RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TSPY3P0CV98 308 aa24.38■■□□□ 1.49
CHD3-204ENST00000439235 TSPY8P0CW00 308 aa24.38■■□□□ 1.49
CHD3-204ENST00000439235 COL9A3Q14050 684 aaPredicted RBP24.38■■□□□ 1.49
CHD3-204ENST00000439235 TATDN1Q6P1N9 297 aa24.38■■□□□ 1.49
CHD3-204ENST00000439235 CDAN1Q8IWY9 1227 aa24.38■■□□□ 1.49
CHD3-204ENST00000439235 TCEANC2Q96MN5 208 aa24.38■■□□□ 1.49
CHD3-204ENST00000439235 CLEC11AQ9Y240 323 aa24.38■■□□□ 1.49
CHD3-204ENST00000439235 ERICH2A1L162 156 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 FAM196BA6NMK8 535 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 AK2P54819 239 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 TFAP4Q01664 338 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 SUPT20HL1Q3ZLR7 823 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 CCDC178Q5BJE1 867 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 FAM47AQ5JRC9 791 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 Q6ZUG5 572 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 CHST3Q7LGC8 479 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 HSCBQ8IWL3 235 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 FBXL16Q8N461 479 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 ZNF526Q8TF50 670 aaPredicted RBP24.37■■□□□ 1.49
CHD3-204ENST00000439235 NMRK2Q9NPI5 230 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 PLIN4Q96Q06 1357 aa24.37■■□□□ 1.49
CHD3-204ENST00000439235 ADM5C9JUS6 153 aa24.36■■□□□ 1.49
CHD3-204ENST00000439235 IFIT3O14879 490 aaKnown RBP24.36■■□□□ 1.49
CHD3-204ENST00000439235 MAP3K10Q02779 954 aa24.36■■□□□ 1.49
CHD3-204ENST00000439235 BECN1Q14457 450 aa24.36■■□□□ 1.49
CHD3-204ENST00000439235 CERKLQ49MI3 558 aaPredicted RBP24.36■■□□□ 1.49
CHD3-204ENST00000439235 TMEM67Q5HYA8 995 aa24.36■■□□□ 1.49
CHD3-204ENST00000439235 NBPF12Q5TAG4 269 aaPredicted RBP24.36■■□□□ 1.49
CHD3-204ENST00000439235 CDC37L1Q7L3B6 337 aa24.36■■□□□ 1.49
CHD3-204ENST00000439235 LDHDQ86WU2 507 aa24.36■■□□□ 1.49
CHD3-204ENST00000439235 NEDD1Q8NHV4 660 aa24.36■■□□□ 1.49
CHD3-204ENST00000439235 NKX2-3Q8TAU0 364 aa24.36■■□□□ 1.49
CHD3-204ENST00000439235 SH2B2O14492 632 aaPredicted RBP24.35■■□□□ 1.49
CHD3-204ENST00000439235 ZSCAN10Q96SZ4 725 aaPredicted RBP24.35■■□□□ 1.49
CHD3-204ENST00000439235 LRRC2Q9BYS8 371 aa24.35■■□□□ 1.49
CHD3-204ENST00000439235 AGXT2Q9BYV1 514 aa24.35■■□□□ 1.49
CHD3-204ENST00000439235 TCP11L1Q9NUJ3 509 aa24.35■■□□□ 1.49
CHD3-204ENST00000439235 ANGEL1Q9UNK9 670 aaKnown RBP24.35■■□□□ 1.49
CHD3-204ENST00000439235 TNKSO95271 1327 aa24.35■■□□□ 1.49
CHD3-204ENST00000439235 PPP4R3BQ5MIZ7 849 aa24.34■■□□□ 1.49
CHD3-204ENST00000439235 SLURP2P0DP57 97 aa24.33■■□□□ 1.49
CHD3-204ENST00000439235 AKR1B1P15121 316 aa24.33■■□□□ 1.49
CHD3-204ENST00000439235 NF2P35240 595 aa24.33■■□□□ 1.49
CHD3-204ENST00000439235 TOB2Q14106 344 aaPredicted RBP24.33■■□□□ 1.49
CHD3-204ENST00000439235 WTAPQ15007 396 aa24.33■■□□□ 1.49
CHD3-204ENST00000439235 MIGA2Q7L4E1 593 aa24.33■■□□□ 1.49
CHD3-204ENST00000439235 USP48Q86UV5 1035 aa24.33■■□□□ 1.49
CHD3-204ENST00000439235 TMTC2Q8N394 836 aa24.33■■□□□ 1.49
CHD3-204ENST00000439235 BRF1Q92994 677 aa24.33■■□□□ 1.49
CHD3-204ENST00000439235 ZKSCAN3Q9BRR0 538 aa24.33■■□□□ 1.49
CHD3-204ENST00000439235 ZNF341Q9BYN7 854 aa24.33■■□□□ 1.49
CHD3-204ENST00000439235 MPHOSPH10O00566 681 aaKnown RBP24.32■■□□□ 1.48
CHD3-204ENST00000439235 CD2BP2O95400 341 aaKnown RBP24.32■■□□□ 1.48
CHD3-204ENST00000439235 LIFRP42702 1097 aa24.32■■□□□ 1.48
CHD3-204ENST00000439235 ABCB5Q2M3G0 1257 aa24.32■■□□□ 1.48
CHD3-204ENST00000439235 PRAMEF18Q5VWM3 479 aa24.32■■□□□ 1.48
CHD3-204ENST00000439235 TMEM179Q6ZVK1 233 aa24.32■■□□□ 1.48
CHD3-204ENST00000439235 IGDCC4Q8TDY8 1250 aa24.32■■□□□ 1.48
CHD3-204ENST00000439235 CABP5Q9NP86 173 aa24.32■■□□□ 1.48
CHD3-204ENST00000439235 LIMCH1Q9UPQ0 1083 aa24.32■■□□□ 1.48
CHD3-204ENST00000439235 SSC5DA1L4H1 1573 aa24.31■■□□□ 1.48
CHD3-204ENST00000439235 K7ELQ4 463 aaPredicted RBP24.31■■□□□ 1.48
CHD3-204ENST00000439235 POTEIP0CG38 1075 aa24.31■■□□□ 1.48
CHD3-204ENST00000439235 POTEJP0CG39 1038 aa24.31■■□□□ 1.48
CHD3-204ENST00000439235 NOL8Q76FK4 1167 aaKnown RBP24.31■■□□□ 1.48
CHD3-204ENST00000439235 CDCA5Q96FF9 252 aa24.31■■□□□ 1.48
CHD3-204ENST00000439235 ZSCAN31Q96LW9 406 aaPredicted RBP24.31■■□□□ 1.48
CHD3-204ENST00000439235 GLIS2Q9BZE0 524 aaPredicted RBP24.31■■□□□ 1.48
CHD3-204ENST00000439235 LY9Q9HBG7 655 aa24.31■■□□□ 1.48
CHD3-204ENST00000439235 MYH8P13535 1937 aa24.31■■□□□ 1.48
CHD3-204ENST00000439235 CCDC69A6NI79 296 aa24.3■■□□□ 1.48
CHD3-204ENST00000439235 GDF11O95390 407 aa24.3■■□□□ 1.48
CHD3-204ENST00000439235 SEC23AQ15436 765 aa24.3■■□□□ 1.48
CHD3-204ENST00000439235 IFIT1BQ5T764 474 aaKnown RBP24.3■■□□□ 1.48
CHD3-204ENST00000439235 NFXL1Q6ZNB6 911 aa24.3■■□□□ 1.48
CHD3-204ENST00000439235 DGKHQ86XP1 1220 aa24.3■■□□□ 1.48
CHD3-204ENST00000439235 ENAHQ8N8S7 591 aaPredicted RBP24.3■■□□□ 1.48
CHD3-204ENST00000439235 TBC1D2Q9BYX2 928 aa24.3■■□□□ 1.48
CHD3-204ENST00000439235 GPBP1L1Q9HC44 474 aaPredicted RBP24.3■■□□□ 1.48
CHD3-204ENST00000439235 GINM1Q9NU53 330 aa24.3■■□□□ 1.48
CHD3-204ENST00000439235 IGKV6D-41A0A0C4DH26 115 aa24.29■■□□□ 1.48
CHD3-204ENST00000439235 MAP1SQ66K74 1059 aaPredicted RBP24.29■■□□□ 1.48
CHD3-204ENST00000439235 SGMS1Q86VZ5 419 aa24.29■■□□□ 1.48
CHD3-204ENST00000439235 GPHNQ9NQX3 736 aaPredicted RBP24.29■■□□□ 1.48
CHD3-204ENST00000439235 IL17RBQ9NRM6 502 aa24.29■■□□□ 1.48
CHD3-204ENST00000439235 NMT2O60551 498 aa24.28■■□□□ 1.48
CHD3-204ENST00000439235 CAP2P40123 477 aa24.28■■□□□ 1.48
CHD3-204ENST00000439235 APOBRQ0VD83 1088 aa24.28■■□□□ 1.48
CHD3-204ENST00000439235 CEP95Q96GE4 821 aa24.28■■□□□ 1.48
CHD3-204ENST00000439235 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.28■■□□□ 1.48
CHD3-204ENST00000439235 SH2B1Q9NRF2 756 aaPredicted RBP24.28■■□□□ 1.48
CHD3-204ENST00000439235 KLF18A0A0U1RQI7 1052 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 PHF20L1A8MW92 1017 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 PPP1R12BO60237 982 aaPredicted RBP24.27■■□□□ 1.48
CHD3-204ENST00000439235 CTNND1O60716 968 aaKnown RBP24.27■■□□□ 1.48
CHD3-204ENST00000439235 GH2P01242 217 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 EVCP57679 992 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 SYNE3Q6ZMZ3 975 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 ANKS1AQ92625 1134 aa24.27■■□□□ 1.48
CHD3-204ENST00000439235 KANSL2Q9H9L4 492 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms