RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 TOB1P50616 345 aaPredicted RBP22.17■■□□□ 1.14
SNX17-202ENST00000427123 AATFQ9NY61 560 aaKnown RBP eCLIP22.17■■□□□ 1.14
SNX17-202ENST00000427123 ARPP21Q9UBL0 812 aaPredicted RBP22.17■■□□□ 1.14
SNX17-202ENST00000427123 TUBE1Q9UJT0 475 aa22.17■■□□□ 1.14
SNX17-202ENST00000427123 XBP1P17861 261 aa22.16■■□□□ 1.14
SNX17-202ENST00000427123 PRDX5P30044 214 aa22.16■■□□□ 1.14
SNX17-202ENST00000427123 RFC4P35249 363 aa22.16■■□□□ 1.14
SNX17-202ENST00000427123 SPTY2D1Q68D10 685 aaPredicted RBP22.16■■□□□ 1.14
SNX17-202ENST00000427123 CLIC6Q96NY7 704 aa22.16■■□□□ 1.14
SNX17-202ENST00000427123 DCP1AQ9NPI6 582 aaPredicted RBP22.16■■□□□ 1.14
SNX17-202ENST00000427123 TPM4P67936 248 aa22.16■■□□□ 1.14
SNX17-202ENST00000427123 LRMPQ12912 555 aa22.16■■□□□ 1.14
SNX17-202ENST00000427123 CCDC144BQ3MJ40 725 aa22.16■■□□□ 1.14
SNX17-202ENST00000427123 BIN1O00499 593 aa22.15■■□□□ 1.14
SNX17-202ENST00000427123 PRPF3O43395 683 aaKnown RBP22.15■■□□□ 1.14
SNX17-202ENST00000427123 NEMFO60524 1076 aa22.15■■□□□ 1.14
SNX17-202ENST00000427123 PRDM1O75626 825 aa22.15■■□□□ 1.14
SNX17-202ENST00000427123 FUT2Q10981 343 aa22.15■■□□□ 1.14
SNX17-202ENST00000427123 SBK1Q52WX2 424 aa22.15■■□□□ 1.14
SNX17-202ENST00000427123 KCNH3Q9ULD8 1083 aa22.15■■□□□ 1.14
SNX17-202ENST00000427123 CEP131Q9UPN4 1083 aa22.15■■□□□ 1.14
SNX17-202ENST00000427123 SMTNL1A8MU46 457 aa22.14■■□□□ 1.14
SNX17-202ENST00000427123 GRAPQ13588 217 aa22.14■■□□□ 1.14
SNX17-202ENST00000427123 TRAPPC3LQ5T215 181 aa22.14■■□□□ 1.14
SNX17-202ENST00000427123 FAM182BQ5T319 152 aa22.14■■□□□ 1.14
SNX17-202ENST00000427123 ELOA2Q8IYF1 753 aaPredicted RBP22.14■■□□□ 1.14
SNX17-202ENST00000427123 GRAPLQ8TC17 118 aaPredicted RBP22.14■■□□□ 1.14
SNX17-202ENST00000427123 NR5A1Q13285 461 aa22.14■■□□□ 1.13
SNX17-202ENST00000427123 KRBA2Q6ZNG9 492 aa22.14■■□□□ 1.13
SNX17-202ENST00000427123 DZIP1Q86YF9 867 aaKnown RBP22.14■■□□□ 1.13
SNX17-202ENST00000427123 CACTINQ8WUQ7 758 aaKnown RBP22.14■■□□□ 1.13
SNX17-202ENST00000427123 FBXO2Q9UK22 296 aaPredicted RBP22.14■■□□□ 1.13
SNX17-202ENST00000427123 DYNC1I1O14576 645 aa22.13■■□□□ 1.13
SNX17-202ENST00000427123 PTPREP23469 700 aa22.13■■□□□ 1.13
SNX17-202ENST00000427123 TROAPQ12815 778 aa22.13■■□□□ 1.13
SNX17-202ENST00000427123 TXNRD3Q86VQ6 643 aa22.13■■□□□ 1.13
SNX17-202ENST00000427123 MYRIPQ8NFW9 859 aa22.13■■□□□ 1.13
SNX17-202ENST00000427123 FAM13BQ9NYF5 915 aa22.13■■□□□ 1.13
SNX17-202ENST00000427123 LEMD3Q9Y2U8 911 aa22.13■■□□□ 1.13
SNX17-202ENST00000427123 MORC2Q9Y6X9 1032 aaPredicted RBP22.13■■□□□ 1.13
SNX17-202ENST00000427123 IKBKBO14920 756 aa22.13■■□□□ 1.13
SNX17-202ENST00000427123 PKN1Q16512 942 aa22.13■■□□□ 1.13
SNX17-202ENST00000427123 ZNF579Q8NAF0 562 aaKnown RBP22.13■■□□□ 1.13
SNX17-202ENST00000427123 NFIXQ14938 502 aa22.12■■□□□ 1.13
SNX17-202ENST00000427123 TMTC3Q6ZXV5 915 aa22.12■■□□□ 1.13
SNX17-202ENST00000427123 CNBD1Q8NA66 436 aa22.12■■□□□ 1.13
SNX17-202ENST00000427123 CNNM3Q8NE01 707 aa22.12■■□□□ 1.13
SNX17-202ENST00000427123 OXER1Q8TDS5 423 aa22.12■■□□□ 1.13
SNX17-202ENST00000427123 PHF20Q9BVI0 1012 aa22.12■■□□□ 1.13
SNX17-202ENST00000427123 HOOK1Q9UJC3 728 aaKnown RBP22.12■■□□□ 1.13
SNX17-202ENST00000427123 PLEKHA8P1O95397 391 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 KRT2P35908 639 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 NT5C2P49902 561 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 PDE4BQ07343 736 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 PNOCQ13519 176 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 METTL16Q86W50 562 aaKnown RBP22.11■■□□□ 1.13
SNX17-202ENST00000427123 LRRC8AQ8IWT6 810 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 WDR66Q8TBY9 1149 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 ANKIB1Q9P2G1 1089 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 ADRA2BP18089 450 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 NCAPHQ15003 741 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 LONRF3Q496Y0 759 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 FAM196AQ6ZSG2 479 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 SHISA4Q96DD7 197 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 GJD4Q96KN9 370 aaPredicted RBP22.11■■□□□ 1.13
SNX17-202ENST00000427123 NOL10Q9BSC4 688 aaKnown RBP22.11■■□□□ 1.13
SNX17-202ENST00000427123 VPS54Q9P1Q0 977 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 PCDHB6Q9Y5E3 794 aa22.11■■□□□ 1.13
SNX17-202ENST00000427123 XDHP47989 1333 aa22.1■■□□□ 1.13
SNX17-202ENST00000427123 UBR3Q6ZT12 1888 aa22.1■■□□□ 1.13
SNX17-202ENST00000427123 NAV1Q8NEY1 1877 aa22.1■■□□□ 1.13
SNX17-202ENST00000427123 CTCFLQ8NI51 663 aaPredicted RBP22.1■■□□□ 1.13
SNX17-202ENST00000427123 IMPACTQ9P2X3 320 aa22.1■■□□□ 1.13
SNX17-202ENST00000427123 SRPRBQ9Y5M8 271 aaKnown RBP22.1■■□□□ 1.13
SNX17-202ENST00000427123 CNTNAP5Q8WYK1 1306 aa22.1■■□□□ 1.13
SNX17-202ENST00000427123 GSDMDP57764 484 aa22.09■■□□□ 1.13
SNX17-202ENST00000427123 BRMS1Q9HCU9 246 aa22.09■■□□□ 1.13
SNX17-202ENST00000427123 CABP5Q9NP86 173 aa22.09■■□□□ 1.13
SNX17-202ENST00000427123 LDHBP07195 334 aaKnown RBP22.09■■□□□ 1.13
SNX17-202ENST00000427123 CYP2D6P10635 497 aa22.09■■□□□ 1.13
SNX17-202ENST00000427123 EVX2Q03828 476 aa22.09■■□□□ 1.13
SNX17-202ENST00000427123 JAG2Q9Y219 1238 aa22.09■■□□□ 1.13
SNX17-202ENST00000427123 V9GY48 417 aaPredicted RBP22.09■■□□□ 1.13
SNX17-202ENST00000427123 RRP9O43818 475 aaKnown RBP22.08■■□□□ 1.13
SNX17-202ENST00000427123 GSTO1P78417 241 aa22.08■■□□□ 1.13
SNX17-202ENST00000427123 C15orf52Q6ZUT6 534 aaKnown RBP22.08■■□□□ 1.13
SNX17-202ENST00000427123 ZNF804AQ7Z570 1209 aa22.08■■□□□ 1.13
SNX17-202ENST00000427123 TRIM75PA6NK02 468 aa22.07■■□□□ 1.12
SNX17-202ENST00000427123 FAM47AQ5JRC9 791 aa22.07■■□□□ 1.12
SNX17-202ENST00000427123 OLFM4Q6UX06 510 aa22.07■■□□□ 1.12
SNX17-202ENST00000427123 OSBPL5Q9H0X9 879 aaPredicted RBP22.07■■□□□ 1.12
SNX17-202ENST00000427123 MCM9Q9NXL9 1143 aa22.07■■□□□ 1.12
SNX17-202ENST00000427123 ROBO3Q96MS0 1386 aa22.07■■□□□ 1.12
SNX17-202ENST00000427123 SMC2O95347 1197 aa22.07■■□□□ 1.12
SNX17-202ENST00000427123 BMP15O95972 392 aa22.07■■□□□ 1.12
SNX17-202ENST00000427123 GRIN1Q05586 938 aa22.07■■□□□ 1.12
SNX17-202ENST00000427123 FILIP1Q7Z7B0 1213 aa22.07■■□□□ 1.12
SNX17-202ENST00000427123 XPO4Q9C0E2 1151 aaKnown RBP22.07■■□□□ 1.12
SNX17-202ENST00000427123 TSPY2A6NKD2 308 aa22.06■■□□□ 1.12
SNX17-202ENST00000427123 NMT2O60551 498 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms