RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 SDF4Q9BRK5 362 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 NOL10Q9BSC4 688 aaKnown RBP16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 RNF26Q9BY78 433 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 RBM28Q9NW13 759 aaKnown RBP16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 MROH7-TTC4A0A0A0MT08 1334 aa16.18■□□□□ 0.18
APOBEC3D-202ENST00000427494 PPP6R2O75170 966 aa16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 CMA1P23946 247 aa16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 DIXDC1Q155Q3 683 aa16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 C11orf57Q6ZUT1 292 aaPredicted RBP16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 CD209Q9NNX6 404 aa16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 ZNF500O60304 480 aaPredicted RBP16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 NMT2O60551 498 aa16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 BBOX1O75936 387 aa16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 DDAH1O94760 285 aa16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 BAG3O95817 575 aa16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 PFKFB1P16118 471 aa16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 HOXA10P31260 410 aaPredicted RBP16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 PROM2Q8N271 834 aa16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 FOXP1Q9H334 677 aaPredicted RBP16.17■□□□□ 0.18
APOBEC3D-202ENST00000427494 TSPY2A6NKD2 308 aa16.16■□□□□ 0.18
APOBEC3D-202ENST00000427494 ZNF202O95125 648 aa16.16■□□□□ 0.18
APOBEC3D-202ENST00000427494 PLEKHA8P1O95397 391 aa16.16■□□□□ 0.18
APOBEC3D-202ENST00000427494 LDHCP07864 332 aa16.16■□□□□ 0.18
APOBEC3D-202ENST00000427494 TROAPQ12815 778 aa16.16■□□□□ 0.18
APOBEC3D-202ENST00000427494 ERCC4Q92889 916 aaPredicted RBP16.16■□□□□ 0.18
APOBEC3D-202ENST00000427494 ANO10Q9NW15 660 aa16.16■□□□□ 0.18
APOBEC3D-202ENST00000427494 LRRC37AA6NMS7 1700 aa16.16■□□□□ 0.18
APOBEC3D-202ENST00000427494 IL1R1P14778 569 aa16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 CRAMP1Q96RY5 1269 aa16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 ANKRD31Q8N7Z5 1873 aa16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 CDK5RAP2Q96SN8 1893 aa16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 A0A087WWV3 80 aa16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 PRPF3O43395 683 aaKnown RBP16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 XBP1P17861 261 aa16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 FUT2Q10981 343 aa16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 C12orf60Q5U649 245 aa16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 PODXL2Q9NZ53 605 aa16.15■□□□□ 0.18
APOBEC3D-202ENST00000427494 LTBP1Q14766 1721 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 hCG_1642624A0A1W2PR95 340 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 GOLGA6L19H0YKK7 550 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 CUTAO60888 179 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 HMGB2P26583 209 aaKnown RBP16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 PPP4CP60510 307 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 NR5A1Q13285 461 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 IQCB1Q15051 598 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 PKN1Q16512 942 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 TMTC3Q6ZXV5 915 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 AMOTL1Q8IY63 956 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 CTCFLQ8NI51 663 aaPredicted RBP16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 TBC1D16Q8TBP0 767 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 ZNF830Q96NB3 372 aaPredicted RBP16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 RTFDC1Q9BY42 306 aaPredicted RBP16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 POLLQ9UGP5 575 aa16.14■□□□□ 0.17
APOBEC3D-202ENST00000427494 KLRG2A4D1S0 409 aaPredicted RBP16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 C6orf229H3BNL8 230 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 PPEF1O14829 653 aaPredicted RBP16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 TOB1P50616 345 aaPredicted RBP16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 ZNF827Q17R98 1081 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 RILPL1Q5EBL4 403 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 SHC4Q6S5L8 630 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 SPC24Q8NBT2 197 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 OXER1Q8TDS5 423 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 TGFBRAP1Q8WUH2 860 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 DYNLL2Q96FJ2 89 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 CLIC6Q96NY7 704 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 VPS54Q9P1Q0 977 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 KIAA1468Q9P260 1216 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 V9GY48 417 aaPredicted RBP16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 ROBO3Q96MS0 1386 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 BTDP43251 543 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 SYKP43405 635 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 RESP18Q5W5W9 173 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 CEP57L1Q8IYX8 460 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 FBXW7Q969H0 707 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 SHISA4Q96DD7 197 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 HPSEQ9Y251 543 aa16.13■□□□□ 0.17
APOBEC3D-202ENST00000427494 EP400Q96L91 3159 aa16.12■□□□□ 0.17
APOBEC3D-202ENST00000427494 CNTNAP5Q8WYK1 1306 aa16.12■□□□□ 0.17
APOBEC3D-202ENST00000427494 GOLGA6L6A8MZA4 724 aa16.12■□□□□ 0.17
APOBEC3D-202ENST00000427494 TFAP4Q01664 338 aa16.12■□□□□ 0.17
APOBEC3D-202ENST00000427494 ZRSR1Q15695 479 aaKnown RBP16.12■□□□□ 0.17
APOBEC3D-202ENST00000427494 KRI1Q8N9T8 703 aaKnown RBP16.12■□□□□ 0.17
APOBEC3D-202ENST00000427494 TRIM5Q9C035 493 aa16.12■□□□□ 0.17
APOBEC3D-202ENST00000427494 TTC12Q9H892 705 aaPredicted RBP16.12■□□□□ 0.17
APOBEC3D-202ENST00000427494 BECN2A8MW95 431 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 KRT2P35908 639 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 ZNF75DP51815 510 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 KIAA2012Q0VF49 1180 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 MFSD14BQ5SR56 506 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 TMC4Q7Z404 712 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 PLA2G4DQ86XP0 818 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 CERS3Q8IU89 383 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 MAPKAPK5Q8IW41 473 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 SRBD1Q8N5C6 995 aaKnown RBP16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 TIGD1Q96MW7 591 aa16.11■□□□□ 0.17
APOBEC3D-202ENST00000427494 NAP1L5Q96NT1 182 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms