RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 KRT23Q9C075 422 aa12.5□□□□□ -0.41
HLA-DMB-259ENST00000438510 NBPF3Q9H094 633 aa12.5□□□□□ -0.41
HLA-DMB-259ENST00000438510 GINM1Q9NU53 330 aa12.5□□□□□ -0.41
HLA-DMB-259ENST00000438510 ZNF112Q9UJU3 913 aa12.5□□□□□ -0.41
HLA-DMB-259ENST00000438510 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
HLA-DMB-259ENST00000438510 CSADQ9Y600 493 aa12.5□□□□□ -0.41
HLA-DMB-259ENST00000438510 PTPRFP10586 1907 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 NEDD4P46934 1319 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 E7EWF7 191 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 SMIM22K7EJ46 135 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 CTNND1O60716 968 aaKnown RBP12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 ANAPC15P60006 121 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 FMR1Q06787 632 aaKnown RBP eCLIP12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 TSGA10IPQ3SY00 556 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 NCOA7Q8NI08 942 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 ESR2Q92731 530 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 KCNB2Q92953 911 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 CEP350Q5VT06 3117 aa12.49□□□□□ -0.41
HLA-DMB-259ENST00000438510 PLIN4Q96Q06 1357 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 TSPY2A6NKD2 308 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 TMEM88BA6NKF7 163 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 PHF20L1A8MW92 1017 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 MPHOSPH10O00566 681 aaKnown RBP12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 RANBP6O60518 1105 aaKnown RBP12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 PRDM1O75626 825 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 ASNSP08243 561 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 SLURP2P0DP57 97 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 RASA1P20936 1047 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 CAP2P40123 477 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 ABCB5Q2M3G0 1257 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 NOL9Q5SY16 702 aaKnown RBP12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 CST9Q5W186 159 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 TMEM179Q6ZVK1 233 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 SCYL3Q8IZE3 742 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 PICK1Q9NRD5 415 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
HLA-DMB-259ENST00000438510 GDF11O95390 407 aa12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 HMGB1P09429 215 aaKnown RBP12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 PSMA5P28066 241 aa12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 INPP5BP32019 993 aa12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 APLP1P51693 650 aa12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 VGLL4Q14135 290 aa12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 PPP4R3BQ5MIZ7 849 aa12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 TBC1D2Q9BYX2 928 aa12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 C22orf23Q9BZE7 217 aa12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 ZBTB21Q9ULJ3 1066 aa12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 SNX14Q9Y5W7 946 aa12.47□□□□□ -0.41
HLA-DMB-259ENST00000438510 B4E1Z4 1266 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 UBE2Q2LH0YL09 131 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 KDM4AO75164 1064 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 GH2P01242 217 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 AKR1B1P15121 316 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 HUNKP57058 714 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 TFAP4Q01664 338 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 LDLRAD1Q5T700 205 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 STOX1Q6ZVD7 989 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 MOB2Q70IA6 237 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 IQCA1Q86XH1 822 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 RASEFQ8IZ41 740 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 ZKSCAN4Q969J2 545 aaPredicted RBP12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 NEK1Q96PY6 1258 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 INCENPQ9NQS7 918 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 ABT1Q9ULW3 272 aaKnown RBP12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 TAF6LQ9Y6J9 622 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 TLL2Q9Y6L7 1015 aa12.46□□□□□ -0.41
HLA-DMB-259ENST00000438510 LOC285556D6RIA3 1793 aa12.46□□□□□ -0.42
HLA-DMB-259ENST00000438510 MCM5P33992 734 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 RBM25P49756 843 aaKnown RBP12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 RRP1BQ14684 758 aaKnown RBP12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 SART3Q15020 963 aaKnown RBP12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 RAB3GAP1Q15042 981 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 CCDC178Q5BJE1 867 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 FAM47AQ5JRC9 791 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 SAPCD2Q86UD0 394 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 NEDD1Q8NHV4 660 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 JAKMIP1Q96N16 626 aaKnown RBP12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 UBAC1Q9BSL1 405 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 KANSL2Q9H9L4 492 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 AS3MTQ9HBK9 375 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 TACC3Q9Y6A5 838 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 SNCAIPQ9Y6H5 919 aa12.45□□□□□ -0.42
HLA-DMB-259ENST00000438510 WDR19Q8NEZ3 1342 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 ERICH2A1L162 156 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 SPDYE5A6NIY4 337 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 USP17L5A8MUK1 530 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 ICA1Q05084 483 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 BLOC1S2Q6QNY1 142 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 ERO1BQ86YB8 467 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 MB21D2Q8IYB1 491 aaPredicted RBP12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 SLC10A4Q96EP9 437 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 IL17RAQ96F46 866 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 HHIPL1Q96JK4 782 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms