RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 CCDC93Q567U6 631 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 INTS6LQ5JSJ4 861 aaKnown RBP7.16□□□□□ -1.26
VRK2-206ENST00000435505 SYT10Q6XYQ8 523 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 EGFL6Q8IUX8 553 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 COG1Q8WTW3 980 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 NBPF3Q9H094 633 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 ZFYVE28Q9HCC9 887 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 FAM50BQ9Y247 325 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 IPPQ9Y573 584 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 CEP83Q9Y592 693 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 KDM5DQ9BY66 1539 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 ARHGEF12Q9NZN5 1544 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 MICAL2O94851 1124 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 CELA3AP09093 270 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 MMP16P51512 607 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 GPSM2P81274 684 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 CAMK2GQ13555 558 aaPredicted RBP7.16□□□□□ -1.26
VRK2-206ENST00000435505 NXNQ6DKJ4 435 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 HDGFL2Q7Z4V5 671 aaPredicted RBP7.16□□□□□ -1.26
VRK2-206ENST00000435505 SLITRK4Q8IW52 837 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 C10orf67Q8IYJ2 551 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 NEK11Q8NG66 645 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 PARD3BQ8TEW8 1205 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 JPH3Q8WXH2 748 aaPredicted RBP7.16□□□□□ -1.26
VRK2-206ENST00000435505 KCTD15Q96SI1 283 aaPredicted RBP7.16□□□□□ -1.26
VRK2-206ENST00000435505 LCMT1Q9UIC8 334 aa7.16□□□□□ -1.26
VRK2-206ENST00000435505 SAMD9Q5K651 1589 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 CEP170Q5SW79 1584 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 DISP3Q9P2K9 1392 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 SMTNL1A8MU46 457 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 GABRDO14764 452 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 ADCY3O60266 1144 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 REC8O95072 547 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 GUCY2CP25092 1073 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 CASQ1P31415 396 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 HALP42357 657 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 NUCB2P80303 420 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 TRIP4Q15650 581 aaPredicted RBP7.15□□□□□ -1.26
VRK2-206ENST00000435505 CNNM4Q6P4Q7 775 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 POTEAQ6S8J7 498 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 BPHLQ86WA6 291 aaPredicted RBP7.15□□□□□ -1.26
VRK2-206ENST00000435505 SEPT12Q8IYM1 358 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 SDR16C5Q8N3Y7 309 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 ZNF397Q8NF99 534 aaPredicted RBP7.15□□□□□ -1.26
VRK2-206ENST00000435505 CXorf38Q8TB03 319 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 USP33Q8TEY7 942 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 NOL10Q9BSC4 688 aaKnown RBP7.15□□□□□ -1.26
VRK2-206ENST00000435505 LRRC27Q9C0I9 530 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 LATS2Q9NRM7 1088 aa7.15□□□□□ -1.26
VRK2-206ENST00000435505 C9orf78Q9NZ63 289 aaPredicted RBP7.15□□□□□ -1.26
VRK2-206ENST00000435505 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.15□□□□□ -1.26
VRK2-206ENST00000435505 ANKRD36BQ8N2N9 1353 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 ZPR1O75312 459 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 CCDC172P0C7W6 258 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 SDSP20132 328 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 SMTNP53814 917 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 RBM6P78332 1123 aaKnown RBP7.15□□□□□ -1.27
VRK2-206ENST00000435505 EVX2Q03828 476 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 PWP1Q13610 501 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 MTFR1Q15390 333 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 FXNQ16595 210 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 SNAP47Q5SQN1 464 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 CTR9Q6PD62 1173 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 CCDC174Q6PII3 467 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 TEX19Q8NA77 164 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.15□□□□□ -1.27
VRK2-206ENST00000435505 CENPOQ9BU64 300 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 SRCIN1Q9C0H9 1055 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 SLC5A4Q9NY91 659 aa7.15□□□□□ -1.27
VRK2-206ENST00000435505 PUF60Q9UHX1 559 aaKnown RBP7.15□□□□□ -1.27
VRK2-206ENST00000435505 GRIN2BQ13224 1484 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 TNKSO95271 1327 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 EREGO14944 169 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 TRIM27P14373 513 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 PCSK2P16519 638 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 MUM1L1Q5H9M0 696 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 BNC2Q6ZN30 1099 aaPredicted RBP7.14□□□□□ -1.27
VRK2-206ENST00000435505 LEO1Q8WVC0 666 aaPredicted RBP7.14□□□□□ -1.27
VRK2-206ENST00000435505 CDC5LQ99459 802 aaKnown RBP7.14□□□□□ -1.27
VRK2-206ENST00000435505 BRMS1Q9HCU9 246 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 ATG3Q9NT62 314 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 ZDHHC9Q9Y397 364 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 GRIN2AQ12879 1464 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 TRPM1Q7Z4N2 1603 aa7.14□□□□□ -1.27
VRK2-206ENST00000435505 CFAP65Q6ZU64 1925 aaKnown RBP7.14□□□□□ -1.27
VRK2-206ENST00000435505 RASSF10A6NK89 507 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 MYO1CO00159 1063 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 PPP2R1AP30153 589 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 GEMIN4P57678 1058 aaKnown RBP7.13□□□□□ -1.27
VRK2-206ENST00000435505 GFOD2Q3B7J2 385 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 FBXO38Q6PIJ6 1188 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 SYNPOQ8N3V7 929 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 GTF3C6Q969F1 213 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 KIF1BPQ96EK5 621 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 C16orf45Q96MC5 204 aaPredicted RBP7.13□□□□□ -1.27
VRK2-206ENST00000435505 FERD3LQ96RJ6 166 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 SLC26A8Q96RN1 970 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 IP6K2Q9UHH9 426 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 TRHDEQ9UKU6 1024 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 HDAC9Q9UKV0 1011 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms