RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 GTF3C6Q969F1 213 aa14.18□□□□□ -0.14
RFC4-206ENST00000427785 MYL10Q9BUA6 226 aa14.18□□□□□ -0.14
RFC4-206ENST00000427785 SERPINB13Q9UIV8 391 aa14.18□□□□□ -0.14
RFC4-206ENST00000427785 PLIN4Q96Q06 1357 aa14.18□□□□□ -0.14
RFC4-206ENST00000427785 H7C1D1 291 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 GRIN3BO60391 1043 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 TSPY3P0CV98 308 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 TSPY8P0CW00 308 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 RXRAP19793 462 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 SHMT1P34896 483 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 EPS15P42566 896 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 CCT2P78371 535 aaKnown RBP14.17□□□□□ -0.14
RFC4-206ENST00000427785 TFAP4Q01664 338 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 SCRN1Q12765 414 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 SEC23AQ15436 765 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 APOA5Q6Q788 366 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 MICU3Q86XE3 530 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 IQCA1Q86XH1 822 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 CRACR2BQ8N4Y2 399 aaPredicted RBP14.17□□□□□ -0.14
RFC4-206ENST00000427785 ENAHQ8N8S7 591 aaPredicted RBP14.17□□□□□ -0.14
RFC4-206ENST00000427785 ZSCAN10Q96SZ4 725 aaPredicted RBP14.17□□□□□ -0.14
RFC4-206ENST00000427785 TRIM34Q9BYJ4 488 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 TMEM39BQ9GZU3 492 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 EHD4Q9H223 541 aa14.17□□□□□ -0.14
RFC4-206ENST00000427785 DHX36Q9H2U1 1008 aaKnown RBP14.17□□□□□ -0.14
RFC4-206ENST00000427785 NCOA5Q9HCD5 579 aaKnown RBP14.17□□□□□ -0.14
RFC4-206ENST00000427785 BAZ2BQ9UIF8 2168 aaKnown RBP14.17□□□□□ -0.14
RFC4-206ENST00000427785 CCDC69A6NI79 296 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 PFKFB2O60825 505 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 AKR1B1P15121 316 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 LMOD1P29536 600 aaPredicted RBP14.16□□□□□ -0.14
RFC4-206ENST00000427785 PDIA3P30101 505 aaKnown RBP14.16□□□□□ -0.14
RFC4-206ENST00000427785 DDIT3P35638 169 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 MMP14P50281 582 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 ZNF444Q8N0Y2 327 aaPredicted RBP14.16□□□□□ -0.14
RFC4-206ENST00000427785 FAM151AQ8WW52 585 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 CSRNP1Q96S65 589 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 ZNF287Q9HBT7 754 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 GGA3Q9NZ52 723 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 SWAP70Q9UH65 585 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 HACL1Q9UJ83 578 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 HPS5Q9UPZ3 1129 aa14.16□□□□□ -0.14
RFC4-206ENST00000427785 PAPPA2Q9BXP8 1791 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 GOLGA8AA7E2F4 631 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 LIFRP42702 1097 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 EVCP57679 992 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 SHROOM1Q2M3G4 852 aaPredicted RBP14.15□□□□□ -0.14
RFC4-206ENST00000427785 IFIT1BQ5T764 474 aaKnown RBP14.15□□□□□ -0.14
RFC4-206ENST00000427785 FKBP1CQ5VVH2 108 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 SGMS1Q86VZ5 419 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 CLEC10AQ8IUN9 316 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 CCDC144CPQ8IYA2 1237 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 ZNF274Q96GC6 653 aaPredicted RBP14.15□□□□□ -0.14
RFC4-206ENST00000427785 INTS4Q96HW7 963 aaKnown RBP14.15□□□□□ -0.14
RFC4-206ENST00000427785 MTA3Q9BTC8 594 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 PI4KBQ9UBF8 816 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 TCHHQ07283 1943 aa14.15□□□□□ -0.14
RFC4-206ENST00000427785 NID2Q14112 1375 aa14.14□□□□□ -0.15
RFC4-206ENST00000427785 ZBTB43O43298 467 aa14.14□□□□□ -0.15
RFC4-206ENST00000427785 JAK2O60674 1132 aa14.14□□□□□ -0.15
RFC4-206ENST00000427785 TNNI2P48788 182 aa14.14□□□□□ -0.15
RFC4-206ENST00000427785 METAP2P50579 478 aaKnown RBP eCLIP14.14□□□□□ -0.15
RFC4-206ENST00000427785 ANGEL2Q5VTE6 544 aaKnown RBP14.14□□□□□ -0.15
RFC4-206ENST00000427785 FAM83AQ86UY5 434 aa14.14□□□□□ -0.15
RFC4-206ENST00000427785 ZNF654Q8IZM8 581 aa14.14□□□□□ -0.15
RFC4-206ENST00000427785 IL17RBQ9NRM6 502 aa14.14□□□□□ -0.15
RFC4-206ENST00000427785 SMC3Q9UQE7 1217 aa14.14□□□□□ -0.15
RFC4-206ENST00000427785 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.14□□□□□ -0.15
RFC4-206ENST00000427785 SLC12A7Q9Y666 1083 aa14.14□□□□□ -0.15
RFC4-206ENST00000427785 ZC3H4Q9UPT8 1303 aaKnown RBP14.14□□□□□ -0.15
RFC4-206ENST00000427785 PTPDC1A2A3K4 754 aa14.13□□□□□ -0.15
RFC4-206ENST00000427785 MPHOSPH10O00566 681 aaKnown RBP14.13□□□□□ -0.15
RFC4-206ENST00000427785 PPFIA3O75145 1194 aa14.13□□□□□ -0.15
RFC4-206ENST00000427785 GDF11O95390 407 aa14.13□□□□□ -0.15
RFC4-206ENST00000427785 GJB2P29033 226 aa14.13□□□□□ -0.15
RFC4-206ENST00000427785 HIRAP54198 1017 aaPredicted RBP14.13□□□□□ -0.15
RFC4-206ENST00000427785 TNFAIP1Q13829 316 aa14.13□□□□□ -0.15
RFC4-206ENST00000427785 RASA3Q14644 834 aa14.13□□□□□ -0.15
RFC4-206ENST00000427785 RCSD1Q6JBY9 416 aa14.13□□□□□ -0.15
RFC4-206ENST00000427785 NEDD1Q8NHV4 660 aa14.13□□□□□ -0.15
RFC4-206ENST00000427785 NUP133Q8WUM0 1156 aa14.13□□□□□ -0.15
RFC4-206ENST00000427785 PHIPQ8WWQ0 1821 aa14.13□□□□□ -0.15
RFC4-206ENST00000427785 CTDNEP1O95476 244 aa14.12□□□□□ -0.15
RFC4-206ENST00000427785 NT5C2P49902 561 aa14.12□□□□□ -0.15
RFC4-206ENST00000427785 SYNE3Q6ZMZ3 975 aa14.12□□□□□ -0.15
RFC4-206ENST00000427785 APOBEC3FQ8IUX4 373 aaKnown RBP14.12□□□□□ -0.15
RFC4-206ENST00000427785 NSUN7Q8NE18 718 aaKnown RBP14.12□□□□□ -0.15
RFC4-206ENST00000427785 CEP95Q96GE4 821 aa14.12□□□□□ -0.15
RFC4-206ENST00000427785 L3MBTL3Q96JM7 780 aaPredicted RBP14.12□□□□□ -0.15
RFC4-206ENST00000427785 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.12□□□□□ -0.15
RFC4-206ENST00000427785 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.12□□□□□ -0.15
RFC4-206ENST00000427785 ADARB2Q9NS39 739 aaKnown RBP14.12□□□□□ -0.15
RFC4-206ENST00000427785 CHMP5Q9NZZ3 219 aa14.12□□□□□ -0.15
RFC4-206ENST00000427785 SSC5DA1L4H1 1573 aa14.12□□□□□ -0.15
RFC4-206ENST00000427785 DDAH1O94760 285 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 CDC27P30260 824 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 PKP1Q13835 747 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 RRP1BQ14684 758 aaKnown RBP14.11□□□□□ -0.15
RFC4-206ENST00000427785 RTN1Q16799 776 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 DPY19L2Q6NUT2 758 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms