RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 CRACR2BQ8N4Y2 399 aaPredicted RBP27.22■■□□□ 1.95
HMG20B-205ENST00000435022 PXYLP1Q8TE99 480 aa27.22■■□□□ 1.95
HMG20B-205ENST00000435022 BIN2Q9UBW5 565 aaPredicted RBP27.22■■□□□ 1.95
HMG20B-205ENST00000435022 COG6Q9Y2V7 657 aa27.22■■□□□ 1.95
HMG20B-205ENST00000435022 UBXN2AP68543 259 aa27.21■■□□□ 1.95
HMG20B-205ENST00000435022 POTEEQ6S8J3 1075 aa27.21■■□□□ 1.95
HMG20B-205ENST00000435022 GCC1Q96CN9 775 aa27.21■■□□□ 1.95
HMG20B-205ENST00000435022 RIOK1Q9BRS2 568 aaKnown RBP27.21■■□□□ 1.95
HMG20B-205ENST00000435022 ZBTB40Q9NUA8 1239 aa27.21■■□□□ 1.95
HMG20B-205ENST00000435022 GCLCP48506 637 aaPredicted RBP27.2■■□□□ 1.94
HMG20B-205ENST00000435022 NAV1Q8NEY1 1877 aa27.2■■□□□ 1.94
HMG20B-205ENST00000435022 U2AF1L4Q8WU68 220 aaKnown RBP27.2■■□□□ 1.94
HMG20B-205ENST00000435022 TXNRD2Q9NNW7 524 aa27.2■■□□□ 1.94
HMG20B-205ENST00000435022 MORF4L1Q9UBU8 362 aa27.2■■□□□ 1.94
HMG20B-205ENST00000435022 HLA-DOAP06340 250 aa27.19■■□□□ 1.94
HMG20B-205ENST00000435022 HOXA7P31268 230 aaPredicted RBP27.19■■□□□ 1.94
HMG20B-205ENST00000435022 EVX2Q03828 476 aa27.19■■□□□ 1.94
HMG20B-205ENST00000435022 TATDN1Q6P1N9 297 aa27.19■■□□□ 1.94
HMG20B-205ENST00000435022 GJD2Q9UKL4 321 aa27.19■■□□□ 1.94
HMG20B-205ENST00000435022 H0YGN5 161 aa27.18■■□□□ 1.94
HMG20B-205ENST00000435022 APBB1O00213 710 aa27.18■■□□□ 1.94
HMG20B-205ENST00000435022 PABPC4Q13310 644 aaKnown RBP eCLIP27.18■■□□□ 1.943e-11■□□□□ 9.8
HMG20B-205ENST00000435022 NKX2-3Q8TAU0 364 aa27.18■■□□□ 1.94
HMG20B-205ENST00000435022 P2RX7Q99572 595 aaKnown RBP27.18■■□□□ 1.94
HMG20B-205ENST00000435022 CEP290O15078 2479 aa27.17■■□□□ 1.94
HMG20B-205ENST00000435022 USP17L10C9JJH3 530 aa27.17■■□□□ 1.94
HMG20B-205ENST00000435022 GH2P01242 217 aa27.17■■□□□ 1.94
HMG20B-205ENST00000435022 USP5P45974 858 aa27.17■■□□□ 1.94
HMG20B-205ENST00000435022 MAP3K12Q12852 859 aa27.17■■□□□ 1.94
HMG20B-205ENST00000435022 COA7Q96BR5 231 aa27.17■■□□□ 1.94
HMG20B-205ENST00000435022 EDC3Q96F86 508 aaKnown RBP27.17■■□□□ 1.94
HMG20B-205ENST00000435022 EMILIN3Q9NT22 766 aa27.17■■□□□ 1.94
HMG20B-205ENST00000435022 GINM1Q9NU53 330 aa27.17■■□□□ 1.94
HMG20B-205ENST00000435022 TRIM34Q9BYJ4 488 aa27.16■■□□□ 1.94
HMG20B-205ENST00000435022 EHD4Q9H223 541 aa27.16■■□□□ 1.94
HMG20B-205ENST00000435022 PAK6Q9NQU5 681 aaPredicted RBP27.16■■□□□ 1.94
HMG20B-205ENST00000435022 TAOK2Q9UL54 1235 aa27.16■■□□□ 1.94
HMG20B-205ENST00000435022 COLQQ9Y215 455 aaPredicted RBP27.16■■□□□ 1.94
HMG20B-205ENST00000435022 C19orf81C9J6K1 198 aa27.15■■□□□ 1.94
HMG20B-205ENST00000435022 SGPL1O95470 568 aa27.15■■□□□ 1.94
HMG20B-205ENST00000435022 PDE6AP16499 860 aa27.15■■□□□ 1.94
HMG20B-205ENST00000435022 PLCD1P51178 756 aa27.15■■□□□ 1.94
HMG20B-205ENST00000435022 HERVK_113P62684 666 aa27.15■■□□□ 1.94
HMG20B-205ENST00000435022 IRX3P78415 501 aaPredicted RBP27.15■■□□□ 1.94
HMG20B-205ENST00000435022 TRIM32Q13049 653 aa27.15■■□□□ 1.94
HMG20B-205ENST00000435022 HSP90AB4PQ58FF6 505 aa27.15■■□□□ 1.94
HMG20B-205ENST00000435022 RPAP2Q8IXW5 612 aaPredicted RBP27.15■■□□□ 1.94
HMG20B-205ENST00000435022 KIF1BPQ96EK5 621 aa27.15■■□□□ 1.94
HMG20B-205ENST00000435022 TMOD4Q9NZQ9 345 aa27.15■■□□□ 1.94
HMG20B-205ENST00000435022 DDX19BQ9UMR2 479 aa27.15■■□□□ 1.94
HMG20B-205ENST00000435022 TCRBV5S4A2TA0A5A2 114 aa27.14■■□□□ 1.94
HMG20B-205ENST00000435022 SHMT1P34896 483 aa27.14■■□□□ 1.94
HMG20B-205ENST00000435022 C20orf194Q5TEA3 1177 aa27.14■■□□□ 1.94
HMG20B-205ENST00000435022 CERS3Q8IU89 383 aa27.14■■□□□ 1.94
HMG20B-205ENST00000435022 RBPJLQ9UBG7 517 aa27.14■■□□□ 1.94
HMG20B-205ENST00000435022 SERPINB13Q9UIV8 391 aa27.14■■□□□ 1.94
HMG20B-205ENST00000435022 SLFNL1Q499Z3 407 aa27.13■■□□□ 1.93
HMG20B-205ENST00000435022 TMED8Q6PL24 325 aaPredicted RBP27.13■■□□□ 1.93
HMG20B-205ENST00000435022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.13■■□□□ 1.93
HMG20B-205ENST00000435022 DEFB118Q96PH6 123 aa27.13■■□□□ 1.93
HMG20B-205ENST00000435022 ALPK3Q96L96 1907 aa27.12■■□□□ 1.93
HMG20B-205ENST00000435022 GOLIM4O00461 696 aa27.12■■□□□ 1.93
HMG20B-205ENST00000435022 FARP2O94887 1054 aaPredicted RBP27.12■■□□□ 1.93
HMG20B-205ENST00000435022 MS4A1P11836 297 aa27.12■■□□□ 1.93
HMG20B-205ENST00000435022 GUCY1A2P33402 732 aa27.12■■□□□ 1.93
HMG20B-205ENST00000435022 GABPAQ06546 454 aa27.12■■□□□ 1.93
HMG20B-205ENST00000435022 Q3C1V9 767 aa27.12■■□□□ 1.93
HMG20B-205ENST00000435022 CLASRPQ8N2M8 674 aaKnown RBP27.12■■□□□ 1.93
HMG20B-205ENST00000435022 C12orf42Q96LP6 360 aa27.12■■□□□ 1.93
HMG20B-205ENST00000435022 CRISPLD2Q9H0B8 497 aa27.12■■□□□ 1.93
HMG20B-205ENST00000435022 ZNF532Q9HCE3 1301 aa27.12■■□□□ 1.93
HMG20B-205ENST00000435022 MAGEB6P1A0A0J9YX57 407 aa27.11■■□□□ 1.93
HMG20B-205ENST00000435022 FXR1P51114 621 aaKnown RBP eCLIP27.11■■□□□ 1.93
HMG20B-205ENST00000435022 SLC9C2Q5TAH2 1124 aa27.11■■□□□ 1.93
HMG20B-205ENST00000435022 ACER1Q8TDN7 264 aa27.11■■□□□ 1.93
HMG20B-205ENST00000435022 DNAJC2Q99543 621 aaKnown RBP27.11■■□□□ 1.93
HMG20B-205ENST00000435022 RCAN3Q9UKA8 241 aa27.11■■□□□ 1.93
HMG20B-205ENST00000435022 CHGBP05060 677 aa27.1■■□□□ 1.93
HMG20B-205ENST00000435022 TTF1Q15361 905 aaPredicted RBP27.1■■□□□ 1.93
HMG20B-205ENST00000435022 ZYXQ15942 572 aaKnown RBP27.1■■□□□ 1.93
HMG20B-205ENST00000435022 USP17L2Q6R6M4 530 aa27.1■■□□□ 1.93
HMG20B-205ENST00000435022 LCORLQ8N3X6 602 aa27.1■■□□□ 1.93
HMG20B-205ENST00000435022 TRIB2Q92519 343 aa27.1■■□□□ 1.93
HMG20B-205ENST00000435022 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.1■■□□□ 1.93
HMG20B-205ENST00000435022 PORCNQ9H237 461 aa27.1■■□□□ 1.93
HMG20B-205ENST00000435022 HMGCRP04035 888 aa27.09■■□□□ 1.93
HMG20B-205ENST00000435022 TTC6Q86TZ1 520 aa27.09■■□□□ 1.93
HMG20B-205ENST00000435022 HMMRO75330 724 aa27.08■■□□□ 1.93
HMG20B-205ENST00000435022 CNMDO75829 334 aa27.08■■□□□ 1.93
HMG20B-205ENST00000435022 IFIT2P09913 472 aaKnown RBP27.08■■□□□ 1.93
HMG20B-205ENST00000435022 CYP2D6P10635 497 aa27.08■■□□□ 1.93
HMG20B-205ENST00000435022 CERKLQ49MI3 558 aaPredicted RBP27.08■■□□□ 1.93
HMG20B-205ENST00000435022 GPRC5AQ8NFJ5 357 aa27.08■■□□□ 1.93
HMG20B-205ENST00000435022 SDR42E1Q8WUS8 393 aa27.08■■□□□ 1.93
HMG20B-205ENST00000435022 DPF3Q92784 378 aa27.08■■□□□ 1.93
HMG20B-205ENST00000435022 BCL11AQ9H165 835 aa27.08■■□□□ 1.93
HMG20B-205ENST00000435022 PCDH10Q9P2E7 1040 aa27.08■■□□□ 1.93
HMG20B-205ENST00000435022 RAB11FIP3O75154 756 aa27.07■■□□□ 1.92
HMG20B-205ENST00000435022 ERVK-9P63128 1117 aa27.07■■□□□ 1.92
HMG20B-205ENST00000435022 ERVK-24P63145 666 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms