RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SPATA20Q8TB22 786 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 FAM89AQ96GI7 184 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 WDR24Q96S15 920 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 STRBPQ96SI9 672 aaKnown RBP10.08□□□□□ -0.8
CDH13-202ENST00000428848 BAG1Q99933 345 aaPredicted RBP10.08□□□□□ -0.8
CDH13-202ENST00000428848 MRFAP1Q9Y605 127 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 TACC3Q9Y6A5 838 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 MMP1P03956 469 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 PDE6AP16499 860 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 CASQ1P31415 396 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 IL6STP40189 918 aaPredicted RBP10.08□□□□□ -0.8
CDH13-202ENST00000428848 POSTNQ15063 836 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 SPECC1LQ69YQ0 1117 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 FNBP4Q8N3X1 1017 aaPredicted RBP10.08□□□□□ -0.8
CDH13-202ENST00000428848 GPR161Q8N6U8 529 aaKnown RBP10.08□□□□□ -0.8
CDH13-202ENST00000428848 TRIML1Q8N9V2 468 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
CDH13-202ENST00000428848 TRERF1Q96PN7 1200 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 BRMS1Q9HCU9 246 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 ZNF532Q9HCE3 1301 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 LRP5O75197 1615 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 BCORQ6W2J9 1755 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 MYO1CO00159 1063 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 SASH3O75995 380 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 TBC1D8O95759 1140 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 PRR29P0C7W0 189 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 GRIN1Q05586 938 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 SSRP1Q08945 709 aaKnown RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 GNL2Q13823 731 aaKnown RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 TRIM29Q14134 588 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 NR1I3Q14994 352 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 METTL24Q5JXM2 366 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 CCDC85AQ96PX6 553 aaPredicted RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 FOXP1Q9H334 677 aaPredicted RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 EPB41L4AQ9HCS5 686 aaPredicted RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 NFE2L3Q9Y4A8 694 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 ITGB4P16144 1822 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 ANKRD18BA2A2Z9 1011 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 BTBD18B2RXH4 712 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 PATL2C9JE40 543 aaKnown RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 APPP05067 770 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 CYP19A1P11511 503 aaPredicted RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 ITGA6P23229 1130 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 GUCY1A2P33402 732 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 TMEM67Q5HYA8 995 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 CC2D1AQ6P1N0 951 aaPredicted RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 TOGARAM2Q6ZUX3 1019 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 APTXQ7Z2E3 356 aaKnown RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 GOLGA6L1Q8N7Z2 621 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 IQUBQ8NA54 791 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 NEK11Q8NG66 645 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 WASF1Q92558 559 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 SLC26A6Q9BXS9 759 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 PSD3Q9NYI0 1048 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 ZSWIM5Q9P217 1185 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 SERTAD1Q9UHV2 236 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 HOOK1Q9UJC3 728 aaKnown RBP10.07□□□□□ -0.8
CDH13-202ENST00000428848 WWC3Q9ULE0 1092 aa10.07□□□□□ -0.8
CDH13-202ENST00000428848 A0A1B0GTH6 734 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 ACTN4O43707 911 aaKnown RBP10.06□□□□□ -0.8
CDH13-202ENST00000428848 SEC31AO94979 1220 aaKnown RBP10.06□□□□□ -0.8
CDH13-202ENST00000428848 PDE8BO95263 885 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 ERCC5P28715 1186 aaPredicted RBP10.06□□□□□ -0.8
CDH13-202ENST00000428848 PSEN1P49768 467 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 ZSCAN26Q16670 478 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 RILPL1Q5EBL4 403 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 CT47A1Q5JQC4 288 aaPredicted RBP10.06□□□□□ -0.8
CDH13-202ENST00000428848 SPECC1Q5M775 1068 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 ICE2Q659A1 982 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 LDHAL6AQ6ZMR3 332 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 DIS3L2Q8IYB7 885 aaKnown RBP10.06□□□□□ -0.8
CDH13-202ENST00000428848 IFNL3Q8IZI9 196 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 SYNE4Q8N205 404 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 GOLGA5Q8TBA6 731 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 MYL10Q9BUA6 226 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 GREM2Q9H772 168 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 INCENPQ9NQS7 918 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 DACH1Q9UI36 760 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 TRPC5Q9UL62 973 aaPredicted RBP10.06□□□□□ -0.8
CDH13-202ENST00000428848 TBC1D2BQ9UPU7 963 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 SRPRBQ9Y5M8 271 aaKnown RBP10.06□□□□□ -0.8
CDH13-202ENST00000428848 NUP98P52948 1817 aa10.06□□□□□ -0.8
CDH13-202ENST00000428848 FGFR2P21802 821 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 PBX1P40424 430 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 PHKA1P46020 1223 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 ADKP55263 362 aaKnown RBP10.05□□□□□ -0.8
CDH13-202ENST00000428848 GNG11P61952 73 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 PPP2R3AQ06190 1150 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 NFXL1Q6ZNB6 911 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 RABGGTAQ92696 567 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 MTA3Q9BTC8 594 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 EPC1Q9H2F5 836 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 RAI14Q9P0K7 980 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 SLC12A7Q9Y666 1083 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 POLR2DO15514 142 aaKnown RBP10.05□□□□□ -0.8
CDH13-202ENST00000428848 PDE8AO60658 829 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 IDH1O75874 414 aaKnown RBP10.05□□□□□ -0.8
CDH13-202ENST00000428848 UQCRFS1P1P0C7P4 283 aa10.05□□□□□ -0.8
CDH13-202ENST00000428848 PLCD1P51178 756 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms