RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 PRKCZQ05513 592 aa11.24□□□□□ -0.61
AC011228.1-201ENST00000439027 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
AC011228.1-201ENST00000439027 NAA16Q6N069 864 aaPredicted RBP11.24□□□□□ -0.61
AC011228.1-201ENST00000439027 SH3RF3Q8TEJ3 882 aaPredicted RBP11.24□□□□□ -0.61
AC011228.1-201ENST00000439027 DBNDD2Q9BQY9 259 aa11.24□□□□□ -0.61
AC011228.1-201ENST00000439027 OSBPL5Q9H0X9 879 aaPredicted RBP11.24□□□□□ -0.61
AC011228.1-201ENST00000439027 FPGT-TNNI3KV9GXZ4 949 aa11.24□□□□□ -0.61
AC011228.1-201ENST00000439027 MKI67P46013 3256 aaKnown RBP11.24□□□□□ -0.61
AC011228.1-201ENST00000439027 DOCK2Q92608 1830 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 CCL5P13501 91 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 UBXN2AP68543 259 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 SPP2Q13103 211 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 HABP4Q5JVS0 413 aaKnown RBP11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 SSH3Q8TE77 659 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 TRIM34Q9BYJ4 488 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 RNF208Q9H0X6 261 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 CHMP4BQ9H444 224 aaKnown RBP11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 GPR108Q9NPR9 543 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 PPP4R2Q9NY27 417 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 AATFQ9NY61 560 aaKnown RBP eCLIP11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 GABRQQ9UN88 632 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 SLC45A1Q9Y2W3 748 aa11.23□□□□□ -0.61
AC011228.1-201ENST00000439027 TNPO2O14787 897 aaKnown RBP11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 ADCY3O60266 1144 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 AAMPQ13685 434 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 TREML2Q5T2D2 321 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 MAPKAPK5Q8IW41 473 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 ANKRD13CQ8N6S4 541 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 ZNF280CQ8ND82 737 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 NKX2-3Q8TAU0 364 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 TGFBRAP1Q8WUH2 860 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 ZBTB40Q9NUA8 1239 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 PI4KBQ9UBF8 816 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 PNMA3Q9UL41 463 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 AGTPBP1Q9UPW5 1226 aa11.22□□□□□ -0.61
AC011228.1-201ENST00000439027 RBBP6Q7Z6E9 1792 aaKnown RBP11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 USP17L5A8MUK1 530 aa11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 CYP2E1P05181 493 aaPredicted RBP11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 CAP2P40123 477 aa11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 ZAP70P43403 619 aa11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 FLT3LGP49771 235 aa11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 HMGCS2P54868 508 aa11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 PABPC4Q13310 644 aaKnown RBP eCLIP11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 RRP1BQ14684 758 aaKnown RBP11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 SLAIN1Q8ND83 568 aa11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 DPF3Q92784 378 aa11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 DHX36Q9H2U1 1008 aaKnown RBP11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 HERC5Q9UII4 1024 aaKnown RBP11.21□□□□□ -0.61
AC011228.1-201ENST00000439027 H0YGN5 161 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 GJB1P08034 283 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 ELNP15502 786 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 CYP7A1P22680 504 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 PPP4CP60510 307 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 B4GALNT3Q6L9W6 998 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 CRACR2BQ8N4Y2 399 aaPredicted RBP11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 COA7Q96BR5 231 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 SHISA4Q96DD7 197 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 TBC1D2Q9BYX2 928 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 UNC93B1Q9H1C4 597 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 AS3MTQ9HBK9 375 aa11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 PIH1D3Q9NQM4 214 aaKnown RBP11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 SAP30BPQ9UHR5 308 aaKnown RBP11.2□□□□□ -0.62
AC011228.1-201ENST00000439027 DOCK1Q14185 1865 aa11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 IDH1O75874 414 aaKnown RBP11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 INHAP05111 366 aa11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 GJA8P48165 433 aa11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 DYNLL1P63167 89 aaKnown RBP11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 ADGRA1Q86SQ6 560 aa11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 FOXP4Q8IVH2 680 aaPredicted RBP11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 TLR7Q9NYK1 1049 aaKnown RBP11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 TMOD4Q9NZQ9 345 aa11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 DBNLQ9UJU6 430 aaKnown RBP11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 PALD1Q9ULE6 856 aa11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 NOP58Q9Y2X3 529 aaKnown RBP11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 DOCK3Q8IZD9 2030 aa11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 COL2A1P02458 1487 aaPredicted RBP11.19□□□□□ -0.62
AC011228.1-201ENST00000439027 FLT1P17948 1338 aa11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 STK25O00506 426 aa11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 GDF11O95390 407 aa11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 TFRCP02786 760 aaKnown RBP11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 HLA-DOAP06340 250 aa11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 ASNSP08243 561 aa11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 GCLCP48506 637 aaPredicted RBP11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 IRX3P78415 501 aaPredicted RBP11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 MTMR2Q13614 643 aa11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 FAM110CQ1W6H9 321 aa11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 U2AF1L4Q8WU68 220 aaKnown RBP11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 EAF2Q96CJ1 260 aaPredicted RBP11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 ZNF512BQ96KM6 892 aaPredicted RBP11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 BCL11AQ9H165 835 aa11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 ASCC2Q9H1I8 757 aaPredicted RBP11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 BRCA2P51587 3418 aa11.18□□□□□ -0.62
AC011228.1-201ENST00000439027 FARP2O94887 1054 aaPredicted RBP11.17□□□□□ -0.62
AC011228.1-201ENST00000439027 SGPL1O95470 568 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms