RNA–Protein interactions for RNA: ENST00000427445.6

TPTE-201, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-201ENST00000427445 SPAG1Q07617 926 aa11.28□□□□□ -0.6
TPTE-201ENST00000427445 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
TPTE-201ENST00000427445 ISM2Q6H9L7 571 aa11.28□□□□□ -0.6
TPTE-201ENST00000427445 PPFIBP1Q86W92 1011 aa11.28□□□□□ -0.6
TPTE-201ENST00000427445 RAB11FIP4Q86YS3 637 aa11.28□□□□□ -0.6
TPTE-201ENST00000427445 CNGA4Q8IV77 575 aa11.28□□□□□ -0.6
TPTE-201ENST00000427445 CRACR2BQ8N4Y2 399 aaPredicted RBP11.28□□□□□ -0.6
TPTE-201ENST00000427445 PRDM11Q9NQV5 511 aa11.28□□□□□ -0.6
TPTE-201ENST00000427445 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.28□□□□□ -0.6
TPTE-201ENST00000427445 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
TPTE-201ENST00000427445 PLCH1Q4KWH8 1693 aa11.27□□□□□ -0.6
TPTE-201ENST00000427445 POLR2DO15514 142 aaKnown RBP11.27□□□□□ -0.61
TPTE-201ENST00000427445 TOB1P50616 345 aaPredicted RBP11.27□□□□□ -0.61
TPTE-201ENST00000427445 MUM1L1Q5H9M0 696 aa11.27□□□□□ -0.61
TPTE-201ENST00000427445 PI16Q6UXB8 463 aa11.27□□□□□ -0.61
TPTE-201ENST00000427445 SPATA5Q8NB90 893 aa11.27□□□□□ -0.61
TPTE-201ENST00000427445 LRRN4CLQ8ND94 238 aa11.27□□□□□ -0.61
TPTE-201ENST00000427445 GREM2Q9H772 168 aa11.27□□□□□ -0.61
TPTE-201ENST00000427445 SERTAD1Q9UHV2 236 aa11.27□□□□□ -0.61
TPTE-201ENST00000427445 TTF2Q9UNY4 1162 aaKnown RBP11.27□□□□□ -0.61
TPTE-201ENST00000427445 TRIM75PA6NK02 468 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 BTBD18B2RXH4 712 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 IRS4O14654 1257 aaPredicted RBP11.26□□□□□ -0.61
TPTE-201ENST00000427445 NPHP1O15259 732 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 KIF5CO60282 957 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 IGSF3O75054 1194 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 PBX1P40424 430 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 SRGAP1Q7Z6B7 1085 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 SH3RF1Q7Z6J0 888 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 PDILTQ8N807 584 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 CABLES1Q8TDN4 633 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 EPB41L4AQ9HCS5 686 aaPredicted RBP11.26□□□□□ -0.61
TPTE-201ENST00000427445 STRN4Q9NRL3 753 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 ANAPC4Q9UJX5 808 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 BCL9LQ86UU0 1499 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 MYO5AQ9Y4I1 1855 aaKnown RBP11.26□□□□□ -0.61
TPTE-201ENST00000427445 ERLIN1O75477 346 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 TBC1D8O95759 1140 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 CALM1P0DP23 149 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 CALM2P0DP24 149 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 CALM3P0DP25 149 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 USP5P45974 858 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 PHKA1P46020 1223 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 NT5C2P49902 561 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 AKAP17AQ02040 695 aaKnown RBP11.26□□□□□ -0.61
TPTE-201ENST00000427445 FMR1Q06787 632 aaKnown RBP eCLIP11.26□□□□□ -0.612e-6■■■■□ 22.7
TPTE-201ENST00000427445 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 RASGRP2Q7LDG7 609 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 BRMS1Q9HCU9 246 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 RBM28Q9NW13 759 aaKnown RBP11.26□□□□□ -0.61
TPTE-201ENST00000427445 WWC3Q9ULE0 1092 aa11.26□□□□□ -0.61
TPTE-201ENST00000427445 GSG1L2A8MUP6 293 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 FANCGO15287 622 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 MBD4O95243 580 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 RXRAP19793 462 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 GTF2E1P29083 439 aaPredicted RBP11.25□□□□□ -0.61
TPTE-201ENST00000427445 TMTC1Q8IUR5 882 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 FANCBQ8NB91 859 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 WDR24Q96S15 920 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 CDC23Q9UJX2 597 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 RAB21Q9UL25 225 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 ADGRG1Q9Y653 693 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 SYNRGQ9UMZ2 1314 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 ABCA3Q99758 1704 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 EIF3JO75822 258 aaKnown RBP11.25□□□□□ -0.61
TPTE-201ENST00000427445 TRAPPC10P48553 1259 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 SLC20A2Q08357 652 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 CUL4BQ13620 913 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
TPTE-201ENST00000427445 TOGARAM2Q6ZUX3 1019 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 ZNF654Q8IZM8 581 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 MSANTD4Q8NCY6 345 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 ANKRD20A12PQ8NF67 263 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
TPTE-201ENST00000427445 EXOC4Q96A65 974 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 UBAC1Q9BSL1 405 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 SENP2Q9HC62 589 aa11.25□□□□□ -0.61
TPTE-201ENST00000427445 ADD3Q9UEY8 706 aaKnown RBP11.25□□□□□ -0.61
TPTE-201ENST00000427445 STRCP1A6NGW2 1772 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 MYH6P13533 1939 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 LRRC10BA6NIK2 292 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 DISP2A7MBM2 1401 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 MAP2K7O14733 419 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 PRPF3O43395 683 aaKnown RBP11.24□□□□□ -0.61
TPTE-201ENST00000427445 MFAP3LO75121 409 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 KRT2P35908 639 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 TDO2P48775 406 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 NUP98P52948 1817 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 CHMP4BP1P59074 171 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 PIP4K2BP78356 416 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 WHAMMP3Q1A5X7 153 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 APTXQ7Z2E3 356 aaKnown RBP11.24□□□□□ -0.61
TPTE-201ENST00000427445 DNAJC10Q8IXB1 793 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 MAGEB6Q8N7X4 407 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 IGSF22Q8N9C0 903 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 ESR2Q92731 530 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 PARD6BQ9BYG5 372 aa11.24□□□□□ -0.61
TPTE-201ENST00000427445 CWC15Q9P013 229 aaKnown RBP11.24□□□□□ -0.61
TPTE-201ENST00000427445 TRMT112Q9UI30 125 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms