RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 RPS6KB1P23443 525 aa27.39■■□□□ 1.98
SMARCAL1-208ENST00000434435 MCM5P33992 734 aa27.39■■□□□ 1.98
SMARCAL1-208ENST00000434435 CCDC17Q96LX7 622 aa27.39■■□□□ 1.98
SMARCAL1-208ENST00000434435 UPF3BQ9BZI7 483 aaKnown RBP27.39■■□□□ 1.98
SMARCAL1-208ENST00000434435 CYP46A1Q9Y6A2 500 aa27.39■■□□□ 1.98
SMARCAL1-208ENST00000434435 TSPY3P0CV98 308 aa27.38■■□□□ 1.97
SMARCAL1-208ENST00000434435 TSPY8P0CW00 308 aa27.38■■□□□ 1.97
SMARCAL1-208ENST00000434435 CERKLQ49MI3 558 aaPredicted RBP27.38■■□□□ 1.97
SMARCAL1-208ENST00000434435 DLK2Q6UY11 383 aa27.38■■□□□ 1.97
SMARCAL1-208ENST00000434435 RUFY3Q7L099 469 aa27.38■■□□□ 1.97
SMARCAL1-208ENST00000434435 DHX32Q7L7V1 743 aaKnown RBP27.38■■□□□ 1.97
SMARCAL1-208ENST00000434435 WDR19Q8NEZ3 1342 aa27.38■■□□□ 1.97
SMARCAL1-208ENST00000434435 PLIN4Q96Q06 1357 aa27.37■■□□□ 1.97
SMARCAL1-208ENST00000434435 CPA1P15085 419 aa27.37■■□□□ 1.97
SMARCAL1-208ENST00000434435 TFAP4Q01664 338 aa27.37■■□□□ 1.97
SMARCAL1-208ENST00000434435 FAM47AQ5JRC9 791 aa27.37■■□□□ 1.97
SMARCAL1-208ENST00000434435 CYB5R4Q7L1T6 521 aa27.37■■□□□ 1.97
SMARCAL1-208ENST00000434435 ZSWIM5Q9P217 1185 aa27.37■■□□□ 1.97
SMARCAL1-208ENST00000434435 PRC1O43663 620 aa27.36■■□□□ 1.97
SMARCAL1-208ENST00000434435 IQCA1Q86XH1 822 aa27.36■■□□□ 1.97
SMARCAL1-208ENST00000434435 NKX2-3Q8TAU0 364 aa27.36■■□□□ 1.97
SMARCAL1-208ENST00000434435 AKR1B1P15121 316 aa27.35■■□□□ 1.97
SMARCAL1-208ENST00000434435 ANTXR2P58335 489 aa27.35■■□□□ 1.97
SMARCAL1-208ENST00000434435 COL9A3Q14050 684 aaPredicted RBP27.35■■□□□ 1.97
SMARCAL1-208ENST00000434435 IL27Q8NEV9 243 aa27.35■■□□□ 1.97
SMARCAL1-208ENST00000434435 NEDD1Q8NHV4 660 aa27.35■■□□□ 1.97
SMARCAL1-208ENST00000434435 TRAF5O00463 557 aa27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 MPHOSPH10O00566 681 aaKnown RBP27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 PPP1R12BO60237 982 aaPredicted RBP27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 GDF11O95390 407 aa27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 NEK4P51957 841 aa27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 SART3Q15020 963 aaKnown RBP27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 ABCB5Q2M3G0 1257 aa27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 CHST3Q7LGC8 479 aa27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 UBAC1Q9BSL1 405 aa27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 MTA3Q9BTC8 594 aa27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 PDRG1Q9NUG6 133 aa27.34■■□□□ 1.97
SMARCAL1-208ENST00000434435 PHF20L1A8MW92 1017 aa27.33■■□□□ 1.97
SMARCAL1-208ENST00000434435 EXOSC10Q01780 885 aaKnown RBP27.33■■□□□ 1.97
SMARCAL1-208ENST00000434435 ZNF784Q8NCA9 323 aaPredicted RBP27.33■■□□□ 1.97
SMARCAL1-208ENST00000434435 TMEM87BQ96K49 555 aa27.33■■□□□ 1.97
SMARCAL1-208ENST00000434435 TCEANC2Q96MN5 208 aa27.33■■□□□ 1.97
SMARCAL1-208ENST00000434435 CABP5Q9NP86 173 aa27.33■■□□□ 1.97
SMARCAL1-208ENST00000434435 TSHZ2Q9NRE2 1034 aa27.33■■□□□ 1.97
SMARCAL1-208ENST00000434435 ZNF112Q9UJU3 913 aa27.33■■□□□ 1.97
SMARCAL1-208ENST00000434435 CAP2P40123 477 aa27.32■■□□□ 1.96
SMARCAL1-208ENST00000434435 PRKG1Q13976 671 aa27.32■■□□□ 1.96
SMARCAL1-208ENST00000434435 RRP1BQ14684 758 aaKnown RBP27.32■■□□□ 1.96
SMARCAL1-208ENST00000434435 CCDC178Q5BJE1 867 aa27.32■■□□□ 1.96
SMARCAL1-208ENST00000434435 TMEM179Q6ZVK1 233 aa27.32■■□□□ 1.96
SMARCAL1-208ENST00000434435 KLRG1Q96E93 195 aa27.32■■□□□ 1.96
SMARCAL1-208ENST00000434435 WRNIP1Q96S55 665 aa27.32■■□□□ 1.96
SMARCAL1-208ENST00000434435 ERICH2A1L162 156 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 ST18O60284 1047 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 CTNND1O60716 968 aaKnown RBP27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 FGD1P98174 961 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 SMC1BQ8NDV3 1235 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 ZKSCAN3Q9BRR0 538 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 LRRC2Q9BYS8 371 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 ZNF408Q9H9D4 720 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 GINM1Q9NU53 330 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 TCP11L1Q9NUJ3 509 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 PHIPQ8WWQ0 1821 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 TNKSO95271 1327 aa27.31■■□□□ 1.96
SMARCAL1-208ENST00000434435 IFIT3O14879 490 aaKnown RBP27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 USP2O75604 605 aaPredicted RBP27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 ITGBL1O95965 494 aaPredicted RBP27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 GH2P01242 217 aa27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 IREB2P48200 963 aaKnown RBP27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 TTLL12Q14166 644 aaPredicted RBP27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 TMEM67Q5HYA8 995 aa27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 ARMC9Q7Z3E5 817 aa27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 TTC14Q96N46 770 aa27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 ZSCAN10Q96SZ4 725 aaPredicted RBP27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 ZBTB21Q9ULJ3 1066 aa27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 ANGEL1Q9UNK9 670 aaKnown RBP27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 FZD1Q9UP38 647 aa27.3■■□□□ 1.96
SMARCAL1-208ENST00000434435 ASNSP08243 561 aa27.29■■□□□ 1.96
SMARCAL1-208ENST00000434435 INPP5BP32019 993 aa27.29■■□□□ 1.96
SMARCAL1-208ENST00000434435 FMR1Q06787 632 aaKnown RBP eCLIP27.29■■□□□ 1.96
SMARCAL1-208ENST00000434435 PPP4R3BQ5MIZ7 849 aa27.29■■□□□ 1.96
SMARCAL1-208ENST00000434435 Q6ZUG5 572 aa27.29■■□□□ 1.96
SMARCAL1-208ENST00000434435 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.29■■□□□ 1.96
SMARCAL1-208ENST00000434435 RBM46Q8TBY0 533 aaKnown RBP27.29■■□□□ 1.96
SMARCAL1-208ENST00000434435 IGKV6D-41A0A0C4DH26 115 aa27.28■■□□□ 1.96
SMARCAL1-208ENST00000434435 SH2B2O14492 632 aaPredicted RBP27.28■■□□□ 1.96
SMARCAL1-208ENST00000434435 TOMM70O94826 608 aa27.28■■□□□ 1.96
SMARCAL1-208ENST00000434435 WTAPQ15007 396 aa27.28■■□□□ 1.96
SMARCAL1-208ENST00000434435 SHROOM1Q2M3G4 852 aaPredicted RBP27.28■■□□□ 1.96
SMARCAL1-208ENST00000434435 CEP95Q96GE4 821 aa27.28■■□□□ 1.96
SMARCAL1-208ENST00000434435 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.28■■□□□ 1.96
SMARCAL1-208ENST00000434435 ALDH8A1Q9H2A2 487 aaPredicted RBP27.28■■□□□ 1.96
SMARCAL1-208ENST00000434435 IL17RBQ9NRM6 502 aa27.28■■□□□ 1.96
SMARCAL1-208ENST00000434435 NMT2O60551 498 aa27.27■■□□□ 1.96
SMARCAL1-208ENST00000434435 SEPT2Q15019 361 aa27.27■■□□□ 1.96
SMARCAL1-208ENST00000434435 ANKRD1Q15327 319 aa27.27■■□□□ 1.96
SMARCAL1-208ENST00000434435 MAP3K11Q16584 847 aa27.27■■□□□ 1.96
SMARCAL1-208ENST00000434435 NOL9Q5SY16 702 aaKnown RBP27.27■■□□□ 1.96
SMARCAL1-208ENST00000434435 SCYL3Q8IZE3 742 aa27.27■■□□□ 1.96
SMARCAL1-208ENST00000434435 FBXL16Q8N461 479 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms