RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 GUCA1BQ9UMX6 200 aa11.86□□□□□ -0.51
LDLRAD4-204ENST00000435606 MRPL11Q9Y3B7 192 aaKnown RBP11.86□□□□□ -0.51
LDLRAD4-204ENST00000435606 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
LDLRAD4-204ENST00000435606 PLXNC1O60486 1568 aa11.86□□□□□ -0.51
LDLRAD4-204ENST00000435606 GCNT3O95395 438 aa11.86□□□□□ -0.51
LDLRAD4-204ENST00000435606 TMOD1P28289 359 aa11.86□□□□□ -0.51
LDLRAD4-204ENST00000435606 DCUN1D2Q6PH85 259 aa11.86□□□□□ -0.51
LDLRAD4-204ENST00000435606 MAEAQ7L5Y9 396 aa11.86□□□□□ -0.51
LDLRAD4-204ENST00000435606 DNAJC25Q9H1X3 360 aa11.86□□□□□ -0.51
LDLRAD4-204ENST00000435606 H0YCG3 227 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 VIMP08670 466 aaKnown RBP11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 VAV2P52735 878 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 YARSP54577 528 aaKnown RBP11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 CTSWP56202 376 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 ADPGKQ9BRR6 497 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 SNX29Q8TEQ0 813 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 GAS7O60861 476 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 A1BGP04217 495 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 OSBPP22059 807 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 MED10Q9BTT4 135 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 FAM196AQ6ZSG2 479 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 DNAI1Q9UI46 699 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 AOX1Q06278 1338 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 TTC38Q5R3I4 469 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 SND1Q7KZF4 910 aaKnown RBP eCLIP11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 NT5C3AQ9H0P0 336 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 ZFYVE16Q7Z3T8 1539 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 TAOK1Q7L7X3 1001 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 VPS52Q8N1B4 723 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 CALCOCO1Q9P1Z2 691 aa11.85□□□□□ -0.51
LDLRAD4-204ENST00000435606 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 CDC37L1Q7L3B6 337 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 NUP58Q9BVL2 599 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 PPANQ9NQ55 473 aaKnown RBP11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 OATP04181 439 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 INTS4Q96HW7 963 aaKnown RBP11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 PPP1R9BQ96SB3 815 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 LRWD1Q9UFC0 647 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 CHMLP26374 656 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 TYRO3Q06418 890 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 DNAJC10Q8IXB1 793 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 REXO1Q8N1G1 1221 aaKnown RBP11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 ANKRD35Q8N283 1001 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 RSPH3Q86UC2 560 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 MIER3Q7Z3K6 550 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 ZNF594Q96JF6 807 aaPredicted RBP11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 EXOC3O60645 756 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 TBC1D8BQ0IIM8 1120 aa11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 UAP1Q16222 522 aaPredicted RBP11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 ZNF277Q9NRM2 450 aaPredicted RBP11.84□□□□□ -0.51
LDLRAD4-204ENST00000435606 ACTN4O43707 911 aaKnown RBP11.83□□□□□ -0.51
LDLRAD4-204ENST00000435606 NCAPG2Q86XI2 1143 aa11.83□□□□□ -0.51
LDLRAD4-204ENST00000435606 SNX21Q969T3 373 aa11.83□□□□□ -0.51
LDLRAD4-204ENST00000435606 KCNK9Q9NPC2 374 aa11.83□□□□□ -0.51
LDLRAD4-204ENST00000435606 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 AKR1B15C9JRZ8 316 aaPredicted RBP11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 TUBBP07437 444 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 DAAM2Q86T65 1068 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 CAPZA3Q96KX2 299 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 CBX1P83916 185 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 ZNF365Q70YC5 407 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 PRIMPOLQ96LW4 560 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 ANO3Q9BYT9 981 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 IVLP07476 585 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 FAM160B1Q5W0V3 765 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 ARMC9Q7Z3E5 817 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 FNBP4Q8N3X1 1017 aaPredicted RBP11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 RNF169Q8NCN4 708 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 ATP8A2Q9NTI2 1148 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 SUPT20HL1Q3ZLR7 823 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 ZNF532Q9HCE3 1301 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 CD19P15391 556 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 CERKLQ49MI3 558 aaPredicted RBP11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 HERC4Q5GLZ8 1057 aaPredicted RBP11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 NKIRAS1Q9NYS0 192 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 NOL3O60936 208 aaKnown RBP11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 POLR2MP0CAP2 368 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 TNNI1P19237 187 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 KRT26Q7Z3Y9 468 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 TMC4Q7Z404 712 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 DPP9Q86TI2 863 aa11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 IPO4Q8TEX9 1081 aaKnown RBP11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 UTP11Q9Y3A2 253 aaKnown RBP11.83□□□□□ -0.52
LDLRAD4-204ENST00000435606 DYNC1I1O14576 645 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 GNA14O95837 355 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 MYL5Q02045 173 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 SETDB1Q15047 1291 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 SLFN12Q8IYM2 578 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 ABI1Q8IZP0 508 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 IFT81Q8WYA0 676 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 UTP14CQ5TAP6 766 aaKnown RBP11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 AP5M1Q9H0R1 490 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 TSPOAP1O95153 1857 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 CUTAO60888 179 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 TNNC2P02585 160 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 TFAP4Q01664 338 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 PLCB4Q15147 1175 aa11.82□□□□□ -0.52
LDLRAD4-204ENST00000435606 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms