■□□□□ 0.06
PCNX3-202ENST00000439247 A0A1B0GTH6 734 aa15.41■□□□□ 0.06
PCNX3-202ENST00000439247 CCT6AP40227 531 aaKnown RBP15.41■□□□□ 0.06
PCNX3-202ENST00000439247 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.41■□□□□ 0.06
PCNX3-202ENST00000439247 EIF3CLB5ME19 914 aaKnown RBP15.4■□□□□ 0.06
PCNX3-202ENST00000439247 SH2B2O14492 632 aaPredicted RBP15.4■□□□□ 0.06
PCNX3-202ENST00000439247 ZMYND10O75800 440 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 TRIM29Q14134 588 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 PPFIBP1Q86W92 1011 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms