RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 CCDC155Q8N6L0 562 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 IQUBQ8NA54 791 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 CCT6BQ92526 530 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 CTDSPL2Q05D32 466 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 GDPD2Q9HCC8 539 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 TTLL3Q9Y4R7 772 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 WDR17Q8IZU2 1322 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 TRAF5O00463 557 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 POLGP54098 1239 aaPredicted RBP11.13□□□□□ -0.63
FN1-209ENST00000432072 MASTLQ96GX5 879 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 SUGCTQ9HAC7 445 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 ANGEL1Q9UNK9 670 aaKnown RBP11.13□□□□□ -0.63
FN1-209ENST00000432072 DISP1Q96F81 1524 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
FN1-209ENST00000432072 TYW5A2RUC4 315 aaKnown RBP11.13□□□□□ -0.63
FN1-209ENST00000432072 BTDP43251 543 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 IFRD2Q12894 506 aaPredicted RBP11.13□□□□□ -0.63
FN1-209ENST00000432072 HSP90AA4PQ58FG1 418 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 KIF18AQ8NI77 898 aa11.13□□□□□ -0.63
FN1-209ENST00000432072 IL6STP40189 918 aaPredicted RBP11.12□□□□□ -0.63
FN1-209ENST00000432072 FAM102BQ5T8I3 360 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 CEP85Q6P2H3 762 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 CNNM4Q6P4Q7 775 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 CRCPO75575 148 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 SPHKAPQ2M3C7 1700 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 PIK3AP1Q6ZUJ8 805 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 RIMS1Q86UR5 1692 aaKnown RBP11.12□□□□□ -0.63
FN1-209ENST00000432072 SESTD1Q86VW0 696 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
FN1-209ENST00000432072 ATF7P17544 494 aaPredicted RBP11.12□□□□□ -0.63
FN1-209ENST00000432072 CKAP4Q07065 602 aaKnown RBP11.12□□□□□ -0.63
FN1-209ENST00000432072 MIER3Q7Z3K6 550 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 CDC42BPAQ5VT25 1732 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 SPTLC2O15270 562 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 VAMP4O75379 141 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 SPAG1Q07617 926 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 FBXO11Q86XK2 927 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 LRRC47Q8N1G4 583 aaKnown RBP11.12□□□□□ -0.63
FN1-209ENST00000432072 NEURL1BA8MQ27 555 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 TNNI1P19237 187 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 KLHDC4Q8TBB5 520 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 SWAP70Q9UH65 585 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 V9GY48 417 aaPredicted RBP11.12□□□□□ -0.63
FN1-209ENST00000432072 CCDC175P0C221 793 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 ATP2A2P16615 1042 aaKnown RBP11.12□□□□□ -0.63
FN1-209ENST00000432072 GEN1Q17RS7 908 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 MCTP2Q6DN12 878 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 TSPYL6Q8N831 410 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 GJD4Q96KN9 370 aaPredicted RBP11.12□□□□□ -0.63
FN1-209ENST00000432072 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.12□□□□□ -0.63
FN1-209ENST00000432072 ANKARQ7Z5J8 1434 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 CHRNDQ07001 517 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 FAM47AQ5JRC9 791 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 C1orf228Q6PIY5 440 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 RETREG2Q8NC44 543 aa11.12□□□□□ -0.63
FN1-209ENST00000432072 PAIP2Q9BPZ3 127 aaKnown RBP11.12□□□□□ -0.63
FN1-209ENST00000432072 UBXN1Q04323 297 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 SND1Q7KZF4 910 aaKnown RBP eCLIP11.11□□□□□ -0.632e-6■■■□□ 17.5
FN1-209ENST00000432072 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 CAPN15O75808 1086 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 IL13P35225 146 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 REXO1Q8N1G1 1221 aaKnown RBP11.11□□□□□ -0.63
FN1-209ENST00000432072 MMS19Q96T76 1030 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 ZNF215Q9UL58 517 aaPredicted RBP11.11□□□□□ -0.63
FN1-209ENST00000432072 CAPN9O14815 690 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 LIN9Q5TKA1 542 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 KRT26Q7Z3Y9 468 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 BRAPQ7Z569 592 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 RAET1EQ8TD07 263 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 R3HDM1Q15032 1099 aaKnown RBP11.11□□□□□ -0.63
FN1-209ENST00000432072 TMCO3Q6UWJ1 677 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 STIM2Q9P246 746 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 ZAP70P43403 619 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 ZSCAN22P10073 491 aaPredicted RBP11.11□□□□□ -0.63
FN1-209ENST00000432072 HDAC1Q13547 482 aaPredicted RBP11.11□□□□□ -0.63
FN1-209ENST00000432072 APOL6Q9BWW8 343 aa11.11□□□□□ -0.63
FN1-209ENST00000432072 YWHAEP62258 255 aaKnown RBP11.1□□□□□ -0.63
FN1-209ENST00000432072 TTC30AQ86WT1 665 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 PSTPIP2Q9H939 334 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 ARID4AP29374 1257 aaPredicted RBP11.1□□□□□ -0.63
FN1-209ENST00000432072 GRPEL1Q9HAV7 217 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 DMP1Q13316 513 aaPredicted RBP11.1□□□□□ -0.63
FN1-209ENST00000432072 KRT25Q7Z3Z0 450 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 ZNF830Q96NB3 372 aaPredicted RBP11.1□□□□□ -0.63
FN1-209ENST00000432072 DBNDD2Q9BQY9 259 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 APOBEC3FQ8IUX4 373 aaKnown RBP11.1□□□□□ -0.63
FN1-209ENST00000432072 MRPS27Q92552 414 aaKnown RBP11.1□□□□□ -0.63
FN1-209ENST00000432072 KCNH4Q9UQ05 1017 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 RTL1A6NKG5 1358 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 SMC1BQ8NDV3 1235 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 JAKMIP2Q96AA8 810 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 TRMT1Q9NXH9 659 aaKnown RBP11.1□□□□□ -0.63
FN1-209ENST00000432072 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
FN1-209ENST00000432072 GIPC1O14908 333 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 XRCC6P12956 609 aaKnown RBP eCLIP11.1□□□□□ -0.631e-25■■■■■ 42.4
FN1-209ENST00000432072 ZNF165P49910 485 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 CUL4BQ13620 913 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 SPDYE2Q495Y8 402 aa11.1□□□□□ -0.63
FN1-209ENST00000432072 SPICE1Q8N0Z3 855 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms