RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ITIH3Q06033 890 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 TRIM6Q9C030 488 aaPredicted RBP14.22□□□□□ -0.13
LDB3-205ENST00000429277 ALDH1B1P30837 517 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 VPS16Q9H269 839 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 COL17A1Q9UMD9 1497 aaPredicted RBP14.22□□□□□ -0.13
LDB3-205ENST00000429277 CCDC160A6NGH7 325 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 HMGB1P1B2RPK0 211 aaPredicted RBP14.22□□□□□ -0.13
LDB3-205ENST00000429277 KCNA6P17658 529 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 IL13P35225 146 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 ARHGAP24Q8N264 748 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
LDB3-205ENST00000429277 KIAA0232Q92628 1395 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 PPP2R5EQ16537 467 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 HERC4Q5GLZ8 1057 aaPredicted RBP14.22□□□□□ -0.13
LDB3-205ENST00000429277 C10orf67Q8IYJ2 551 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 PARP2Q9UGN5 583 aa14.22□□□□□ -0.13
LDB3-205ENST00000429277 POLR2DO15514 142 aaKnown RBP14.21□□□□□ -0.13
LDB3-205ENST00000429277 CALCRLQ16602 461 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 NCAPH2Q6IBW4 605 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 SPATA5Q8NB90 893 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 AFAP1L1Q8TED9 768 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 H0YCG3 227 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 M0QZ92 97 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 RSRC1Q96IZ7 334 aaKnown RBP14.21□□□□□ -0.13
LDB3-205ENST00000429277 PLCB1Q9NQ66 1216 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 HARSP12081 509 aaKnown RBP14.21□□□□□ -0.13
LDB3-205ENST00000429277 TERF1P54274 439 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 PAK2Q13177 524 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 CHURC1Q8WUH1 139 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 ATP8A2Q9NTI2 1148 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 LMTK3Q96Q04 1460 aa14.21□□□□□ -0.13
LDB3-205ENST00000429277 CHMP2AO43633 222 aa14.21□□□□□ -0.14
LDB3-205ENST00000429277 NLRX1Q86UT6 975 aa14.21□□□□□ -0.14
LDB3-205ENST00000429277 CACNA2D3Q8IZS8 1091 aa14.21□□□□□ -0.14
LDB3-205ENST00000429277 KDM2BQ8NHM5 1336 aa14.21□□□□□ -0.14
LDB3-205ENST00000429277 SSH2Q76I76 1423 aa14.21□□□□□ -0.14
LDB3-205ENST00000429277 EXOC3O60645 756 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 GCKRQ14397 625 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 OTUD6AQ7L8S5 288 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 GPATCH11Q8N954 259 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 HAUS7Q99871 368 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 SLC5A4Q9NY91 659 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 PODXL2Q9NZ53 605 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 CTTNBP2NLQ9P2B4 639 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 MAGEA1P43355 309 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 TNFAIP1Q13829 316 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 RASA3Q14644 834 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 GEN1Q17RS7 908 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 KRT24Q2M2I5 525 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 BIN2Q9UBW5 565 aaPredicted RBP14.2□□□□□ -0.14
LDB3-205ENST00000429277 ZNF202O95125 648 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 GTF2A1P52655 376 aaPredicted RBP14.2□□□□□ -0.14
LDB3-205ENST00000429277 ATP11AP98196 1134 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 POSTNQ15063 836 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 DCUN1D2Q6PH85 259 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 REXO1Q8N1G1 1221 aaKnown RBP14.2□□□□□ -0.14
LDB3-205ENST00000429277 GOLGA5Q8TBA6 731 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 CARD14Q9BXL6 1004 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 ERVV-2B6SEH9 535 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 VIMP08670 466 aaKnown RBP14.2□□□□□ -0.14
LDB3-205ENST00000429277 ATP5JP18859 108 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 KRT9P35527 623 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 KRT40Q6A162 431 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 LARGE2Q8N3Y3 721 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 GRM1Q13255 1194 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 TTC31Q49AM3 519 aaPredicted RBP14.2□□□□□ -0.14
LDB3-205ENST00000429277 GALNT17Q6IS24 598 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 CABP7Q86V35 215 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 ZNF710Q8N1W2 664 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 TTC16Q8NEE8 873 aa14.2□□□□□ -0.14
LDB3-205ENST00000429277 ERBB4Q15303 1308 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 CFAP221Q4G0U5 840 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 AS3MTQ9HBK9 375 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 PKD2L1Q9P0L9 805 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 GJA3Q9Y6H8 435 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 MAPKBP1O60336 1514 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 NEDD9Q14511 834 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 UTP14CQ5TAP6 766 aaKnown RBP14.19□□□□□ -0.14
LDB3-205ENST00000429277 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 KLHL30Q0D2K2 578 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 GNPTABQ3T906 1256 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 PPP1R21Q6ZMI0 780 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 MYCT1Q8N699 235 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 FLAD1Q8NFF5 587 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 MIS12Q9H081 205 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 ZNF75DP51815 510 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 UAP1Q16222 522 aaPredicted RBP14.19□□□□□ -0.14
LDB3-205ENST00000429277 SFMBT2Q5VUG0 894 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 VCX3BQ9H321 246 aa14.19□□□□□ -0.14
LDB3-205ENST00000429277 N4BP1O75113 896 aaKnown RBP14.18□□□□□ -0.14
LDB3-205ENST00000429277 CEP57Q86XR8 500 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 PCP11498 1178 aaKnown RBP14.18□□□□□ -0.14
LDB3-205ENST00000429277 KIF11P52732 1056 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 AATFQ9NY61 560 aaKnown RBP eCLIP14.18□□□□□ -0.14
LDB3-205ENST00000429277 USH1CQ9Y6N9 552 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 MYCLP12524 364 aaPredicted RBP14.18□□□□□ -0.14
LDB3-205ENST00000429277 ZNF445P59923 1031 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 G2E3Q7L622 706 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 RAB17Q9H0T7 212 aa14.18□□□□□ -0.14
LDB3-205ENST00000429277 ASIC3Q9UHC3 531 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms