RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 WDR43Q15061 677 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 CCDC85BQ15834 202 aaPredicted RBP15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 TRIM60Q495X7 471 aa15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 MORN1Q5T089 497 aa15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 GJC2Q5T442 439 aaPredicted RBP15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 BEND3Q5T5X7 828 aa15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 SLC39A5Q6ZMH5 540 aa15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 VGLL2Q8N8G2 317 aa15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 P2RX7Q99572 595 aaKnown RBP15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 PORCNQ9H237 461 aa15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 ARIH1Q9Y4X5 557 aaPredicted RBP15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 DNM1LO00429 736 aa15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 RGS2P41220 211 aa15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 CALD1Q05682 793 aaKnown RBP15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 METTL24Q5JXM2 366 aa15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 ZNF280CQ8ND82 737 aa15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 SNX27Q96L92 541 aa15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 IDI2Q9BXS1 227 aa15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 EPHX3Q9H6B9 360 aa15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 DDX4Q9NQI0 724 aaKnown RBP15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 DDX20Q9UHI6 824 aaKnown RBP15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 HCN4Q9Y3Q4 1203 aa15.5■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 TCF20Q9UGU0 1960 aaKnown RBP15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 GRM8O00222 908 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 ENTPD3O75355 529 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 PDE8BO95263 885 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 CNGA1P29973 690 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 PABPC4Q13310 644 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 RRP1BQ14684 758 aaKnown RBP15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 TWISTNBQ3B726 338 aaPredicted RBP15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 GPR142Q7Z601 462 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 GPRC5AQ8NFJ5 357 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 LPAR1Q92633 364 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 KAZALD1Q96I82 304 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 APBA2Q99767 749 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 PRDM12Q9H4Q4 367 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 RBPJLQ9UBG7 517 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 RLFQ13129 1914 aa15.49■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 ADGRE1Q14246 886 aa15.48■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 TRPV1Q8NER1 839 aa15.48■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 WDR66Q8TBY9 1149 aa15.48■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 SUCLG2Q96I99 432 aa15.48■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 NDUFB9Q9Y6M9 179 aa15.48■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 MUC6Q6W4X9 2439 aa15.48■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 XIRP2A4UGR9 3374 aa15.48■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 RFX7Q2KHR2 1363 aa15.48■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 MAPK4P31152 587 aa15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 PICALMQ13492 652 aa15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 SH3D19Q5HYK7 790 aa15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 AKNAD1Q5T1N1 836 aa15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 PLEKHH3Q7Z736 793 aa15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 IL27Q8NEV9 243 aa15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 TIFAQ96CG3 184 aa15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 GAS2L1Q99501 681 aaPredicted RBP15.47■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 MAP3K13O43283 966 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 PPP1R37O75864 691 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 BMP1P13497 986 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 FGFR2P21802 821 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 HERVK_113P62684 666 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 RALBP1Q15311 655 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 ANO1Q5XXA6 986 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 EFCAB3Q8N7B9 438 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 FBXO22Q8NEZ5 403 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 KLHDC4Q8TBB5 520 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 KIF12Q96FN5 646 aa15.46■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 LDHBP07195 334 aaKnown RBP15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 CYP2C19P33261 490 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 PBX2P40425 430 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 ERVK-9P63128 1117 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 ERVK-24P63145 666 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 MAP2K5Q13163 448 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 SNX17Q15036 470 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 MFSD14CQ5VZR4 134 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 FERMT2Q96AC1 680 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 EDC3Q96F86 508 aaKnown RBP15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 PAGR1Q9BTK6 254 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 MYO9BQ13459 2157 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 CHD9Q3L8U1 2897 aa15.45■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 GRXCR1A8MXD5 290 aa15.44■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 TFF2Q03403 129 aa15.44■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 TLE2Q04725 743 aa15.44■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 CCAR1Q8IX12 1150 aaKnown RBP15.44■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 C9orf78Q9NZ63 289 aaPredicted RBP15.44■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 UTYO14607 1347 aa15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 USP17L5A8MUK1 530 aa15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 TBC1D12O60347 775 aa15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 MSCO60682 206 aa15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 IFIT1P09914 478 aaKnown RBP15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 IGFBP4P22692 258 aa15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 HOXA7P31268 230 aaPredicted RBP15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 ADCYAP1R1P41586 468 aa15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 MTMR2Q13614 643 aa15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 OSBPL5Q9H0X9 879 aaPredicted RBP15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 REV3LO60673 3130 aa15.43■□□□□ 0.06
SMAD9-IT1-201ENST00000437983 KIF16BQ96L93 1317 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms