RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 EVI5LQ96CN4 794 aa21.42■■□□□ 1.02
NCSTN-208ENST00000438008 FSD1Q9BTV5 496 aa21.42■■□□□ 1.02
NCSTN-208ENST00000438008 MCOLN1Q9GZU1 580 aa21.42■■□□□ 1.02
NCSTN-208ENST00000438008 ZBTB21Q9ULJ3 1066 aa21.42■■□□□ 1.02
NCSTN-208ENST00000438008 TLR2O60603 784 aa21.41■■□□□ 1.02
NCSTN-208ENST00000438008 GDF11O95390 407 aa21.41■■□□□ 1.02
NCSTN-208ENST00000438008 SHMT1P34896 483 aa21.41■■□□□ 1.02
NCSTN-208ENST00000438008 TICAM2Q86XR7 235 aa21.41■■□□□ 1.02
NCSTN-208ENST00000438008 DDRGK1Q96HY6 314 aa21.41■■□□□ 1.02
NCSTN-208ENST00000438008 OSBPL3Q9H4L5 887 aa21.41■■□□□ 1.02
NCSTN-208ENST00000438008 SLC45A1Q9Y2W3 748 aa21.41■■□□□ 1.02
NCSTN-208ENST00000438008 SP3Q02447 781 aa21.4■■□□□ 1.02
NCSTN-208ENST00000438008 CERKLQ49MI3 558 aaPredicted RBP21.4■■□□□ 1.02
NCSTN-208ENST00000438008 SH3D19Q5HYK7 790 aa21.4■■□□□ 1.02
NCSTN-208ENST00000438008 C12orf60Q5U649 245 aa21.4■■□□□ 1.02
NCSTN-208ENST00000438008 GIMAP6Q6P9H5 292 aa21.4■■□□□ 1.02
NCSTN-208ENST00000438008 PHIPQ8WWQ0 1821 aa21.4■■□□□ 1.02
NCSTN-208ENST00000438008 NAV1Q8NEY1 1877 aa21.39■■□□□ 1.02
NCSTN-208ENST00000438008 USP17L12C9JPN9 530 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 USP17L21D6R901 530 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 GPAA1O43292 621 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 CYP2D6P10635 497 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 GNAT2P19087 354 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 EVX2Q03828 476 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 PKN2Q16513 984 aaKnown RBP21.39■■□□□ 1.01
NCSTN-208ENST00000438008 SHROOM1Q2M3G4 852 aaPredicted RBP21.39■■□□□ 1.01
NCSTN-208ENST00000438008 ZMYM1Q5SVZ6 1142 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 PLEKHM2Q8IWE5 1019 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 PROCA1Q8NCQ7 364 aaPredicted RBP21.39■■□□□ 1.01
NCSTN-208ENST00000438008 ERO1AQ96HE7 468 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 ABHD8Q96I13 439 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 SWAP70Q9UH65 585 aa21.39■■□□□ 1.01
NCSTN-208ENST00000438008 GSG1L2A8MUP6 293 aa21.38■■□□□ 1.01
NCSTN-208ENST00000438008 M0R2C6 588 aa21.38■■□□□ 1.01
NCSTN-208ENST00000438008 GH2P01242 217 aa21.38■■□□□ 1.01
NCSTN-208ENST00000438008 GADL1Q6ZQY3 521 aa21.38■■□□□ 1.01
NCSTN-208ENST00000438008 AMOTL1Q8IY63 956 aa21.38■■□□□ 1.01
NCSTN-208ENST00000438008 PARK7Q99497 189 aaKnown RBP21.38■■□□□ 1.01
NCSTN-208ENST00000438008 AGTPBP1Q9UPW5 1226 aa21.38■■□□□ 1.01
NCSTN-208ENST00000438008 ADGRA2Q96PE1 1338 aa21.37■■□□□ 1.01
NCSTN-208ENST00000438008 BACE1P56817 501 aa21.37■■□□□ 1.01
NCSTN-208ENST00000438008 ABCB5Q2M3G0 1257 aa21.37■■□□□ 1.01
NCSTN-208ENST00000438008 SBK1Q52WX2 424 aa21.37■■□□□ 1.01
NCSTN-208ENST00000438008 CTR9Q6PD62 1173 aa21.37■■□□□ 1.01
NCSTN-208ENST00000438008 C17orf99Q6UX52 265 aa21.37■■□□□ 1.01
NCSTN-208ENST00000438008 ARPP21Q9UBL0 812 aaPredicted RBP21.37■■□□□ 1.01
NCSTN-208ENST00000438008 ATAD5Q96QE3 1844 aa21.36■■□□□ 1.01
NCSTN-208ENST00000438008 C19orf81C9J6K1 198 aa21.36■■□□□ 1.01
NCSTN-208ENST00000438008 HMGCS2P54868 508 aa21.36■■□□□ 1.01
NCSTN-208ENST00000438008 SEC62Q99442 399 aaKnown RBP21.36■■□□□ 1.01
NCSTN-208ENST00000438008 CABP5Q9NP86 173 aa21.36■■□□□ 1.01
NCSTN-208ENST00000438008 CYP2D7A0A087X1C5 515 aa21.35■■□□□ 1.01
NCSTN-208ENST00000438008 PATL2C9JE40 543 aaKnown RBP21.35■■□□□ 1.01
NCSTN-208ENST00000438008 USP17L10C9JJH3 530 aa21.35■■□□□ 1.01
NCSTN-208ENST00000438008 MTMR2Q13614 643 aa21.35■■□□□ 1.01
NCSTN-208ENST00000438008 CD99L2Q8TCZ2 262 aa21.35■■□□□ 1.01
NCSTN-208ENST00000438008 DYNLL2Q96FJ2 89 aa21.35■■□□□ 1.01
NCSTN-208ENST00000438008 PTPRFP10586 1907 aa21.34■■□□□ 1.01
NCSTN-208ENST00000438008 CYP2C8P10632 490 aa21.34■■□□□ 1.01
NCSTN-208ENST00000438008 GUCY1A2P33402 732 aa21.34■■□□□ 1.01
NCSTN-208ENST00000438008 TREML2Q5T2D2 321 aa21.34■■□□□ 1.01
NCSTN-208ENST00000438008 C16orf86Q6ZW13 317 aa21.34■■□□□ 1.01
NCSTN-208ENST00000438008 SLC44A5Q8NCS7 719 aa21.34■■□□□ 1.01
NCSTN-208ENST00000438008 SMIM22K7EJ46 135 aa21.33■■□□□ 1.01
NCSTN-208ENST00000438008 CDK8P49336 464 aa21.33■■□□□ 1.01
NCSTN-208ENST00000438008 PABPC4Q13310 644 aaKnown RBP eCLIP21.33■■□□□ 1.01
NCSTN-208ENST00000438008 RAB3GAP1Q15042 981 aa21.33■■□□□ 1.01
NCSTN-208ENST00000438008 ARHGEF6Q15052 776 aa21.33■■□□□ 1.01
NCSTN-208ENST00000438008 OTOP1Q7RTM1 612 aa21.33■■□□□ 1.01
NCSTN-208ENST00000438008 CCDC17Q96LX7 622 aa21.33■■□□□ 1.01
NCSTN-208ENST00000438008 EPB41L4AQ9HCS5 686 aaPredicted RBP21.33■■□□□ 1.01
NCSTN-208ENST00000438008 HELLSQ9NRZ9 838 aa21.33■■□□□ 1.01
NCSTN-208ENST00000438008 TMOD4Q9NZQ9 345 aa21.33■■□□□ 1.01
NCSTN-208ENST00000438008 CPA4Q9UI42 421 aa21.33■■□□□ 1.01
NCSTN-208ENST00000438008 PNMA3Q9UL41 463 aa21.33■■□□□ 1.01
NCSTN-208ENST00000438008 TRIM6-TRIM34B2RNG4 842 aa21.32■■□□□ 1
NCSTN-208ENST00000438008 BCRP11274 1271 aa21.32■■□□□ 1
NCSTN-208ENST00000438008 CAP1Q01518 475 aa21.32■■□□□ 1
NCSTN-208ENST00000438008 FBXO46Q6PJ61 603 aaPredicted RBP21.32■■□□□ 1
NCSTN-208ENST00000438008 IFNL3Q8IZI9 196 aa21.32■■□□□ 1
NCSTN-208ENST00000438008 EFCC1Q9HA90 598 aa21.32■■□□□ 1
NCSTN-208ENST00000438008 TRIM17Q9Y577 477 aa21.32■■□□□ 1
NCSTN-208ENST00000438008 HOXA7P31268 230 aaPredicted RBP21.31■■□□□ 1
NCSTN-208ENST00000438008 LACTBP83111 547 aaPredicted RBP21.31■■□□□ 1
NCSTN-208ENST00000438008 SEPT2Q15019 361 aa21.31■■□□□ 1
NCSTN-208ENST00000438008 USP17L2Q6R6M4 530 aa21.31■■□□□ 1
NCSTN-208ENST00000438008 TMEM179Q6ZVK1 233 aa21.31■■□□□ 1
NCSTN-208ENST00000438008 C12orf42Q96LP6 360 aa21.31■■□□□ 1
NCSTN-208ENST00000438008 NACAP1Q9BZK3 213 aa21.31■■□□□ 1
NCSTN-208ENST00000438008 KIAA1683Q9H0B3 1180 aa21.31■■□□□ 1
NCSTN-208ENST00000438008 EMILIN3Q9NT22 766 aa21.31■■□□□ 1
NCSTN-208ENST00000438008 LOC285556D6RIA3 1793 aa21.31■■□□□ 1
NCSTN-208ENST00000438008 BAZ2AQ9UIF9 1905 aaKnown RBP21.3■■□□□ 1
NCSTN-208ENST00000438008 APPP05067 770 aa21.3■■□□□ 1
NCSTN-208ENST00000438008 OSBPP22059 807 aa21.3■■□□□ 1
NCSTN-208ENST00000438008 PDE4AP27815 886 aa21.3■■□□□ 1
NCSTN-208ENST00000438008 TDO2P48775 406 aa21.3■■□□□ 1
NCSTN-208ENST00000438008 KIF22Q14807 665 aa21.3■■□□□ 1
NCSTN-208ENST00000438008 ROBO3Q96MS0 1386 aa21.3■■□□□ 1
NCSTN-208ENST00000438008 MINDY4BA8MYZ0 360 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms