RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PKP1Q13835 747 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 ANKRD1Q15327 319 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 RCSD1Q6JBY9 416 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 CLEC10AQ8IUN9 316 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 OGFOD1Q8N543 542 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 ENAHQ8N8S7 591 aaPredicted RBP10.45□□□□□ -0.74
SMC6-204ENST00000428868 ESR2Q92731 530 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 DPF2Q92785 391 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 ZSCAN31Q96LW9 406 aaPredicted RBP10.45□□□□□ -0.74
SMC6-204ENST00000428868 IL17RBQ9NRM6 502 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 NAP1L2Q9ULW6 460 aaPredicted RBP10.45□□□□□ -0.74
SMC6-204ENST00000428868 ANGEL1Q9UNK9 670 aaKnown RBP10.45□□□□□ -0.74
SMC6-204ENST00000428868 SMCHD1A6NHR9 2005 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 GOLGA8BA8MQT2 603 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 GRIN3BO60391 1043 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 CTDNEP1O95476 244 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 SLC3A2P08195 630 aaKnown RBP10.44□□□□□ -0.74
SMC6-204ENST00000428868 AKR1B1P15121 316 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 HSPA6P17066 643 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 TFAP4Q01664 338 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 PDE4BQ07343 736 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 RRP1BQ14684 758 aaKnown RBP10.44□□□□□ -0.74
SMC6-204ENST00000428868 KIF4BQ2VIQ3 1234 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 APOA5Q6Q788 366 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 RASGRP2Q7LDG7 609 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 AMOTL1Q8IY63 956 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 CCDC144CPQ8IYA2 1237 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 GPC2Q8N158 579 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 TMEM87BQ96K49 555 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 ZSCAN10Q96SZ4 725 aaPredicted RBP10.44□□□□□ -0.74
SMC6-204ENST00000428868 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMC6-204ENST00000428868 TMEM39BQ9GZU3 492 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 SH2B1Q9NRF2 756 aaPredicted RBP10.44□□□□□ -0.74
SMC6-204ENST00000428868 GPRC5DQ9NZD1 345 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 PGAP2Q9UHJ9 254 aa10.44□□□□□ -0.74
SMC6-204ENST00000428868 PLIN4Q96Q06 1357 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 TSPY2A6NKD2 308 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 ENTPD3O75355 529 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 NPM3O75607 178 aaKnown RBP10.43□□□□□ -0.74
SMC6-204ENST00000428868 PCP11498 1178 aaKnown RBP10.43□□□□□ -0.74
SMC6-204ENST00000428868 CDC27P30260 824 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 HIRAP54198 1017 aaPredicted RBP10.43□□□□□ -0.74
SMC6-204ENST00000428868 JAG1P78504 1218 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 WTAPQ15007 396 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 TTC6Q86TZ1 520 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 SGMS1Q86VZ5 419 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 MICU3Q86XE3 530 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 ZSCAN29Q8IWY8 852 aaPredicted RBP10.43□□□□□ -0.74
SMC6-204ENST00000428868 ZNF274Q96GC6 653 aaPredicted RBP10.43□□□□□ -0.74
SMC6-204ENST00000428868 INTS4Q96HW7 963 aaKnown RBP10.43□□□□□ -0.74
SMC6-204ENST00000428868 MKNK2Q9HBH9 465 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 GPBP1L1Q9HC44 474 aaPredicted RBP10.43□□□□□ -0.74
SMC6-204ENST00000428868 FAM217BQ9NTX9 383 aaPredicted RBP10.43□□□□□ -0.74
SMC6-204ENST00000428868 TMOD2Q9NZR1 351 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 SERPINB13Q9UIV8 391 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 HACL1Q9UJ83 578 aa10.43□□□□□ -0.74
SMC6-204ENST00000428868 NID2Q14112 1375 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 HLA-DOAP06340 250 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 GJB2P29033 226 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 LIFRP42702 1097 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 NFXL1Q6ZNB6 911 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 ZNF654Q8IZM8 581 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 NSUN7Q8NE18 718 aaKnown RBP10.42□□□□□ -0.74
SMC6-204ENST00000428868 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 FAM151AQ8WW52 585 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 CHMP4CQ96CF2 233 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 UBAC1Q9BSL1 405 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 EHD4Q9H223 541 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 ZDHHC9Q9Y397 364 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 SSC5DA1L4H1 1573 aa10.42□□□□□ -0.74
SMC6-204ENST00000428868 COL11A1P12107 1806 aaPredicted RBP10.42□□□□□ -0.74
SMC6-204ENST00000428868 IGKV6D-41A0A0C4DH26 115 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 CCDC69A6NI79 296 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 GOLGA8AA7E2F4 631 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 UBE2Q2LH0YL09 131 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 ZBTB43O43298 467 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 GDF11O95390 407 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 TSPY3P0CV98 308 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 TSPY8P0CW00 308 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 ADD1P35611 737 aaKnown RBP10.41□□□□□ -0.74
SMC6-204ENST00000428868 IFIT1BQ5T764 474 aaKnown RBP10.41□□□□□ -0.74
SMC6-204ENST00000428868 ANGEL2Q5VTE6 544 aaKnown RBP10.41□□□□□ -0.74
SMC6-204ENST00000428868 DLK2Q6UY11 383 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 METTL16Q86W50 562 aaKnown RBP10.41□□□□□ -0.74
SMC6-204ENST00000428868 ZNF444Q8N0Y2 327 aaPredicted RBP10.41□□□□□ -0.74
SMC6-204ENST00000428868 NEDD1Q8NHV4 660 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 SMARCC2Q8TAQ2 1214 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 DDX11Q96FC9 970 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 CEP95Q96GE4 821 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 CHAMP1Q96JM3 812 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 TEPSINQ96N21 525 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 CSRNP1Q96S65 589 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 DHX36Q9H2U1 1008 aaKnown RBP10.41□□□□□ -0.74
SMC6-204ENST00000428868 CHMP5Q9NZZ3 219 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.41□□□□□ -0.74
SMC6-204ENST00000428868 SMC3Q9UQE7 1217 aa10.41□□□□□ -0.74
SMC6-204ENST00000428868 ERICH2A1L162 156 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 PTPDC1A2A3K4 754 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 H7C1D1 291 aa10.4□□□□□ -0.74
SMC6-204ENST00000428868 MYO1BO43795 1136 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms