RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CENPFP49454 3210 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 PNMA6EA0A0J9YXQ4 647 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 FAM196BA6NMK8 535 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 BCAR3O75815 825 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 BCRP11274 1271 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 CCL5P13501 91 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 ARID4AP29374 1257 aaPredicted RBP9.5□□□□□ -0.89
VPS50-203ENST00000436177 RHBDL3P58872 404 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 HNRNPUQ00839 825 aaKnown RBP eCLIP9.5□□□□□ -0.89
VPS50-203ENST00000436177 MOGSQ13724 837 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 HABP4Q5JVS0 413 aaKnown RBP9.5□□□□□ -0.89
VPS50-203ENST00000436177 GPAT2Q6NUI2 795 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 SH3BP5LQ7L8J4 393 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 ITPRIPQ8IWB1 547 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 CRACR2BQ8N4Y2 399 aaPredicted RBP9.5□□□□□ -0.89
VPS50-203ENST00000436177 NSUN4Q96CB9 384 aaKnown RBP9.5□□□□□ -0.89
VPS50-203ENST00000436177 HTATIP2Q9BUP3 242 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 TBC1D2Q9BYX2 928 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 OSBPL5Q9H0X9 879 aaPredicted RBP9.5□□□□□ -0.89
VPS50-203ENST00000436177 AS3MTQ9HBK9 375 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 HERC5Q9UII4 1024 aaKnown RBP9.5□□□□□ -0.89
VPS50-203ENST00000436177 AGTPBP1Q9UPW5 1226 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 AFG3L2Q9Y4W6 797 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 TRIOBPQ9H2D6 2365 aa9.5□□□□□ -0.89
VPS50-203ENST00000436177 COL2A1P02458 1487 aaPredicted RBP9.49□□□□□ -0.89
VPS50-203ENST00000436177 ADCY3O60266 1144 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 TBC1D12O60347 775 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 SURF6O75683 361 aaKnown RBP9.49□□□□□ -0.89
VPS50-203ENST00000436177 HLA-DOAP06340 250 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 GJB1P08034 283 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 PBX2P40425 430 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 MCAMP43121 646 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 GCLCP48506 637 aaPredicted RBP9.49□□□□□ -0.89
VPS50-203ENST00000436177 IRX3P78415 501 aaPredicted RBP9.49□□□□□ -0.89
VPS50-203ENST00000436177 SPP2Q13103 211 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 MTFR1Q15390 333 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 TNNI3KQ59H18 835 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 TMEM57Q8N5G2 664 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 PROCA1Q8NCQ7 364 aaPredicted RBP9.49□□□□□ -0.89
VPS50-203ENST00000436177 ZNF280CQ8ND82 737 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 DPF3Q92784 378 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 DHX36Q9H2U1 1008 aaKnown RBP9.49□□□□□ -0.89
VPS50-203ENST00000436177 SNRKQ9NRH2 765 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 TMOD4Q9NZQ9 345 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 FPGT-TNNI3KV9GXZ4 949 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 DOCK2Q92608 1830 aa9.49□□□□□ -0.89
VPS50-203ENST00000436177 MKI67P46013 3256 aaKnown RBP9.48□□□□□ -0.89
VPS50-203ENST00000436177 RBBP6Q7Z6E9 1792 aaKnown RBP9.48□□□□□ -0.89
VPS50-203ENST00000436177 USP17L5A8MUK1 530 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 FARP2O94887 1054 aaPredicted RBP9.48□□□□□ -0.89
VPS50-203ENST00000436177 ASNSP08243 561 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 CTGFP29279 349 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 CAP2P40123 477 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 FLT3LGP49771 235 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 HMGCS2P54868 508 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 MAP3K10Q02779 954 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 CCDC84Q86UT8 332 aaPredicted RBP9.48□□□□□ -0.89
VPS50-203ENST00000436177 CCAR1Q8IX12 1150 aaKnown RBP9.48□□□□□ -0.89
VPS50-203ENST00000436177 ANKRD13CQ8N6S4 541 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 SH3RF3Q8TEJ3 882 aaPredicted RBP9.48□□□□□ -0.89
VPS50-203ENST00000436177 GPR108Q9NPR9 543 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 AATFQ9NY61 560 aaKnown RBP eCLIP9.48□□□□□ -0.89
VPS50-203ENST00000436177 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.48□□□□□ -0.89
VPS50-203ENST00000436177 PI4KBQ9UBF8 816 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 NR2E3Q9Y5X4 410 aa9.48□□□□□ -0.89
VPS50-203ENST00000436177 H0YGN5 161 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 IDH1O75874 414 aaKnown RBP9.47□□□□□ -0.89
VPS50-203ENST00000436177 INHAP05111 366 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 ELNP15502 786 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 GJA8P48165 433 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 FAM110CQ1W6H9 321 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 TREML2Q5T2D2 321 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 CERS3Q8IU89 383 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 MAPKAPK5Q8IW41 473 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 U2AF1L4Q8WU68 220 aaKnown RBP9.47□□□□□ -0.89
VPS50-203ENST00000436177 DBNDD2Q9BQY9 259 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 CWC22Q9HCG8 908 aaKnown RBP9.47□□□□□ -0.89
VPS50-203ENST00000436177 TNNQ9UQP3 1299 aa9.47□□□□□ -0.89
VPS50-203ENST00000436177 MYH2Q9UKX2 1941 aa9.46□□□□□ -0.89
VPS50-203ENST00000436177 IGSF3O75054 1194 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 TFRCP02786 760 aaKnown RBP9.46□□□□□ -0.9
VPS50-203ENST00000436177 SLURP2P0DP57 97 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 CAPN2P17655 700 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 CYP7A1P22680 504 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 IRF5Q13568 498 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 MTMR2Q13614 643 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 ERC1Q8IUD2 1116 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 SSH3Q8TE77 659 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 PXYLP1Q8TE99 480 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 ZNF384Q8TF68 577 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 TGFBRAP1Q8WUH2 860 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 SHISA4Q96DD7 197 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 FEZ1Q99689 392 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 UNC93B1Q9H1C4 597 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 GABRQQ9UN88 632 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.46□□□□□ -0.9
VPS50-203ENST00000436177 FLT1P17948 1338 aa9.46□□□□□ -0.9
VPS50-203ENST00000436177 DOCK1Q14185 1865 aa9.45□□□□□ -0.9
VPS50-203ENST00000436177 ZAP70P43403 619 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms