RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 RANBP2P49792 3224 aaKnown RBP17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 MAP4K4O95819 1239 aaPredicted RBP17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 PLCG2P16885 1265 aa17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 SLFNL1Q499Z3 407 aa17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 CHRDL2Q6WN34 429 aa17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 P2RX7Q99572 595 aaKnown RBP17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 AS3MTQ9HBK9 375 aa17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 PLXNB2O15031 1838 aa17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 CEP290O15078 2479 aa17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 GH2P01242 217 aa17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 TFRCP02786 760 aaKnown RBP17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 BACE1P56817 501 aa17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 FAM110CQ1W6H9 321 aa17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 EDC3Q96F86 508 aaKnown RBP17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 ZNF512BQ96KM6 892 aaPredicted RBP17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 TXNRD2Q9NNW7 524 aa17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 TMOD4Q9NZQ9 345 aa17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 ZBTB21Q9ULJ3 1066 aa17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 COG6Q9Y2V7 657 aa17.39■□□□□ 0.37
SMARCE1-205ENST00000431889 FARP2O94887 1054 aaPredicted RBP17.38■□□□□ 0.37
SMARCE1-205ENST00000431889 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
SMARCE1-205ENST00000431889 SGPL1O95470 568 aa17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 HLA-DOAP06340 250 aa17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 ASNSP08243 561 aa17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 CYP2B6P20813 491 aa17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 FXR1P51114 621 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 SH3D19Q5HYK7 790 aa17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 FOXP4Q8IVH2 680 aaPredicted RBP17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 DIS3LQ8TF46 1054 aaKnown RBP17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 DNAJC2Q99543 621 aaKnown RBP17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 PAGR1Q9BTK6 254 aa17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 ZBED9Q6R2W3 1325 aa17.37■□□□□ 0.37
SMARCE1-205ENST00000431889 PABPC4Q13310 644 aaKnown RBP eCLIP17.36■□□□□ 0.374e-8■□□□□ 9.6
SMARCE1-205ENST00000431889 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 Q3C1V9 767 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 POTEEQ6S8J3 1075 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 UBE2Q1Q7Z7E8 422 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 NKX2-3Q8TAU0 364 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 RHPN1Q8TCX5 695 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 USP17L10C9JJH3 530 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 CHGBP05060 677 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 GCLCP48506 637 aaPredicted RBP17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 PLCD1P51178 756 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 HERVK_113P62684 666 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 IRF5Q13568 498 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 SIRT2Q8IXJ6 389 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 GJD2Q9UKL4 321 aa17.36■□□□□ 0.37
SMARCE1-205ENST00000431889 NAV1Q8NEY1 1877 aa17.35■□□□□ 0.37
SMARCE1-205ENST00000431889 GOLIM4O00461 696 aa17.35■□□□□ 0.37
SMARCE1-205ENST00000431889 MAP3K12Q12852 859 aa17.35■□□□□ 0.37
SMARCE1-205ENST00000431889 METTL16Q86W50 562 aaKnown RBP17.35■□□□□ 0.37
SMARCE1-205ENST00000431889 ACER1Q8TDN7 264 aa17.35■□□□□ 0.37
SMARCE1-205ENST00000431889 PXYLP1Q8TE99 480 aa17.35■□□□□ 0.37
SMARCE1-205ENST00000431889 RBM27Q9P2N5 1060 aaKnown RBP17.35■□□□□ 0.37
SMARCE1-205ENST00000431889 ALPK3Q96L96 1907 aa17.35■□□□□ 0.37
SMARCE1-205ENST00000431889 TRIB2Q92519 343 aa17.34■□□□□ 0.37
SMARCE1-205ENST00000431889 PAWRQ96IZ0 340 aaKnown RBP17.34■□□□□ 0.37
SMARCE1-205ENST00000431889 FEZ1Q99689 392 aa17.34■□□□□ 0.37
SMARCE1-205ENST00000431889 TBC1D2Q9BYX2 928 aa17.34■□□□□ 0.37
SMARCE1-205ENST00000431889 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMARCE1-205ENST00000431889 PORCNQ9H237 461 aa17.34■□□□□ 0.37
SMARCE1-205ENST00000431889 RBPJLQ9UBG7 517 aa17.34■□□□□ 0.37
SMARCE1-205ENST00000431889 MAGEB6P1A0A0J9YX57 407 aa17.33■□□□□ 0.37
SMARCE1-205ENST00000431889 CYP2D6P10635 497 aa17.33■□□□□ 0.37
SMARCE1-205ENST00000431889 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.37
SMARCE1-205ENST00000431889 SDR42E1Q8WUS8 393 aa17.33■□□□□ 0.37
SMARCE1-205ENST00000431889 RIOK1Q9BRS2 568 aaKnown RBP17.33■□□□□ 0.37
SMARCE1-205ENST00000431889 PAK6Q9NQU5 681 aaPredicted RBP17.33■□□□□ 0.37
SMARCE1-205ENST00000431889 ZNF532Q9HCE3 1301 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 SMIM22K7EJ46 135 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 PDE6AP16499 860 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 CCL14Q16627 93 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 CERKLQ49MI3 558 aaPredicted RBP17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 SLC9C2Q5TAH2 1124 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 C20orf194Q5TEA3 1177 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 GPRC5AQ8NFJ5 357 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 SERPINB13Q9UIV8 391 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 DDX60LQ5H9U9 1706 aaKnown RBP17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 C19orf81C9J6K1 198 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 POLR3DP05423 398 aaPredicted RBP17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 HOXA7P31268 230 aaPredicted RBP17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 ABCB5Q2M3G0 1257 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 USP17L2Q6R6M4 530 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 LCORLQ8N3X6 602 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 SLC44A5Q8NCS7 719 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 HTATIP2Q9BUP3 242 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 BOLA2Q9H3K6 86 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 MORF4L1Q9UBU8 362 aa17.32■□□□□ 0.36
SMARCE1-205ENST00000431889 TRIOBPQ9H2D6 2365 aa17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 DNAH12Q6ZR08 3092 aa17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 MPHOSPH10O00566 681 aaKnown RBP17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 HMGCRP04035 888 aa17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 IFIT2P09913 472 aaKnown RBP17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 SHMT1P34896 483 aa17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 ERVK-9P63128 1117 aa17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 ERVK-24P63145 666 aa17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 WDR78Q5VTH9 848 aa17.31■□□□□ 0.36
SMARCE1-205ENST00000431889 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms