RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 TCP10Q12799 353 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 NFIAQ12857 509 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 LAPTM4AQ15012 233 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 CCDC102BQ68D86 513 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 ERICH6Q7L0X2 663 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 TRMT44Q8IYL2 757 aaKnown RBP10.25□□□□□ -0.77
CDH13-203ENST00000431540 KLHDC4Q8TBB5 520 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 U2AF1L4Q8WU68 220 aaKnown RBP10.25□□□□□ -0.77
CDH13-203ENST00000431540 WNT2BQ93097 391 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 SHISA4Q96DD7 197 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 DHX36Q9H2U1 1008 aaKnown RBP10.25□□□□□ -0.77
CDH13-203ENST00000431540 PAK6Q9NQU5 681 aaPredicted RBP10.25□□□□□ -0.77
CDH13-203ENST00000431540 AGTPBP1Q9UPW5 1226 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 RFX7Q2KHR2 1363 aa10.25□□□□□ -0.77
CDH13-203ENST00000431540 LOC285556D6RIA3 1793 aa10.24□□□□□ -0.77
CDH13-203ENST00000431540 FOCADQ5VW36 1801 aa10.24□□□□□ -0.77
CDH13-203ENST00000431540 MTFR1Q15390 333 aa10.24□□□□□ -0.77
CDH13-203ENST00000431540 DIXDC1Q155Q3 683 aa10.24□□□□□ -0.77
CDH13-203ENST00000431540 SH3D19Q5HYK7 790 aa10.24□□□□□ -0.77
CDH13-203ENST00000431540 DZIP1Q86YF9 867 aaKnown RBP10.24□□□□□ -0.77
CDH13-203ENST00000431540 CERS3Q8IU89 383 aa10.24□□□□□ -0.77
CDH13-203ENST00000431540 FOXP4Q8IVH2 680 aaPredicted RBP10.24□□□□□ -0.77
CDH13-203ENST00000431540 GTF3C2Q8WUA4 911 aaPredicted RBP10.24□□□□□ -0.77
CDH13-203ENST00000431540 AS3MTQ9HBK9 375 aa10.24□□□□□ -0.77
CDH13-203ENST00000431540 BIN2Q9UBW5 565 aaPredicted RBP10.24□□□□□ -0.77
CDH13-203ENST00000431540 GOLGA8CPA6NN73 597 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 C19orf81C9J6K1 198 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 TNPO2O14787 897 aaKnown RBP10.23□□□□□ -0.77
CDH13-203ENST00000431540 ZBTB7BO15156 539 aaPredicted RBP10.23□□□□□ -0.77
CDH13-203ENST00000431540 IPO8O15397 1037 aaKnown RBP10.23□□□□□ -0.77
CDH13-203ENST00000431540 XRCC5P13010 732 aaKnown RBP10.23□□□□□ -0.77
CDH13-203ENST00000431540 HOXA7P31268 230 aaPredicted RBP10.23□□□□□ -0.77
CDH13-203ENST00000431540 PHKA1P46020 1223 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 FLT3LGP49771 235 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 PRKCZQ05513 592 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 TRAF7Q6Q0C0 670 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 METTL16Q86W50 562 aaKnown RBP10.23□□□□□ -0.77
CDH13-203ENST00000431540 ZSCAN29Q8IWY8 852 aaPredicted RBP10.23□□□□□ -0.77
CDH13-203ENST00000431540 SMCR8Q8TEV9 937 aaPredicted RBP10.23□□□□□ -0.77
CDH13-203ENST00000431540 WDR18Q9BV38 432 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 GPR108Q9NPR9 543 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 SMC4Q9NTJ3 1288 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 PI4KBQ9UBF8 816 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 MROH7-TTC4A0A0A0MT08 1334 aa10.23□□□□□ -0.77
CDH13-203ENST00000431540 CDK5RAP2Q96SN8 1893 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 USP17L5A8MUK1 530 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 FARP2O94887 1054 aaPredicted RBP10.22□□□□□ -0.77
CDH13-203ENST00000431540 BAG3O95817 575 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 UQCRFS1P1P0C7P4 283 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 CYP2C8P10632 490 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 CAP2P40123 477 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 RHBDL3P58872 404 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 PPP4CP60510 307 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 NECAB2Q7Z6G3 386 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 ZFPM1Q8IX07 1006 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 ZNF280CQ8ND82 737 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 ZNF512BQ96KM6 892 aaPredicted RBP10.22□□□□□ -0.77
CDH13-203ENST00000431540 MORF4L1Q9UBU8 362 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 TAOK2Q9UL54 1235 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 RPTORQ8N122 1335 aa10.22□□□□□ -0.77
CDH13-203ENST00000431540 A0A1B0GUL7 405 aa10.21□□□□□ -0.77
CDH13-203ENST00000431540 DDTLA6NHG4 134 aaPredicted RBP10.21□□□□□ -0.77
CDH13-203ENST00000431540 EVI5O60447 810 aa10.21□□□□□ -0.77
CDH13-203ENST00000431540 TFRCP02786 760 aaKnown RBP10.21□□□□□ -0.77
CDH13-203ENST00000431540 ASNSP08243 561 aa10.21□□□□□ -0.77
CDH13-203ENST00000431540 ARID4AP29374 1257 aaPredicted RBP10.21□□□□□ -0.77
CDH13-203ENST00000431540 BTDP43251 543 aa10.21□□□□□ -0.77
CDH13-203ENST00000431540 TIMM10P62072 90 aa10.21□□□□□ -0.77
CDH13-203ENST00000431540 RASGRF1Q13972 1273 aa10.21□□□□□ -0.77
CDH13-203ENST00000431540 SH3BP5LQ7L8J4 393 aa10.21□□□□□ -0.77
CDH13-203ENST00000431540 NSUN4Q96CB9 384 aaKnown RBP10.21□□□□□ -0.77
CDH13-203ENST00000431540 XAGE2Q96GT9 111 aa10.21□□□□□ -0.77
CDH13-203ENST00000431540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.21□□□□□ -0.77
CDH13-203ENST00000431540 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
CDH13-203ENST00000431540 ABCF2Q9UG63 623 aa10.21□□□□□ -0.77
CDH13-203ENST00000431540 NOB1Q9ULX3 412 aaKnown RBP10.21□□□□□ -0.77
CDH13-203ENST00000431540 RANBP2P49792 3224 aaKnown RBP10.21□□□□□ -0.78
CDH13-203ENST00000431540 ALPK3Q96L96 1907 aa10.21□□□□□ -0.78
CDH13-203ENST00000431540 HMGCRP04035 888 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 INHAP05111 366 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 MYH1P12882 1939 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 MECOMQ03112 1051 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 ATF7IPQ6VMQ6 1270 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 GADL1Q6ZQY3 521 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 SPATA5Q8NB90 893 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 NOL10Q9BSC4 688 aaKnown RBP10.2□□□□□ -0.78
CDH13-203ENST00000431540 SIL1Q9H173 461 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 UNC93B1Q9H1C4 597 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 HMX1Q9NP08 348 aaPredicted RBP10.2□□□□□ -0.78
CDH13-203ENST00000431540 GJD2Q9UKL4 321 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 GABRQQ9UN88 632 aa10.2□□□□□ -0.78
CDH13-203ENST00000431540 PLXNB2O15031 1838 aa10.19□□□□□ -0.78
CDH13-203ENST00000431540 SRGAP3O43295 1099 aa10.19□□□□□ -0.78
CDH13-203ENST00000431540 BACE1P56817 501 aa10.19□□□□□ -0.78
CDH13-203ENST00000431540 SPP2Q13103 211 aa10.19□□□□□ -0.78
CDH13-203ENST00000431540 G3BP1Q13283 466 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDH13-203ENST00000431540 NBPF3Q9H094 633 aa10.19□□□□□ -0.78
CDH13-203ENST00000431540 DDX4Q9NQI0 724 aaKnown RBP10.19□□□□□ -0.78
CDH13-203ENST00000431540 HMG20BQ9P0W2 317 aa10.19□□□□□ -0.78
CDH13-203ENST00000431540 TRIM75PA6NK02 468 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms