RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 KMT5BQ4FZB7 885 aa19.11■□□□□ 0.65
TTC3-209ENST00000438055 FBXO38Q6PIJ6 1188 aa19.11■□□□□ 0.65
TTC3-209ENST00000438055 CTCFLQ8NI51 663 aaPredicted RBP19.11■□□□□ 0.65
TTC3-209ENST00000438055 KRT2P35908 639 aa19.11■□□□□ 0.65
TTC3-209ENST00000438055 DESI2Q9BSY9 194 aa19.11■□□□□ 0.65
TTC3-209ENST00000438055 USP17L12C9JPN9 530 aa19.11■□□□□ 0.65
TTC3-209ENST00000438055 USP17L21D6R901 530 aa19.11■□□□□ 0.65
TTC3-209ENST00000438055 NLRP5P59047 1200 aa19.11■□□□□ 0.65
TTC3-209ENST00000438055 FAM47AQ5JRC9 791 aa19.11■□□□□ 0.65
TTC3-209ENST00000438055 ADGRA1Q86SQ6 560 aa19.11■□□□□ 0.65
TTC3-209ENST00000438055 PPFIBP1Q86W92 1011 aa19.11■□□□□ 0.65
TTC3-209ENST00000438055 SMYD4Q8IYR2 804 aaPredicted RBP19.11■□□□□ 0.65
TTC3-209ENST00000438055 STK36Q9NRP7 1315 aa19.1■□□□□ 0.65
TTC3-209ENST00000438055 PLEKHA8P1O95397 391 aa19.1■□□□□ 0.65
TTC3-209ENST00000438055 FMR1Q06787 632 aaKnown RBP eCLIP19.1■□□□□ 0.652e-10■■■■□ 23.8
TTC3-209ENST00000438055 SYCP1Q15431 976 aa19.1■□□□□ 0.65
TTC3-209ENST00000438055 MLKLQ8NB16 471 aa19.1■□□□□ 0.65
TTC3-209ENST00000438055 TFCP2L1Q9NZI6 479 aa19.1■□□□□ 0.65
TTC3-209ENST00000438055 FBXO2Q9UK22 296 aaPredicted RBP19.1■□□□□ 0.65
TTC3-209ENST00000438055 LAMB4A4D0S4 1761 aa19.1■□□□□ 0.65
TTC3-209ENST00000438055 KANK3Q6NY19 840 aa19.1■□□□□ 0.65
TTC3-209ENST00000438055 ZSCAN10Q96SZ4 725 aaPredicted RBP19.1■□□□□ 0.65
TTC3-209ENST00000438055 ZSWIM4Q9H7M6 989 aa19.1■□□□□ 0.65
TTC3-209ENST00000438055 AATFQ9NY61 560 aaKnown RBP eCLIP19.1■□□□□ 0.65
TTC3-209ENST00000438055 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.1■□□□□ 0.655e-7■■■□□ 16.6
TTC3-209ENST00000438055 BCL9O00512 1426 aa19.09■□□□□ 0.65
TTC3-209ENST00000438055 CARD6Q9BX69 1037 aa19.09■□□□□ 0.65
TTC3-209ENST00000438055 ABCC6O95255 1503 aa19.09■□□□□ 0.65
TTC3-209ENST00000438055 RTL9Q8NET4 1388 aa19.09■□□□□ 0.65
TTC3-209ENST00000438055 ZSCAN20P17040 1043 aaPredicted RBP19.09■□□□□ 0.65
TTC3-209ENST00000438055 BMP6P22004 513 aa19.08■□□□□ 0.65
TTC3-209ENST00000438055 BAZ2BQ9UIF8 2168 aaKnown RBP19.08■□□□□ 0.65
TTC3-209ENST00000438055 TJP1Q07157 1748 aa19.08■□□□□ 0.65
TTC3-209ENST00000438055 TSPY2A6NKD2 308 aa19.08■□□□□ 0.65
TTC3-209ENST00000438055 CASQ1P31415 396 aa19.08■□□□□ 0.65
TTC3-209ENST00000438055 TEX35Q5T0J7 233 aa19.08■□□□□ 0.65
TTC3-209ENST00000438055 SPECC1LQ69YQ0 1117 aa19.08■□□□□ 0.65
TTC3-209ENST00000438055 ENAHQ8N8S7 591 aaPredicted RBP19.08■□□□□ 0.65
TTC3-209ENST00000438055 LRRN4CLQ8ND94 238 aa19.08■□□□□ 0.65
TTC3-209ENST00000438055 ARHGAP6O43182 974 aa19.08■□□□□ 0.64
TTC3-209ENST00000438055 ERFEQ4G0M1 354 aa19.08■□□□□ 0.64
TTC3-209ENST00000438055 KRT222Q8N1A0 295 aa19.08■□□□□ 0.64
TTC3-209ENST00000438055 ARGLU1Q9NWB6 273 aaPredicted RBP19.08■□□□□ 0.64
TTC3-209ENST00000438055 MCM7P33993 719 aa19.07■□□□□ 0.64
TTC3-209ENST00000438055 FILIP1LQ4L180 1135 aa19.07■□□□□ 0.64
TTC3-209ENST00000438055 INTS5Q6P9B9 1019 aaKnown RBP19.07■□□□□ 0.64
TTC3-209ENST00000438055 PARP4Q9UKK3 1724 aaKnown RBP19.07■□□□□ 0.64
TTC3-209ENST00000438055 PPP2R2CQ9Y2T4 447 aa19.07■□□□□ 0.64
TTC3-209ENST00000438055 SRPRBQ9Y5M8 271 aaKnown RBP19.07■□□□□ 0.64
TTC3-209ENST00000438055 PIK3AP1Q6ZUJ8 805 aa19.07■□□□□ 0.64
TTC3-209ENST00000438055 SYMPKQ92797 1274 aaKnown RBP19.07■□□□□ 0.64
TTC3-209ENST00000438055 HSD3B7Q9H2F3 369 aa19.07■□□□□ 0.64
TTC3-209ENST00000438055 BLZF1Q9H2G9 400 aa19.07■□□□□ 0.64
TTC3-209ENST00000438055 LZTFL1Q9NQ48 299 aa19.07■□□□□ 0.64
TTC3-209ENST00000438055 GLI3P10071 1580 aa19.07■□□□□ 0.64
TTC3-209ENST00000438055 NMT2O60551 498 aa19.07■□□□□ 0.64
TTC3-209ENST00000438055 CAMTA2O94983 1202 aa19.06■□□□□ 0.64
TTC3-209ENST00000438055 ITPK1Q13572 414 aa19.06■□□□□ 0.64
TTC3-209ENST00000438055 MAPK8IP1Q9UQF2 711 aa19.06■□□□□ 0.64
TTC3-209ENST00000438055 PNPLA7Q6ZV29 1317 aa19.06■□□□□ 0.64
TTC3-209ENST00000438055 TPM1P09493 284 aa19.06■□□□□ 0.64
TTC3-209ENST00000438055 DMTNQ08495 405 aa19.06■□□□□ 0.64
TTC3-209ENST00000438055 AK7Q96M32 723 aa19.06■□□□□ 0.64
TTC3-209ENST00000438055 RNF26Q9BY78 433 aaPredicted RBP19.06■□□□□ 0.64
TTC3-209ENST00000438055 CCT6AP40227 531 aaKnown RBP19.06■□□□□ 0.64
TTC3-209ENST00000438055 ZBTB9Q96C00 473 aa19.06■□□□□ 0.64
TTC3-209ENST00000438055 SPEF2Q9C093 1822 aa19.06■□□□□ 0.64
TTC3-209ENST00000438055 TTC38Q5R3I4 469 aa19.05■□□□□ 0.64
TTC3-209ENST00000438055 DDX41Q9UJV9 622 aaKnown RBP19.05■□□□□ 0.64
TTC3-209ENST00000438055 CCDC12Q8WUD4 166 aaPredicted RBP19.05■□□□□ 0.64
TTC3-209ENST00000438055 ATRNO75882 1429 aa19.05■□□□□ 0.64
TTC3-209ENST00000438055 KCNQ2O43526 872 aa19.04■□□□□ 0.64
TTC3-209ENST00000438055 NTSR2O95665 410 aa19.04■□□□□ 0.64
TTC3-209ENST00000438055 NOM1Q5C9Z4 860 aaKnown RBP19.04■□□□□ 0.64
TTC3-209ENST00000438055 EARS2Q5JPH6 523 aaKnown RBP19.04■□□□□ 0.64
TTC3-209ENST00000438055 RRAGBQ5VZM2 374 aa19.04■□□□□ 0.64
TTC3-209ENST00000438055 TMCO3Q6UWJ1 677 aa19.04■□□□□ 0.64
TTC3-209ENST00000438055 CDC25AP30304 524 aa19.04■□□□□ 0.64
TTC3-209ENST00000438055 PTGDRQ13258 359 aa19.04■□□□□ 0.64
TTC3-209ENST00000438055 IGSF22Q8N9C0 903 aa19.04■□□□□ 0.64
TTC3-209ENST00000438055 ENOX1Q8TC92 643 aaKnown RBP19.04■□□□□ 0.64
TTC3-209ENST00000438055 SYNRGQ9UMZ2 1314 aa19.04■□□□□ 0.64
TTC3-209ENST00000438055 TOGARAM2Q6ZUX3 1019 aa19.04■□□□□ 0.64
TTC3-209ENST00000438055 DZIP1Q86YF9 867 aaKnown RBP19.04■□□□□ 0.64
TTC3-209ENST00000438055 GTPBP4Q9BZE4 634 aaKnown RBP19.04■□□□□ 0.64
TTC3-209ENST00000438055 CRNKL1Q9BZJ0 848 aaKnown RBP19.04■□□□□ 0.64
TTC3-209ENST00000438055 MCM9Q9NXL9 1143 aa19.04■□□□□ 0.64
TTC3-209ENST00000438055 NUP188Q5SRE5 1749 aa19.03■□□□□ 0.64
TTC3-209ENST00000438055 PLCD1P51178 756 aa19.03■□□□□ 0.64
TTC3-209ENST00000438055 CELF1Q92879 486 aaKnown RBP19.03■□□□□ 0.64
TTC3-209ENST00000438055 CTNND2Q9UQB3 1225 aa19.03■□□□□ 0.64
TTC3-209ENST00000438055 NWD2Q9ULI1 1742 aa19.03■□□□□ 0.64
TTC3-209ENST00000438055 C3orf67Q6ZVT6 689 aa19.03■□□□□ 0.64
TTC3-209ENST00000438055 EPC1Q9H2F5 836 aa19.03■□□□□ 0.64
TTC3-209ENST00000438055 N4BP3O15049 544 aa19.02■□□□□ 0.64
TTC3-209ENST00000438055 TEX33O43247 280 aa19.02■□□□□ 0.64
TTC3-209ENST00000438055 ANKRD20A12PQ8NF67 263 aa19.02■□□□□ 0.64
TTC3-209ENST00000438055 PLIN2Q99541 437 aa19.02■□□□□ 0.64
TTC3-209ENST00000438055 INTS13Q9NVM9 706 aa19.02■□□□□ 0.64
TTC3-209ENST00000438055 AKR1B15C9JRZ8 316 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms