RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	TRIM75P	A6NK02	468 aa		21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738	EVI5	O60447	810 aa		21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738	IDH1	O75874	414 aa	Known RBP	21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738	CYP7A1	P22680	504 aa		21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738	CAP2	P40123	477 aa		21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738	CCDC84	Q86UT8	332 aa	Predicted RBP	21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738	MAPKAPK5	Q8IW41	473 aa		21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738	CLASRP	Q8N2M8	674 aa	Known RBP	21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738	COA7	Q96BR5	231 aa		21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738	LOC285556	D6RIA3	1793 aa		21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738	RAB11FIP3	O75154	756 aa		21.6	■■□□□ 1.05
MRPL28-203	ENST00000429738	DYNLL1	P63167	89 aa	Known RBP	21.6	■■□□□ 1.05
MRPL28-203	ENST00000429738	CERS3	Q8IU89	383 aa		21.6	■■□□□ 1.05
MRPL28-203	ENST00000429738	MAGEB6	Q8N7X4	407 aa		21.6	■■□□□ 1.05
MRPL28-203	ENST00000429738	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	21.6	■■□□□ 1.05
MRPL28-203	ENST00000429738	TBC1D2	Q9BYX2	928 aa		21.6	■■□□□ 1.05
MRPL28-203	ENST00000429738	DNAJC18	Q9H819	358 aa		21.6	■■□□□ 1.05
MRPL28-203	ENST00000429738	PAK6	Q9NQU5	681 aa	Predicted RBP	21.6	■■□□□ 1.05
MRPL28-203	ENST00000429738	AGTPBP1	Q9UPW5	1226 aa		21.6	■■□□□ 1.05
MRPL28-203	ENST00000429738	ANKRD13C	Q8N6S4	541 aa		21.59	■■□□□ 1.05
MRPL28-203	ENST00000429738	CRISPLD2	Q9H0B8	497 aa		21.59	■■□□□ 1.05
MRPL28-203	ENST00000429738	MAP3K12	Q12852	859 aa		21.58	■■□□□ 1.05
MRPL28-203	ENST00000429738	FOXP4	Q8IVH2	680 aa	Predicted RBP	21.58	■■□□□ 1.05
MRPL28-203	ENST00000429738	PNMA3	Q9UL41	463 aa		21.58	■■□□□ 1.05
MRPL28-203	ENST00000429738	PALD1	Q9ULE6	856 aa		21.58	■■□□□ 1.05
MRPL28-203	ENST00000429738	APBB1	O00213	710 aa		21.57	■■□□□ 1.04
MRPL28-203	ENST00000429738	FAM110C	Q1W6H9	321 aa		21.57	■■□□□ 1.04
MRPL28-203	ENST00000429738	TREML2	Q5T2D2	321 aa		21.57	■■□□□ 1.04
MRPL28-203	ENST00000429738	MIGA1	Q8NAN2	632 aa		21.57	■■□□□ 1.04
MRPL28-203	ENST00000429738	PROCA1	Q8NCQ7	364 aa	Predicted RBP	21.57	■■□□□ 1.04
MRPL28-203	ENST00000429738	ZNF280C	Q8ND82	737 aa		21.57	■■□□□ 1.04
MRPL28-203	ENST00000429738	TAOK2	Q9UL54	1235 aa		21.57	■■□□□ 1.04
MRPL28-203	ENST00000429738	DDX60L	Q5H9U9	1706 aa	Known RBP	21.56	■■□□□ 1.04
MRPL28-203	ENST00000429738	USP17L5	A8MUK1	530 aa		21.56	■■□□□ 1.04
MRPL28-203	ENST00000429738	SPP2	Q13103	211 aa		21.56	■■□□□ 1.04
MRPL28-203	ENST00000429738	TTF1	Q15361	905 aa	Predicted RBP	21.56	■■□□□ 1.04
MRPL28-203	ENST00000429738	PAWR	Q96IZ0	340 aa	Known RBP	21.56	■■□□□ 1.04
MRPL28-203	ENST00000429738	STAP2	Q9UGK3	403 aa		21.56	■■□□□ 1.04
MRPL28-203	ENST00000429738	IFIT2	P09913	472 aa	Known RBP	21.55	■■□□□ 1.04
MRPL28-203	ENST00000429738	GCLC	P48506	637 aa	Predicted RBP	21.55	■■□□□ 1.04
MRPL28-203	ENST00000429738	SH3D19	Q5HYK7	790 aa		21.55	■■□□□ 1.04
MRPL28-203	ENST00000429738	NECAB2	Q7Z6G3	386 aa		21.55	■■□□□ 1.04
MRPL28-203	ENST00000429738	RIOK1	Q9BRS2	568 aa	Known RBP	21.55	■■□□□ 1.04
MRPL28-203	ENST00000429738	HLA-DOA	P06340	250 aa		21.54	■■□□□ 1.04
MRPL28-203	ENST00000429738	ASNS	P08243	561 aa		21.54	■■□□□ 1.04
MRPL28-203	ENST00000429738	JAG1	P78504	1218 aa		21.54	■■□□□ 1.04
MRPL28-203	ENST00000429738	SLC17A8	Q8NDX2	589 aa		21.54	■■□□□ 1.04
MRPL28-203	ENST00000429738	WDR18	Q9BV38	432 aa		21.54	■■□□□ 1.04
MRPL28-203	ENST00000429738	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	21.54	■■□□□ 1.04
MRPL28-203	ENST00000429738	GINM1	Q9NU53	330 aa		21.54	■■□□□ 1.04
MRPL28-203	ENST00000429738	SAP30BP	Q9UHR5	308 aa	Known RBP	21.54	■■□□□ 1.04
MRPL28-203	ENST00000429738	LAMA3	Q16787	3333 aa		21.53	■■□□□ 1.04
MRPL28-203	ENST00000429738	SOX1	O00570	391 aa	Predicted RBP	21.53	■■□□□ 1.04
MRPL28-203	ENST00000429738	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	21.53	■■□□□ 1.04
MRPL28-203	ENST00000429738	ANKLE1	Q8NAG6	615 aa		21.53	■■□□□ 1.04
MRPL28-203	ENST00000429738	AS3MT	Q9HBK9	375 aa		21.53	■■□□□ 1.04
MRPL28-203	ENST00000429738	GJD2	Q9UKL4	321 aa		21.53	■■□□□ 1.04
MRPL28-203	ENST00000429738	PDE6A	P16499	860 aa		21.52	■■□□□ 1.04
MRPL28-203	ENST00000429738	USP5	P45974	858 aa		21.52	■■□□□ 1.04
MRPL28-203	ENST00000429738	HMGCS2	P54868	508 aa		21.52	■■□□□ 1.04
MRPL28-203	ENST00000429738	PABPC4	Q13310	644 aa	Known RBP eCLIP	21.52	■■□□□ 1.04	7e-9	■■■■■ 41.8
MRPL28-203	ENST00000429738	EHD4	Q9H223	541 aa		21.52	■■□□□ 1.04
MRPL28-203	ENST00000429738	NAV1	Q8NEY1	1877 aa		21.52	■■□□□ 1.03
MRPL28-203	ENST00000429738	TCRBV5S4A2T	A0A5A2	114 aa		21.51	■■□□□ 1.03
MRPL28-203	ENST00000429738	GOLIM4	O00461	696 aa		21.51	■■□□□ 1.03
MRPL28-203	ENST00000429738	HMGCR	P04035	888 aa		21.51	■■□□□ 1.03
MRPL28-203	ENST00000429738	ATP5J	P18859	108 aa		21.51	■■□□□ 1.03
MRPL28-203	ENST00000429738	SHROOM1	Q2M3G4	852 aa	Predicted RBP	21.51	■■□□□ 1.03
MRPL28-203	ENST00000429738	SLC9C2	Q5TAH2	1124 aa		21.51	■■□□□ 1.03
MRPL28-203	ENST00000429738	TATDN1	Q6P1N9	297 aa		21.51	■■□□□ 1.03
MRPL28-203	ENST00000429738	DIS3L	Q8TF46	1054 aa	Known RBP	21.51	■■□□□ 1.03
MRPL28-203	ENST00000429738	LRCH3	Q96II8	777 aa		21.51	■■□□□ 1.03
MRPL28-203	ENST00000429738	DNAJC2	Q99543	621 aa	Known RBP	21.51	■■□□□ 1.03
MRPL28-203	ENST00000429738	GDF11	O95390	407 aa		21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	BMP8B	P34820	402 aa		21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	BACE1	P56817	501 aa		21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	EDC3	Q96F86	508 aa	Known RBP	21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	GDF15	Q99988	308 aa		21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	TRIM34	Q9BYJ4	488 aa		21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	ASCC2	Q9H1I8	757 aa	Predicted RBP	21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	HMX1	Q9NP08	348 aa	Predicted RBP	21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	ZBTB21	Q9ULJ3	1066 aa		21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	MYH7	P12883	1935 aa		21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	ALPK3	Q96L96	1907 aa		21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	RPTOR	Q8N122	1335 aa		21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	ZNF532	Q9HCE3	1301 aa		21.5	■■□□□ 1.03
MRPL28-203	ENST00000429738	MAGEB6P1	A0A0J9YX57	407 aa		21.49	■■□□□ 1.03
MRPL28-203	ENST00000429738	DLL1	O00548	723 aa		21.49	■■□□□ 1.03
MRPL28-203	ENST00000429738	MTMR2	Q13614	643 aa		21.49	■■□□□ 1.03
MRPL28-203	ENST00000429738	LRRCC1	Q9C099	1032 aa		21.49	■■□□□ 1.03
MRPL28-203	ENST00000429738	BOLA2	Q9H3K6	86 aa		21.49	■■□□□ 1.03
MRPL28-203	ENST00000429738	SERPINB13	Q9UIV8	391 aa		21.49	■■□□□ 1.03
MRPL28-203	ENST00000429738	COL6A3	P12111	3177 aa		21.48	■■□□□ 1.03
MRPL28-203	ENST00000429738	TTC6	Q86TZ1	520 aa		21.48	■■□□□ 1.03
MRPL28-203	ENST00000429738	HAUS7	Q99871	368 aa		21.48	■■□□□ 1.03
MRPL28-203	ENST00000429738	NBPF3	Q9H094	633 aa		21.48	■■□□□ 1.03
MRPL28-203	ENST00000429738	PAG1	Q9NWQ8	432 aa		21.48	■■□□□ 1.03
MRPL28-203	ENST00000429738	C19orf81	C9J6K1	198 aa		21.47	■■□□□ 1.03
MRPL28-203	ENST00000429738	HOXA7	P31268	230 aa	Predicted RBP	21.47	■■□□□ 1.03
MRPL28-203	ENST00000429738	PLCD1	P51178	756 aa		21.47	■■□□□ 1.03

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms