RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SMARCA5O60264 1052 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-202ENST00000430200 ELNP15502 786 aa14.36□□□□□ -0.11
HDAC4-202ENST00000430200 RPAP2Q8IXW5 612 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-202ENST00000430200 LCORLQ8N3X6 602 aa14.36□□□□□ -0.11
HDAC4-202ENST00000430200 SMCR8Q8TEV9 937 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-202ENST00000430200 DNAJC2Q99543 621 aaKnown RBP14.36□□□□□ -0.11
HDAC4-202ENST00000430200 ASCC2Q9H1I8 757 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-202ENST00000430200 MYH4Q9Y623 1939 aa14.36□□□□□ -0.11
HDAC4-202ENST00000430200 ZNF532Q9HCE3 1301 aa14.36□□□□□ -0.11
HDAC4-202ENST00000430200 GNRH1P01148 92 aa14.35□□□□□ -0.11
HDAC4-202ENST00000430200 CYP2D6P10635 497 aa14.35□□□□□ -0.11
HDAC4-202ENST00000430200 GRK4P32298 578 aa14.35□□□□□ -0.11
HDAC4-202ENST00000430200 SHMT1P34896 483 aa14.35□□□□□ -0.11
HDAC4-202ENST00000430200 PLCD1P51178 756 aa14.35□□□□□ -0.11
HDAC4-202ENST00000430200 PRMT2P55345 433 aa14.35□□□□□ -0.11
HDAC4-202ENST00000430200 FCGRTP55899 365 aa14.35□□□□□ -0.11
HDAC4-202ENST00000430200 WDR18Q9BV38 432 aa14.35□□□□□ -0.11
HDAC4-202ENST00000430200 TXNRD2Q9NNW7 524 aa14.35□□□□□ -0.11
HDAC4-202ENST00000430200 ZNF236Q9UL36 1845 aa14.35□□□□□ -0.11
HDAC4-202ENST00000430200 GH2P01242 217 aa14.34□□□□□ -0.11
HDAC4-202ENST00000430200 ASNSP08243 561 aa14.34□□□□□ -0.11
HDAC4-202ENST00000430200 GUCY1A2P33402 732 aa14.34□□□□□ -0.11
HDAC4-202ENST00000430200 FLT3LGP49771 235 aa14.34□□□□□ -0.11
HDAC4-202ENST00000430200 FAM110CQ1W6H9 321 aa14.34□□□□□ -0.11
HDAC4-202ENST00000430200 TATDN1Q6P1N9 297 aa14.34□□□□□ -0.11
HDAC4-202ENST00000430200 CRACR2BQ8N4Y2 399 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-202ENST00000430200 RAET1EQ8TD07 263 aa14.34□□□□□ -0.11
HDAC4-202ENST00000430200 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
HDAC4-202ENST00000430200 SDR42E1Q8WUS8 393 aa14.34□□□□□ -0.11
HDAC4-202ENST00000430200 TRIOBPQ9H2D6 2365 aa14.33□□□□□ -0.11
HDAC4-202ENST00000430200 MS4A1P11836 297 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 CCL5P13501 91 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 USP5P45974 858 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 BACE1P56817 501 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 GABPAQ06546 454 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 MAP3K12Q12852 859 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 ARHGEF6Q15052 776 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 HSP90AB4PQ58FF6 505 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 SLC9C2Q5TAH2 1124 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 TSHZ3Q63HK5 1081 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 UBE2Q1Q7Z7E8 422 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 CLEC10AQ8IUN9 316 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 CLASRPQ8N2M8 674 aaKnown RBP14.33□□□□□ -0.12
HDAC4-202ENST00000430200 SLC44A5Q8NCS7 719 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 UNC93B1Q9H1C4 597 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 EHD4Q9H223 541 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 EMILIN3Q9NT22 766 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 PLXNA1Q9UIW2 1896 aa14.33□□□□□ -0.12
HDAC4-202ENST00000430200 MAGEB6P1A0A0J9YX57 407 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 TNPO2O14787 897 aaKnown RBP14.32□□□□□ -0.12
HDAC4-202ENST00000430200 PRKAB2O43741 272 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 IGSF3O75054 1194 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 HMMRO75330 724 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 INHAP05111 366 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 HLA-DOAP06340 250 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 IFIT2P09913 472 aaKnown RBP14.32□□□□□ -0.12
HDAC4-202ENST00000430200 TRIM32Q13049 653 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 ZYXQ15942 572 aaKnown RBP14.32□□□□□ -0.12
HDAC4-202ENST00000430200 NBPF11Q86T75 865 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 FOXP4Q8IVH2 680 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-202ENST00000430200 ACER1Q8TDN7 264 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 TMEM106CQ9BVX2 250 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 BOLA2Q9H3K6 86 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 ARMT1Q9H993 441 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 PAG1Q9NWQ8 432 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 SERPINB13Q9UIV8 391 aa14.32□□□□□ -0.12
HDAC4-202ENST00000430200 ZNFX1Q9P2E3 1918 aaKnown RBP14.32□□□□□ -0.12
HDAC4-202ENST00000430200 CYP2D7A0A087X1C5 515 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 ADCY3O60266 1144 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 MBD4O95243 580 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 ATP5JP18859 108 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 ADD2P35612 726 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 PDE3AQ14432 1141 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 SLAIN1Q8ND83 568 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 P2RX7Q99572 595 aaKnown RBP14.31□□□□□ -0.12
HDAC4-202ENST00000430200 TBC1D2Q9BYX2 928 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 AS3MTQ9HBK9 375 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 DCP1AQ9NPI6 582 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-202ENST00000430200 MORF4L1Q9UBU8 362 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 PNMA3Q9UL41 463 aa14.31□□□□□ -0.12
HDAC4-202ENST00000430200 USP17L10C9JJH3 530 aa14.3□□□□□ -0.12
HDAC4-202ENST00000430200 RAB11FIP3O75154 756 aa14.3□□□□□ -0.12
HDAC4-202ENST00000430200 CNMDO75829 334 aa14.3□□□□□ -0.12
HDAC4-202ENST00000430200 HOXA7P31268 230 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-202ENST00000430200 HERVK_113P62684 666 aa14.3□□□□□ -0.12
HDAC4-202ENST00000430200 IRF5Q13568 498 aa14.3□□□□□ -0.12
HDAC4-202ENST00000430200 HAUS7Q99871 368 aa14.3□□□□□ -0.12
HDAC4-202ENST00000430200 PORCNQ9H237 461 aa14.3□□□□□ -0.12
HDAC4-202ENST00000430200 GJD2Q9UKL4 321 aa14.3□□□□□ -0.12
HDAC4-202ENST00000430200 LAMA2P24043 3122 aaKnown RBP14.29□□□□□ -0.12
HDAC4-202ENST00000430200 A0A1W2PRG0 241 aa14.29□□□□□ -0.12
HDAC4-202ENST00000430200 GJA8P48165 433 aa14.29□□□□□ -0.12
HDAC4-202ENST00000430200 TTF1Q15361 905 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-202ENST00000430200 KIAA1755Q5JYT7 1200 aa14.29□□□□□ -0.12
HDAC4-202ENST00000430200 DYNLL2Q96FJ2 89 aa14.29□□□□□ -0.12
HDAC4-202ENST00000430200 C12orf42Q96LP6 360 aa14.29□□□□□ -0.12
HDAC4-202ENST00000430200 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
HDAC4-202ENST00000430200 RBPJLQ9UBG7 517 aa14.29□□□□□ -0.12
HDAC4-202ENST00000430200 GJB1P08034 283 aa14.28□□□□□ -0.12
HDAC4-202ENST00000430200 VCAM1P19320 739 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms