RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MYBPC2Q14324 1141 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 VSTM4Q8IW00 320 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 RIN2Q8WYP3 895 aaPredicted RBP9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 P3H4Q92791 437 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 TM6SF1Q9BZW5 370 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 KIAA0232Q92628 1395 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 FMN2Q9NZ56 1722 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 FER1L4A9Z1Z3 1794 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 GOLGA6BA6NDN3 693 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 ABLIM1O14639 778 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 KIF5CO60282 957 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 BUB1BO60566 1050 aaPredicted RBP9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 GNAT1P11488 350 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 ME3Q16798 604 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 CCDC73Q6ZRK6 1079 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 CCDC121Q6ZUS5 278 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 SDR16C5Q8N3Y7 309 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 NUP58Q9BVL2 599 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 XRN1Q8IZH2 1706 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 CTAGE9A4FU28 777 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 FAM160A1Q05DH4 1040 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 NCAPHQ15003 741 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 C8orf58Q8NAV2 365 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 ENGASEQ8NFI3 743 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 NOD2Q9HC29 1040 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 DNAAF2Q9NVR5 837 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 RIPOR2Q9Y4F9 1068 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 MARF1Q9Y4F3 1742 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 NUTM2FA1L443 756 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 ATP6V1G2O95670 118 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 PAX3P23760 479 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 USP14P54578 494 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 MYO1EQ12965 1108 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 DYNC1I2Q13409 638 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 LACTB2Q53H82 288 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 ARHGEF25Q86VW2 580 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 ZNF473Q8WTR7 871 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 CNKSR1Q969H4 720 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 ANKRD27Q96NW4 1050 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 INCENPQ9NQS7 918 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 NPHP4O75161 1426 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 DIP2AQ14689 1571 aa9.97□□□□□ -0.81
CDC42BPA-206ENST00000429440 PIK3C2AO00443 1686 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 RIMS1Q86UR5 1692 aaKnown RBP9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 DNAJC8O75937 253 aaPredicted RBP9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 CCDC175P0C221 793 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 ATP4AP20648 1035 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 CNGA1P29973 690 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 ST3GAL1Q11201 340 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 IFT88Q13099 833 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 TEX9Q8N6V9 391 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 TBC1D31Q96DN5 1066 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 SENP2Q9HC62 589 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 ZFATQ9P243 1243 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 STAP2Q9UGK3 403 aa9.96□□□□□ -0.81
CDC42BPA-206ENST00000429440 SMIM24O75264 130 aa9.96□□□□□ -0.82
CDC42BPA-206ENST00000429440 ANP32DO95626 131 aa9.96□□□□□ -0.82
CDC42BPA-206ENST00000429440 TBX2Q13207 712 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPA-206ENST00000429440 TOGARAM2Q6ZUX3 1019 aa9.96□□□□□ -0.82
CDC42BPA-206ENST00000429440 MOV10L1Q9BXT6 1211 aaKnown RBP9.96□□□□□ -0.82
CDC42BPA-206ENST00000429440 RCOR1Q9UKL0 485 aa9.96□□□□□ -0.82
CDC42BPA-206ENST00000429440 AOX1Q06278 1338 aa9.96□□□□□ -0.82
CDC42BPA-206ENST00000429440 ELL2O00472 640 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 CREB3O43889 395 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 FAM107AO95990 144 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 LSP1P33241 339 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 UBASH3AP57075 661 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 MFSD4BQ5TF39 518 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 STAMBPL1Q96FJ0 436 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 RABEP2Q9H5N1 569 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 TMEM165Q9HC07 324 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 HAUS2Q9NVX0 235 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 NOP53Q9NZM5 478 aaKnown RBP9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 MYO1AQ9UBC5 1043 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 CHD2O14647 1828 aaKnown RBP9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 SH3TC1Q8TE82 1336 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 ATP6V1G1O75348 118 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 NPTXRO95502 500 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 ZNF24P17028 368 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 MYBPC3Q14896 1274 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 GNPTABQ3T906 1256 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 ANKRD20A8PQ5CZ79 823 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 NUGGCQ68CJ6 796 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 FAM114A1Q8IWE2 563 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 NOA1Q8NC60 698 aaKnown RBP9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 RPGRIP1Q96KN7 1286 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 KIAA1468Q9P260 1216 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 ANKIB1Q9P2G1 1089 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 AMOTL2Q9Y2J4 779 aa9.95□□□□□ -0.82
CDC42BPA-206ENST00000429440 RASSF10A6NK89 507 aa9.94□□□□□ -0.82
CDC42BPA-206ENST00000429440 SSBP05455 408 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDC42BPA-206ENST00000429440 GHRP10912 638 aa9.94□□□□□ -0.82
CDC42BPA-206ENST00000429440 TWISTNBQ3B726 338 aaPredicted RBP9.94□□□□□ -0.82
CDC42BPA-206ENST00000429440 ATL3Q6DD88 541 aa9.94□□□□□ -0.82
CDC42BPA-206ENST00000429440 SULT6B1Q6IMI4 303 aa9.94□□□□□ -0.82
CDC42BPA-206ENST00000429440 ZNF570Q96NI8 536 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms