RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 OXER1Q8TDS5 423 aa15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 GTPBP4Q9BZE4 634 aaKnown RBP15.26■□□□□ 0.03
SNRNP200-202ENST00000429650 CAMTA2O94983 1202 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 SARSP49591 514 aaKnown RBP15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 ETF1P62495 437 aaKnown RBP15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 CHRNDQ07001 517 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 GOLGA8FQ08AF8 430 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 GOLGA8DPQ0D2H9 430 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 PARP10Q53GL7 1025 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 FBXO38Q6PIJ6 1188 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 ADGRA1Q86SQ6 560 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 HOMER1Q86YM7 354 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 UBAC1Q9BSL1 405 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 SRPRBQ9Y5M8 271 aaKnown RBP15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 BCL9LQ86UU0 1499 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 LAMB2P55268 1798 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 CYP7A1P22680 504 aa15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 FMR1Q06787 632 aaKnown RBP eCLIP15.25■□□□□ 0.033e-7■■■□□ 14.7
SNRNP200-202ENST00000429650 MORC2Q9Y6X9 1032 aaPredicted RBP15.25■□□□□ 0.03
SNRNP200-202ENST00000429650 WNK3Q9BYP7 1800 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 NTSR2O95665 410 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 CRKLP46109 303 aaKnown RBP15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 MORC3Q14149 939 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 SEC23AQ15436 765 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 TMEM139Q8IV31 216 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 MLKLQ8NB16 471 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 SDR42E1Q8WUS8 393 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 SMARCE1Q969G3 411 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 ACTN4O43707 911 aaKnown RBP15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 ZNF18P17022 549 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 TRIM65Q6PJ69 517 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 LRRN4CLQ8ND94 238 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 CABP5Q9NP86 173 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 ANAPC4Q9UJX5 808 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 CEP131Q9UPN4 1083 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 IQSEC3Q9UPP2 1182 aaPredicted RBP15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 NFE2L3Q9Y4A8 694 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 TNKSO95271 1327 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 PHLPP2Q6ZVD8 1323 aa15.24■□□□□ 0.03
SNRNP200-202ENST00000429650 MINDY4BA8MYZ0 360 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 ATP2B1P20020 1258 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 TBX2Q13207 712 aaPredicted RBP15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 ZNF827Q17R98 1081 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 FCHSD1Q86WN1 690 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 REXO1L1PQ8IX06 675 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 GRAMD1CQ8IYS0 662 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 ENOX1Q8TC92 643 aaKnown RBP15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 SHISA4Q96DD7 197 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 RNF26Q9BY78 433 aaPredicted RBP15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 DACH1Q9UI36 760 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.23■□□□□ 0.032e-7■□□□□ 9.3
SNRNP200-202ENST00000429650 MYH2Q9UKX2 1941 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 COL4A1P02462 1669 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 SMIM22K7EJ46 135 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 USP49Q70CQ1 688 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 PDILTQ8N807 584 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 TRIML1Q8N9V2 468 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 ESR2Q92731 530 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 CSRNP2Q9H175 543 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 DNAJC5Q9H3Z4 198 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 DNAI1Q9UI46 699 aa15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 NIP7Q9Y221 180 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNRNP200-202ENST00000429650 MYH14Q7Z406 1995 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 ATP6V1AP38606 617 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 NOL10Q9BSC4 688 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 CICQ96RK0 1608 aaPredicted RBP15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 ZNF804BA4D1E1 1349 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 RREB1Q92766 1687 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 MAGEB6P1A0A0J9YX57 407 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 ARHGAP6O43182 974 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 PPP2R5BQ15173 497 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 ERCC6LQ2NKX8 1250 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 KANK3Q6NY19 840 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 TRMT44Q8IYL2 757 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 SPATA20Q8TB22 786 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 MED15Q96RN5 788 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 ABCF2Q9UG63 623 aa15.22■□□□□ 0.03
SNRNP200-202ENST00000429650 NPHP1O15259 732 aa15.21■□□□□ 0.03
SNRNP200-202ENST00000429650 FANCGO15287 622 aa15.21■□□□□ 0.03
SNRNP200-202ENST00000429650 PKN1Q16512 942 aa15.21■□□□□ 0.03
SNRNP200-202ENST00000429650 RAI14Q9P0K7 980 aa15.21■□□□□ 0.03
SNRNP200-202ENST00000429650 BAZ2AQ9UIF9 1905 aaKnown RBP15.21■□□□□ 0.03
SNRNP200-202ENST00000429650 CACNA1SQ13698 1873 aa15.21■□□□□ 0.03
SNRNP200-202ENST00000429650 FAM205CA6NFA0 338 aa15.21■□□□□ 0.03
SNRNP200-202ENST00000429650 ENAHQ8N8S7 591 aaPredicted RBP15.21■□□□□ 0.03
SNRNP200-202ENST00000429650 RIOK1Q9BRS2 568 aaKnown RBP15.21■□□□□ 0.03
SNRNP200-202ENST00000429650 VPS54Q9P1Q0 977 aa15.21■□□□□ 0.03
SNRNP200-202ENST00000429650 COL1A1P02452 1464 aaPredicted RBP15.21■□□□□ 0.02
SNRNP200-202ENST00000429650 COL16A1Q07092 1604 aaPredicted RBP15.21■□□□□ 0.02
SNRNP200-202ENST00000429650 DUOX1Q9NRD9 1551 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 ZSCAN12O43309 604 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 AKAP17AQ02040 695 aaKnown RBP15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 FUT2Q10981 343 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 SPECC1LQ69YQ0 1117 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 AATFQ9NY61 560 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 PPP2R2CQ9Y2T4 447 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 LOC102724428A0A0B4J2F2 783 aa15.2■□□□□ 0.02
SNRNP200-202ENST00000429650 VWA3AA6NCI4 1184 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms