RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 HOOK2Q96ED9 719 aa19.87■□□□□ 0.77
CALD1-209ENST00000436461 RNF41Q9H4P4 317 aaPredicted RBP19.87■□□□□ 0.77
CALD1-209ENST00000436461 DOCK1Q14185 1865 aa19.87■□□□□ 0.77
CALD1-209ENST00000436461 UBE2Q2LH0YL09 131 aa19.87■□□□□ 0.77
CALD1-209ENST00000436461 MPHOSPH10O00566 681 aaKnown RBP19.87■□□□□ 0.77
CALD1-209ENST00000436461 CHST3Q7LGC8 479 aa19.87■□□□□ 0.77
CALD1-209ENST00000436461 ORC4O43929 436 aa19.86■□□□□ 0.77
CALD1-209ENST00000436461 KDM4AO75164 1064 aa19.86■□□□□ 0.77
CALD1-209ENST00000436461 CCDC84Q86UT8 332 aaPredicted RBP19.86■□□□□ 0.77
CALD1-209ENST00000436461 CLEC10AQ8IUN9 316 aa19.86■□□□□ 0.77
CALD1-209ENST00000436461 ZNF444Q8N0Y2 327 aaPredicted RBP19.86■□□□□ 0.77
CALD1-209ENST00000436461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.86■□□□□ 0.77
CALD1-209ENST00000436461 JAKMIP1Q96N16 626 aaKnown RBP19.86■□□□□ 0.77
CALD1-209ENST00000436461 GBA2Q9HCG7 927 aaPredicted RBP19.86■□□□□ 0.77
CALD1-209ENST00000436461 TFAP4Q01664 338 aa19.85■□□□□ 0.77
CALD1-209ENST00000436461 TSGA10IPQ3SY00 556 aa19.85■□□□□ 0.77
CALD1-209ENST00000436461 CYB5R4Q7L1T6 521 aa19.85■□□□□ 0.77
CALD1-209ENST00000436461 NCOA7Q8NI08 942 aa19.85■□□□□ 0.77
CALD1-209ENST00000436461 TCEANC2Q96MN5 208 aa19.85■□□□□ 0.77
CALD1-209ENST00000436461 TBC1D32Q96NH3 1257 aa19.85■□□□□ 0.77
CALD1-209ENST00000436461 ZKSCAN3Q9BRR0 538 aa19.85■□□□□ 0.77
CALD1-209ENST00000436461 ZNF112Q9UJU3 913 aa19.85■□□□□ 0.77
CALD1-209ENST00000436461 GREB1LQ9C091 1923 aaPredicted RBP19.85■□□□□ 0.77
CALD1-209ENST00000436461 TSPY2A6NKD2 308 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 NMT2O60551 498 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 GH2P01242 217 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 TSPY3P0CV98 308 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 TSPY8P0CW00 308 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 CAP2P40123 477 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 RBM25P49756 843 aaKnown RBP19.84■□□□□ 0.77
CALD1-209ENST00000436461 FSTL1Q12841 308 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 TRDNQ13061 729 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.84■□□□□ 0.77
CALD1-209ENST00000436461 RALYLQ86SE5 291 aaKnown RBP19.84■□□□□ 0.77
CALD1-209ENST00000436461 CLMNQ96JQ2 1002 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 NEK1Q96PY6 1258 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.84■□□□□ 0.77
CALD1-209ENST00000436461 ZNF287Q9HBT7 754 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 ZSWIM5Q9P217 1185 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 IREB2P48200 963 aaKnown RBP19.84■□□□□ 0.77
CALD1-209ENST00000436461 VGLL4Q14135 290 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 ABCB5Q2M3G0 1257 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 ARMC9Q7Z3E5 817 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 MB21D2Q8IYB1 491 aaPredicted RBP19.84■□□□□ 0.77
CALD1-209ENST00000436461 KIF2CQ99661 725 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 KRT23Q9C075 422 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 CNNM2Q9H8M5 875 aa19.84■□□□□ 0.77
CALD1-209ENST00000436461 PCP11498 1178 aaKnown RBP19.83■□□□□ 0.76
CALD1-209ENST00000436461 CASTP20810 708 aaKnown RBP19.83■□□□□ 0.76
CALD1-209ENST00000436461 GUCY1A2P33402 732 aa19.83■□□□□ 0.76
CALD1-209ENST00000436461 ANTXR2P58335 489 aa19.83■□□□□ 0.76
CALD1-209ENST00000436461 MAP3K9P80192 1104 aa19.83■□□□□ 0.76
CALD1-209ENST00000436461 RAB3GAP1Q15042 981 aa19.83■□□□□ 0.76
CALD1-209ENST00000436461 C2orf69Q8N8R5 385 aa19.83■□□□□ 0.76
CALD1-209ENST00000436461 ESR2Q92731 530 aa19.83■□□□□ 0.76
CALD1-209ENST00000436461 LRRC2Q9BYS8 371 aa19.83■□□□□ 0.76
CALD1-209ENST00000436461 UPF3BQ9BZI7 483 aaKnown RBP19.83■□□□□ 0.76
CALD1-209ENST00000436461 ZBTB21Q9ULJ3 1066 aa19.83■□□□□ 0.76
CALD1-209ENST00000436461 KRT32Q14532 448 aa19.82■□□□□ 0.76
CALD1-209ENST00000436461 SEPT2Q15019 361 aa19.82■□□□□ 0.76
CALD1-209ENST00000436461 MAP3K11Q16584 847 aa19.82■□□□□ 0.76
CALD1-209ENST00000436461 CNKSR2Q8WXI2 1034 aa19.82■□□□□ 0.76
CALD1-209ENST00000436461 CTNND1O60716 968 aaKnown RBP19.81■□□□□ 0.76
CALD1-209ENST00000436461 ANAPC15P60006 121 aa19.81■□□□□ 0.76
CALD1-209ENST00000436461 SCYL3Q8IZE3 742 aa19.81■□□□□ 0.76
CALD1-209ENST00000436461 ELP3Q9H9T3 547 aa19.81■□□□□ 0.76
CALD1-209ENST00000436461 IL17RBQ9NRM6 502 aa19.81■□□□□ 0.76
CALD1-209ENST00000436461 SNCAIPQ9Y6H5 919 aa19.81■□□□□ 0.76
CALD1-209ENST00000436461 PHIPQ8WWQ0 1821 aa19.81■□□□□ 0.76
CALD1-209ENST00000436461 MYH4Q9Y623 1939 aa19.81■□□□□ 0.76
CALD1-209ENST00000436461 ANKRD13AQ8IZ07 590 aa19.8■□□□□ 0.76
CALD1-209ENST00000436461 NEDD1Q8NHV4 660 aa19.8■□□□□ 0.76
CALD1-209ENST00000436461 CEP95Q96GE4 821 aa19.8■□□□□ 0.76
CALD1-209ENST00000436461 CCDC17Q96LX7 622 aa19.8■□□□□ 0.76
CALD1-209ENST00000436461 CABP5Q9NP86 173 aa19.8■□□□□ 0.76
CALD1-209ENST00000436461 GPHNQ9NQX3 736 aaPredicted RBP19.8■□□□□ 0.76
CALD1-209ENST00000436461 CSADQ9Y600 493 aa19.8■□□□□ 0.76
CALD1-209ENST00000436461 LDLRAD1Q5T700 205 aa19.8■□□□□ 0.76
CALD1-209ENST00000436461 BLOC1S2Q6QNY1 142 aa19.8■□□□□ 0.76
CALD1-209ENST00000436461 TMEM179Q6ZVK1 233 aa19.8■□□□□ 0.76
CALD1-209ENST00000436461 TAOK2Q9UL54 1235 aa19.8■□□□□ 0.76
CALD1-209ENST00000436461 PLIN4Q96Q06 1357 aa19.79■□□□□ 0.76
CALD1-209ENST00000436461 PRC1O43663 620 aa19.79■□□□□ 0.76
CALD1-209ENST00000436461 ASNSP08243 561 aa19.79■□□□□ 0.76
CALD1-209ENST00000436461 HUNKP57058 714 aa19.79■□□□□ 0.76
CALD1-209ENST00000436461 ZSWIM6Q9HCJ5 1215 aa19.79■□□□□ 0.76
CALD1-209ENST00000436461 IGKV6D-41A0A0C4DH26 115 aa19.78■□□□□ 0.76
CALD1-209ENST00000436461 RPS6KB1P23443 525 aa19.78■□□□□ 0.76
CALD1-209ENST00000436461 PSMA5P28066 241 aa19.78■□□□□ 0.76
CALD1-209ENST00000436461 MCM5P33992 734 aa19.78■□□□□ 0.76
CALD1-209ENST00000436461 FKBP1BP68106 108 aa19.78■□□□□ 0.76
CALD1-209ENST00000436461 ATP2B2Q01814 1243 aa19.78■□□□□ 0.76
CALD1-209ENST00000436461 NOL9Q5SY16 702 aaKnown RBP19.78■□□□□ 0.76
CALD1-209ENST00000436461 DHX32Q7L7V1 743 aaKnown RBP19.78■□□□□ 0.76
CALD1-209ENST00000436461 SENP2Q9HC62 589 aa19.78■□□□□ 0.76
CALD1-209ENST00000436461 PICK1Q9NRD5 415 aa19.78■□□□□ 0.76
CALD1-209ENST00000436461 TNKSO95271 1327 aa19.77■□□□□ 0.76
CALD1-209ENST00000436461 TMEM88BA6NKF7 163 aa19.77■□□□□ 0.76
CALD1-209ENST00000436461 PTPRAP18433 802 aa19.77■□□□□ 0.76
CALD1-209ENST00000436461 RUFY3Q7L099 469 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms